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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 29128334

Journal: Cell systems

Year of Publication: 2017

Title: A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling.

Author List: Malty RH., Aoki H., Kumar A., Phanse S., Amin S., Zhang Q., Minic Z., Goebels F., Musso G., Wu Z., Abou-Tok H., Meyer M., Deineko V., Kassir S., Sidhu V., Jessulat M., Scott NE., Xiong X., Vlasblom J., Prasad B., Foster LJ., Alberio T., Garavaglia B., Yu H., Bader GD., Nakamura K., Parkinson J., Babu M.

Cross References:

Annotations:

Topic
Text
Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases.

Experiment (13 interactions)

Accession: EBI-20308207

Name: malty-2017-10

Host organism: Homo sapiens SH-SY5Y cell line

Organism: Homo sapiens SH-SY5Y cell line

Accession: EBI-307865

Name: human-sh_sy5y

Description: Homo sapiens SH-SY5Y cell line

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Interaction Detection Method: crosslink

Interaction detection method: crosslink
Accession: EBI-1049

Name: crosslink

Description: cross-linking study

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0030
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Analysis of complexes obtained by input of energy or chemical treatments, or by introducing cysteines followed by oxidation to promote the formation of covalent bonds among molecules in close proximity.


Participant Identification Method: sequence tag

Participant identification method: sequence tag
Accession: EBI-81

Name: sequence tag

Description: sequence tag identification

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
11805837
-
see-also
psi-mi
MI:0102
-
identity
pubmed
10967324
-
primary-reference
pubmed
11752590
-
primary-reference


Annotations:
Topic
Text
definition
This approach leads to protein identification by combining mass measurement and short amino acid sequence information obtained by tandem mass spectrometry. This information is then used to automatically find the best match in a sequence database. A mixture of peptides derived from a protease digestion is analysed by nanoelectrospray LC-MS/MS (Liquid Chromatography Tandem Mass Spectrometer or nanoESI MS/MS) mass spectrometry. Electrospray mass spectrometry cannot be applied to dilute samples and is affected by high salt. As a consequence peptides, normally extracted from acrylamide gels by in situ proteolysis, are desalted and concentrated on a microcolumn followed by elution into a capillary used for nanoelectrospray tandem mass spectrometry. A first mass spectrum (Normal mass spectrum or Q1 mass spectrum) gives information about the masses of all the peptides. Peptides observed in the normal mass spectrum are isolated in turn and dissociated into fragments by collision with gas molecules within the mass spectrometer. Some of the fragments obtained from a peptide constitute a nested set, differing by one amino acid, and the mass difference between them allows assignment of a partial sequence. The masses of the fragments define the position of the partial sequence in the peptide. Together with the cleavage specificity of the protease used to cleave the protein, and mass information such sequence tag provides much higher search specificity to match the a database entry. The procedure is repeated with several peptides from the digest, resulting in multiple identifications of the same protein or identification of several proteins from the peptide mixture. Unknown proteins can easily be identified by using the high specificity of the peptide sequence tag for searches in most sequence databases including EST or genome databases.


Cross References:

Annotations:

Topic
Text
after cross-linking anti bait coip was performed
imex curation
Only protein-protein interactions
imex curation
mohan.babu@uregina.ca

Interaction

Accession: EBI-20309284

Name: pdha1-acat1-1

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0914
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
Table S1

Participants (132)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp1234567pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp1234567pp
1
EBI-715747
 logo
PDHA1
PHE1A
PDHE1-A type I
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Accession: EBI-20309287

Name: EBI-715747

P
Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Accession: EBI-20309287

Name: EBI-715747

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Accession: EBI-20309287

Name: EBI-715747

Stoichiometry: 0.0

F
Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Accession: EBI-20309287

Name: EBI-715747

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Participant: Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

Accession: EBI-20309287

Name: EBI-715747

Confidences:

Type
Value
No records found.

