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What is this view?

Binary interactions

In this tab, we display the list of interactions that you have selected using one of our search features. Despite the fact that our data are annotated to accurately reflect the interactions reported in scientific literature, the data is shown in this view as binary interactions. Whenever the data was reported as a co-complex involving more than two molecules, we store it as such in the IntAct database and post-process it so the portal can show it as binary interaction. This post-processing is the Spoke Expansion model (connects bait to all preys):



sourceExp

At any moment you can choose to display the expansion column in this view in order to see which interaction are spoke expanded and which are not.

Description of what has changed

  • We have added more download options to allow users to retrieve their interaction set using more standard formats such as PSI-MI XML and PSIMITAB (version 2.5, 2.6 or 2.7) but also XGMML, RDF and Biopax (level 2 and 3).
  • We have now four different table views : minimal(molecule names and interaction AC), basic (minimal + molecule links, interaction detection method, negative), standard(minimal + molecule species, confidences, publication details, experiment details), expanded (standard + more experiment details) and complete (all mitab 2.7 columns).

Configuring the view to your need"

In the header of the interaction table you will find a button: ‘Change Column Display’ that will show you all the columns/Table views available and allow you to update the current selected set.

Downloading the data into Standard formats"

In the header of the interaction table you will find a drop down list that contains all the formats currently supported when downloading the interaction data. Select one of them and click the export button next to the list. Please note that PSI-MI XML is only available when the interaction set is no bigger than 1000 interactions.

Opening the interaction details"

Clicking on the magnifying glass in the first column of the interaction table will open the details of the corresponding interaction in the Interaction Details tab, giving you access to more details of the manually curated record.

What is this view?

Browsing (Browse Tab)

This tab is meant to give you access to more content based on the currently selected set of interactions. Please note that linking to third party resources will only include up to 200 molecules , if you exceed this number you will see the warning icon (This number has been reduced to 125 molecules for mRNA expression). Now let’s look at the features available to you:

Limiting the scope of the current dataset with the Uniprot Taxonomy ontology

Allows users to browse the Uniprot Taxonomy hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the GO ontology

Allows users to browse the GO hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Limiting the scope of the current dataset with the ChEBI ontology

Allows users to browse the ChEBI hierarchy as a tree and select terms in order to narrow down their dataset. Once a term is selected, you are taken back to the interaction tab to review your dataset.

Bulk linking to third party resources by using involved proteins

  • Proteins by Reactome pathway: Sends your proteins to the Reactome SkyPainter that will show you the pathways in which these molecules are know to play a role.
  • Proteins by Chromosomal location: Sends your list of proteins to Ensembl’s Karyotype viewer and overlays the proteins on the chromosomes.
  • Proteins by mRNA expression: Sends your set of proteins to the ArrayExpress Atlas that will show the known gene expression based on experimental studies.
What is this view?

Searching Interactions (Search Tab)

As you can see in this tab we are now trying to give you more targeted choice to do your queries, please note that the examples provided in this tab are live links so you can simply click them to see the resulting interactions sets.

Using the Quick Search

In this search panel you are free to type anything that might relate to interactions, whether it is properties of their interactor (gene name, identifiers, GO term…) or more specific to the interaction like publication, authors, experimental detection method, ...

Some examples:

  • Try the query: imatinib
    This is a drug for which we have curated a number of interactions.
    Once you press the search button you should be taken to the Interaction Tab that lists 130 binary interactions.
    If you want to construct more complex queries we recommend you take a look at the Molecular Interaction Query Language, accessible from the quick search panel.
  • Try the query: species:yeast AND type:"direct interaction"
    This query selects all interactions involving yeast interactors that have been shown to have direct interactions. If you customize the column display of the interaction tab, you will see that not only “direct interaction” have been selected but also children terms in the PSI-MI ontology.

Using the Ontology Search

Open the Rearch Tab. This panel is specialised to give you an easy access to ontology search. So far you can search on 4 ontologies:

  • Gene Ontology
  • InterPro
  • PSI-MI
  • ChEBI

Whenever you start typing a query in this search panel, the system will search as you type and propose a list of matching controlled vocabulary terms. You can then select one of them and select matching interactions.

For example, type: cancer
You will be presented with a few choices, please note that each term is followed by the count of matching interactions in the IntAct database.

Select a term with the mouse or using the keyboard cursor keys and you will be taken to the interaction tab.