2
EBI-750650
 logo
HIST2H3A
HIST2H3C
HIST2H3D

[+4]
Histone H3.2
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H3.2

Participant: Histone H3.2

Accession: EBI-20309289

Name: EBI-750650

P
Participant: Histone H3.2

Participant: Histone H3.2

Accession: EBI-20309289

Name: EBI-750650

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H3.2

Participant: Histone H3.2

Accession: EBI-20309289

Name: EBI-750650

Stoichiometry: 0.0

F
Participant: Histone H3.2

Participant: Histone H3.2

Accession: EBI-20309289

Name: EBI-750650

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H3.2

Participant: Histone H3.2

Accession: EBI-20309289

Name: EBI-750650

Confidences:

Type
Value
No records found.

3
EBI-438408
 logo
RPL32
Large ribosomal subunit protein eL32
PP9932
60S ribosomal protein L32
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L32

Participant: 60S ribosomal protein L32

Accession: EBI-20309291

Name: EBI-438408

P
Participant: 60S ribosomal protein L32

Participant: 60S ribosomal protein L32

Accession: EBI-20309291

Name: EBI-438408

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L32

Participant: 60S ribosomal protein L32

Accession: EBI-20309291

Name: EBI-438408

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L32

Participant: 60S ribosomal protein L32

Accession: EBI-20309291

Name: EBI-438408

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L32

Participant: 60S ribosomal protein L32

Accession: EBI-20309291

Name: EBI-438408

Confidences:

Type
Value
No records found.

4
EBI-358900
 logo
HIST3H3
H3/g
H3FT
Histone H3.1t
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H3.1t

Participant: Histone H3.1t

Accession: EBI-20309293

Name: EBI-358900

P
Participant: Histone H3.1t

Participant: Histone H3.1t

Accession: EBI-20309293

Name: EBI-358900

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H3.1t

Participant: Histone H3.1t

Accession: EBI-20309293

Name: EBI-358900

Stoichiometry: 0.0

F
Participant: Histone H3.1t

Participant: Histone H3.1t

Accession: EBI-20309293

Name: EBI-358900

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H3.1t

Participant: Histone H3.1t

Accession: EBI-20309293

Name: EBI-358900

Confidences:

Type
Value
No records found.

5
EBI-358971
 logo
HIST1H2AB
HIST1H2AE
Histone H2A.2

[+4]
Histone H2A type 1-B/E
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H2A type 1-B/E

Participant: Histone H2A type 1-B/E

Accession: EBI-20309295

Name: EBI-358971

P
Participant: Histone H2A type 1-B/E

Participant: Histone H2A type 1-B/E

Accession: EBI-20309295

Name: EBI-358971

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H2A type 1-B/E

Participant: Histone H2A type 1-B/E

Accession: EBI-20309295

Name: EBI-358971

Stoichiometry: 0.0

F
Participant: Histone H2A type 1-B/E

Participant: Histone H2A type 1-B/E

Accession: EBI-20309295

Name: EBI-358971

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H2A type 1-B/E

Participant: Histone H2A type 1-B/E

Accession: EBI-20309295

Name: EBI-358971

Confidences:

Type
Value
No records found.

6
EBI-120658
 logo
H3F3B
H3F3A
H3.3B

[+3]
Histone H3.3
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H3.3

Participant: Histone H3.3

Accession: EBI-20309297

Name: EBI-120658

P
Participant: Histone H3.3

Participant: Histone H3.3

Accession: EBI-20309297

Name: EBI-120658

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H3.3

Participant: Histone H3.3

Accession: EBI-20309297

Name: EBI-120658

Stoichiometry: 0.0

F
Participant: Histone H3.3

Participant: Histone H3.3

Accession: EBI-20309297

Name: EBI-120658

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H3.3

Participant: Histone H3.3

Accession: EBI-20309297

Name: EBI-120658

Confidences:

Type
Value
No records found.

7
EBI-366357
 logo
RPL28
Large ribosomal subunit protein eL28
60S ribosomal protein L28
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L28

Participant: 60S ribosomal protein L28

Accession: EBI-20309299

Name: EBI-366357

P
Participant: 60S ribosomal protein L28

Participant: 60S ribosomal protein L28

Accession: EBI-20309299

Name: EBI-366357

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L28

Participant: 60S ribosomal protein L28

Accession: EBI-20309299

Name: EBI-366357

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L28

Participant: 60S ribosomal protein L28

Accession: EBI-20309299

Name: EBI-366357

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L28

Participant: 60S ribosomal protein L28

Accession: EBI-20309299

Name: EBI-366357

Confidences:

Type
Value
No records found.

8
EBI-1044428
 logo
STOML2
Paraprotein target 7
SLP2

[+2]
Stomatin-like protein 2, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Stomatin-like protein 2, mitochondrial

Participant: Stomatin-like protein 2, mitochondrial

Accession: EBI-20309301

Name: EBI-1044428

P
Participant: Stomatin-like protein 2, mitochondrial

Participant: Stomatin-like protein 2, mitochondrial

Accession: EBI-20309301

Name: EBI-1044428

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Stomatin-like protein 2, mitochondrial

Participant: Stomatin-like protein 2, mitochondrial

Accession: EBI-20309301

Name: EBI-1044428

Stoichiometry: 0.0

F
Participant: Stomatin-like protein 2, mitochondrial

Participant: Stomatin-like protein 2, mitochondrial

Accession: EBI-20309301

Name: EBI-1044428

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Stomatin-like protein 2, mitochondrial

Participant: Stomatin-like protein 2, mitochondrial

Accession: EBI-20309301

Name: EBI-1044428

Confidences:

Type
Value
No records found.

9
EBI-702400
 logo
CKAP4
63-kDa cytoskeleton-linking membrane protein
Cytoskeleton-associated protein 4
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Cytoskeleton-associated protein 4

Participant: Cytoskeleton-associated protein 4

Accession: EBI-20309303

Name: EBI-702400

P
Participant: Cytoskeleton-associated protein 4

Participant: Cytoskeleton-associated protein 4

Accession: EBI-20309303

Name: EBI-702400

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Cytoskeleton-associated protein 4

Participant: Cytoskeleton-associated protein 4

Accession: EBI-20309303

Name: EBI-702400

Stoichiometry: 0.0

F
Participant: Cytoskeleton-associated protein 4

Participant: Cytoskeleton-associated protein 4

Accession: EBI-20309303

Name: EBI-702400

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Cytoskeleton-associated protein 4

Participant: Cytoskeleton-associated protein 4

Accession: EBI-20309303

Name: EBI-702400

Confidences:

Type
Value
No records found.

10
EBI-79722
 logo
HIST1H3D
HIST1H3J
HIST1H3I

[+27]
Histone H3.1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H3.1

Participant: Histone H3.1

Accession: EBI-20309305

Name: EBI-79722

P
Participant: Histone H3.1

Participant: Histone H3.1

Accession: EBI-20309305

Name: EBI-79722

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H3.1

Participant: Histone H3.1

Accession: EBI-20309305

Name: EBI-79722

Stoichiometry: 0.0

F
Participant: Histone H3.1

Participant: Histone H3.1

Accession: EBI-20309305

Name: EBI-79722

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H3.1

Participant: Histone H3.1

Accession: EBI-20309305

Name: EBI-79722

Confidences:

Type
Value
No records found.

11
EBI-721232
 logo
MDH2
Malate dehydrogenase, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Malate dehydrogenase, mitochondrial

Participant: Malate dehydrogenase, mitochondrial

Accession: EBI-20309307

Name: EBI-721232

P
Participant: Malate dehydrogenase, mitochondrial

Participant: Malate dehydrogenase, mitochondrial

Accession: EBI-20309307

Name: EBI-721232

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Malate dehydrogenase, mitochondrial

Participant: Malate dehydrogenase, mitochondrial

Accession: EBI-20309307

Name: EBI-721232

Stoichiometry: 0.0

F
Participant: Malate dehydrogenase, mitochondrial

Participant: Malate dehydrogenase, mitochondrial

Accession: EBI-20309307

Name: EBI-721232

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Malate dehydrogenase, mitochondrial

Participant: Malate dehydrogenase, mitochondrial

Accession: EBI-20309307

Name: EBI-721232

Confidences:

Type
Value
No records found.