Searching the Compound chemical structure

In this panel you will be able to draw all or part of a chemical structure and search for chemical compounds. If you get any matched, you can then see all interactions involving them.

First you have to open up the chemical search panel so that the applet can load, it might take a few seconds. Then you can start drawing your structure, for instance:

Once you have drawn your structure, select Similarity and press Search. You should be presented with a list of matching compound. Now choose one molecule and click the link: IntAct interactions. You will be taken to the interaction tab to review the data.

Complex Expansion

Binary interactions generated by co-complex expansion

Why should you care about complex expansion ?

Some experimental methods such as Tandem Affinity Purification do generate molecular interactions that can involve more than 2 molecules. Despite the fact that IntAct curation team do capture the molecular interaction as they were reported in the corresponding experiment, when you search using the intact web site, the results of your query is always shown as set of binary interactions (i.e. 2 molecules). We would like to draw your attention on the fact that whenever the reported interaction was a co-complex we do apply an expansion algorithm that transform this n-ary interaction into a set of binary interactions. While none of these agorithms is perfect and will very likely generate some false positive interactions, it is useful to present the data in a consistent manner. Bear in mind that we will strive to differentiate in the search results which interactions are a real experimental binary from expanded ones.

Existing expansion algorithm

There are several known algorithm allowing to transform an n-ary interaction into a set of binaries. The illustration below present the two well known expansion model and illustrates why they can be incorrect.



sourceExp

  • Spoke expansion: Links the bait molecule to all prey molecules. If N is the count of molecule in the complex, it generated N-1 binary interactions.
  • Matrix expansion: Links all molecule to all other molecule present in the complex. If N is the count of molecule in the complex, it generated (N*(N-1))/2 binary interactions.

Now the issue (as illustrated at the bottom right of the diagram above) with these two models lies in the fact that the real complex might not be articulated around the experimental bait but instead, this bait might be linked to a smaller complex, hence most binary interaction generated by spoke and matrix expansion result in false positive.



PSICQUIC

How is the number of interactions in other databases obtained?

PSICQUIC is a standard way to access molecular interaction databases across which it repeats the same query. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the PSICQUIC View, where you can browse the results in those other resources.

The services currently active are:

Check the PSICQUIC site for more information.

IMEx

What is the significance of the IMEx dataset?"

IMEx is a network of databases which have agreed to supply a non-redundant set of data expertly manually annotated to the same consistent detailed standard which, as such, represents a high-quality subset of the data each individually provides. The number of databases providing data may vary, depending on the status of their services and only those that are active are used in this query. By clicking on the number of interactions you will be redirected to the IMEx View, where you can browse the results in those other resources.

The services currently active are:

Check the IMEx site for more information.

What is this view?

Representation of Experimental Features

This section shows the graphical representation of experimental features, where each participant is represented as a white rectangle with a black border and a line for each hundredth amino acid. All available features are attached to their associated participant and their categories are represented in the right side of the legend. The left side of the legend dynamically shows the range statuses occuring in the shown interaction. These are the possible range statuses:

sourceExp

Interacting with the widget

Hover over a feature to see more information in a tooltip.
sourceExp

To display a single interacting region click on it and click again to display all interacting regions.
Displaying all interacting regionsDisplaying one interacting region
sourceExpsourceExp
What is this view?

Dynamic molecular interaction data

This section shows the graphical representation of dynamic molecular interactions. By default it displays all the interactions from one experiment using radio buttons to allow users to highlight interactions in different variable conditions.

Publication

PubMed Id: 25609649

Journal: Mol. Syst. Biol.

Year of Publication: 2015

Title: Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

Author List: Li X., Wang W., Wang J., Malovannaya A., Xi Y., Li W., Guerra R., Hawke D.H., Qin J., Chen J.

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Experiment (1 interaction)

Accession: EBI-11324700

Name: li-2015-6

Host organism: Homo sapiens 293 cells transformed with SV40 large T antigen

Organism: Homo sapiens 293 cells transformed with SV40 large T antigen

Accession: EBI-308002

Name: human-293t

Description: Homo sapiens 293 cells transformed with SV40 large T antigen

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human
-

Interaction Detection Method: anti bait coip

Interaction detection method: anti bait coip
Accession: EBI-976

Name: anti bait coip

Description: anti bait coimmunoprecipitation

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0006
-
identity
pubmed
7708014
-
primary-reference


Annotations:
Topic
Text
definition
A specific antibody for the molecule of interest (bait) is available, this is used to generate a high affinity resin to capture the endogenous bait present in a sample.