12
EBI-711404
 logo
FUBP1
DNA helicase V
Far upstream element-binding protein 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Far upstream element-binding protein 1

Participant: Far upstream element-binding protein 1

Accession: EBI-20309309

Name: EBI-711404

P
Participant: Far upstream element-binding protein 1

Participant: Far upstream element-binding protein 1

Accession: EBI-20309309

Name: EBI-711404

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Far upstream element-binding protein 1

Participant: Far upstream element-binding protein 1

Accession: EBI-20309309

Name: EBI-711404

Stoichiometry: 0.0

F
Participant: Far upstream element-binding protein 1

Participant: Far upstream element-binding protein 1

Accession: EBI-20309309

Name: EBI-711404

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Far upstream element-binding protein 1

Participant: Far upstream element-binding protein 1

Accession: EBI-20309309

Name: EBI-711404

Confidences:

Type
Value
No records found.

13
EBI-347794
 logo
CHTOP
Small arginine- and glycine-rich protein
Friend of PRMT1 protein

[+4]
Chromatin target of PRMT1 protein
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Chromatin target of PRMT1 protein

Participant: Chromatin target of PRMT1 protein

Accession: EBI-20309311

Name: EBI-347794

P
Participant: Chromatin target of PRMT1 protein

Participant: Chromatin target of PRMT1 protein

Accession: EBI-20309311

Name: EBI-347794

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Chromatin target of PRMT1 protein

Participant: Chromatin target of PRMT1 protein

Accession: EBI-20309311

Name: EBI-347794

Stoichiometry: 0.0

F
Participant: Chromatin target of PRMT1 protein

Participant: Chromatin target of PRMT1 protein

Accession: EBI-20309311

Name: EBI-347794

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Chromatin target of PRMT1 protein

Participant: Chromatin target of PRMT1 protein

Accession: EBI-20309311

Name: EBI-347794

Confidences:

Type
Value
No records found.

14
EBI-353116
 logo
RPL30
Large ribosomal subunit protein eL30
60S ribosomal protein L30
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L30

Participant: 60S ribosomal protein L30

Accession: EBI-20309313

Name: EBI-353116

P
Participant: 60S ribosomal protein L30

Participant: 60S ribosomal protein L30

Accession: EBI-20309313

Name: EBI-353116

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L30

Participant: 60S ribosomal protein L30

Accession: EBI-20309313

Name: EBI-353116

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L30

Participant: 60S ribosomal protein L30

Accession: EBI-20309313

Name: EBI-353116

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L30

Participant: 60S ribosomal protein L30

Accession: EBI-20309313

Name: EBI-353116

Confidences:

Type
Value
No records found.

15
EBI-351394
 logo
DBN1
D0S117E
Developmentally-regulated brain protein
Drebrin
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Drebrin

Participant: Drebrin

Accession: EBI-20309315

Name: EBI-351394

P
Participant: Drebrin

Participant: Drebrin

Accession: EBI-20309315

Name: EBI-351394

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Drebrin

Participant: Drebrin

Accession: EBI-20309315

Name: EBI-351394

Stoichiometry: 0.0

F
Participant: Drebrin

Participant: Drebrin

Accession: EBI-20309315

Name: EBI-351394

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Drebrin

Participant: Drebrin

Accession: EBI-20309315

Name: EBI-351394

Confidences:

Type
Value
No records found.

16
EBI-355861
 logo
SFXN1
Sideroflexin-1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Sideroflexin-1

Participant: Sideroflexin-1

Accession: EBI-20309317

Name: EBI-355861

P
Participant: Sideroflexin-1

Participant: Sideroflexin-1

Accession: EBI-20309317

Name: EBI-355861

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Sideroflexin-1

Participant: Sideroflexin-1

Accession: EBI-20309317

Name: EBI-355861

Stoichiometry: 0.0

F
Participant: Sideroflexin-1

Participant: Sideroflexin-1

Accession: EBI-20309317

Name: EBI-355861

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Sideroflexin-1

Participant: Sideroflexin-1

Accession: EBI-20309317

Name: EBI-355861

Confidences:

Type
Value
No records found.

17
EBI-352743
 logo
RPL12
Large ribosomal subunit protein uL11
60S ribosomal protein L12
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L12

Participant: 60S ribosomal protein L12

Accession: EBI-20309319

Name: EBI-352743

P
Participant: 60S ribosomal protein L12

Participant: 60S ribosomal protein L12

Accession: EBI-20309319

Name: EBI-352743

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L12

Participant: 60S ribosomal protein L12

Accession: EBI-20309319

Name: EBI-352743

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L12

Participant: 60S ribosomal protein L12

Accession: EBI-20309319

Name: EBI-352743

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L12

Participant: 60S ribosomal protein L12

Accession: EBI-20309319

Name: EBI-352743

Confidences:

Type
Value
No records found.

18
EBI-2555365
 logo
PHF5A
Splicing factor 3B-associated 14 kDa protein
PHD finger-like domain-containing protein 5A
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: PHD finger-like domain-containing protein 5A

Participant: PHD finger-like domain-containing protein 5A

Accession: EBI-20309321

Name: EBI-2555365

P
Participant: PHD finger-like domain-containing protein 5A

Participant: PHD finger-like domain-containing protein 5A

Accession: EBI-20309321

Name: EBI-2555365

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: PHD finger-like domain-containing protein 5A

Participant: PHD finger-like domain-containing protein 5A

Accession: EBI-20309321

Name: EBI-2555365

Stoichiometry: 0.0

F
Participant: PHD finger-like domain-containing protein 5A

Participant: PHD finger-like domain-containing protein 5A

Accession: EBI-20309321

Name: EBI-2555365

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: PHD finger-like domain-containing protein 5A

Participant: PHD finger-like domain-containing protein 5A

Accession: EBI-20309321

Name: EBI-2555365

Confidences:

Type
Value
No records found.

19
EBI-725224
 logo
H1F0
Histone H1'
H1FV

[+1]
Histone H1.0
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Histone H1.0

Participant: Histone H1.0

Accession: EBI-20309323

Name: EBI-725224

P
Participant: Histone H1.0

Participant: Histone H1.0

Accession: EBI-20309323

Name: EBI-725224

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Histone H1.0

Participant: Histone H1.0

Accession: EBI-20309323

Name: EBI-725224

Stoichiometry: 0.0

F
Participant: Histone H1.0

Participant: Histone H1.0

Accession: EBI-20309323

Name: EBI-725224

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Histone H1.0

Participant: Histone H1.0

Accession: EBI-20309323

Name: EBI-725224

Confidences:

Type
Value
No records found.

20
EBI-352007
 logo
ATAD3A
ATPase family AAA domain-containing protein 3A
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
so
SO:0000358
-
see-also
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: ATPase family AAA domain-containing protein 3A

Participant: ATPase family AAA domain-containing protein 3A

Accession: EBI-20309325

Name: EBI-352007

P
Participant: ATPase family AAA domain-containing protein 3A

Participant: ATPase family AAA domain-containing protein 3A

Accession: EBI-20309325

Name: EBI-352007

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: ATPase family AAA domain-containing protein 3A

Participant: ATPase family AAA domain-containing protein 3A

Accession: EBI-20309325

Name: EBI-352007

Stoichiometry: 0.0

F
Participant: ATPase family AAA domain-containing protein 3A

Participant: ATPase family AAA domain-containing protein 3A

Accession: EBI-20309325

Name: EBI-352007

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: ATPase family AAA domain-containing protein 3A

Participant: ATPase family AAA domain-containing protein 3A

Accession: EBI-20309325

Name: EBI-352007

Confidences:

Type
Value
No records found.