Participant Identification Method: ms participant

Participant identification method: ms participant
Accession: EBI-608794

Name: ms participant

Description: Identification by mass spectrometry

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0427
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
identification by mass spectrometry.


Cross References:

Annotations:

Topic
Text
imex curation
jchen8@mdanderson.org
Only protein-protein interactions
imex curation

Interaction

Accession: EBI-11324725

Name: jun-aasdhppt-1

Description: -

Type: association

Interaction type: association
Accession: EBI-1813191

Name: association

Description: association

Cross References:
Database
Identifier
Secondary identifier
Qualifier
pubmed
14755292
-
primary-reference
psi-mi
MI:0914
-
identity


Annotations:
Topic
Text
definition
Interaction between molecules that may participate in formation of one, but possibly more, physical complexes. Often describes a set of molecules that are co-purified in a single pull-down or coimmunoprecipitation but might participate in formation of distinct physical complexes sharing a common bait.


Cross References:

Database
Identifier
Secondary identifier
Qualifier
-
-

Annotations:

Topic
Text
ST9
To confirm that these fraction‐specific complex formations truly reflect the endogenous situation, we further conducted endogenous JUN purifications in chromatin and soluble fractions (Supplementary Table S9). 65% high‐confident interactions identified by our tagged TAP/MS have been confirmed by these AP/MS using antibodies against endogenous JUN.
Soluble fraction

Participants (1075)

Legend:
A
Annotation and Cross Reference  
P
Experimental Parameter   
S
Stoichiometry   
F
Experimental Feature
C
Participant Confidence
pp12345678910pp
#
Name
Links
Primary Identifier
Aliases
Description
Species
Expression system
Experimental role
Biological role
Interactor type
More...
pp12345678910pp
1
EBI-852823
 logo
JUN
Activator protein 1
Proto-oncogene c-Jun

[+2]
Transcription factor AP-1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
bait
Experimental role: bait
Accession: EBI-49

Name: bait

Description: bait

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0496
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally treated to capture its interacting partners.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transcription factor AP-1

Participant: Transcription factor AP-1

Accession: EBI-11325940

Name: EBI-852823

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Transcription factor AP-1

Participant: Transcription factor AP-1

Accession: EBI-11325940

Name: EBI-852823

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transcription factor AP-1

Participant: Transcription factor AP-1

Accession: EBI-11325940

Name: EBI-852823

Stoichiometry: 0.0

F
Participant: Transcription factor AP-1

Participant: Transcription factor AP-1

Accession: EBI-11325940

Name: EBI-852823

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transcription factor AP-1

Participant: Transcription factor AP-1

Accession: EBI-11325940

Name: EBI-852823

Confidences:

Type
Value
No records found.

2
EBI-299674
 logo
HNRNPD
AUF1
HNRPD

[+1]
Heterogeneous nuclear ribonucleoprotein D0
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Heterogeneous nuclear ribonucleoprotein D0

Participant: Heterogeneous nuclear ribonucleoprotein D0

Accession: EBI-11324790

Name: EBI-299674

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Heterogeneous nuclear ribonucleoprotein D0

Participant: Heterogeneous nuclear ribonucleoprotein D0

Accession: EBI-11324790

Name: EBI-299674

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Heterogeneous nuclear ribonucleoprotein D0

Participant: Heterogeneous nuclear ribonucleoprotein D0

Accession: EBI-11324790

Name: EBI-299674

Stoichiometry: 0.0

F
Participant: Heterogeneous nuclear ribonucleoprotein D0

Participant: Heterogeneous nuclear ribonucleoprotein D0

Accession: EBI-11324790

Name: EBI-299674

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Heterogeneous nuclear ribonucleoprotein D0

Participant: Heterogeneous nuclear ribonucleoprotein D0

Accession: EBI-11324790

Name: EBI-299674

Confidences:

Type
Value
No records found.

3
EBI-1237106
 logo
RNH1
PRI
RNH

[+2]
Ribonuclease inhibitor
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Ribonuclease inhibitor

Participant: Ribonuclease inhibitor

Accession: EBI-11324792

Name: EBI-1237106

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Ribonuclease inhibitor

Participant: Ribonuclease inhibitor

Accession: EBI-11324792

Name: EBI-1237106

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Ribonuclease inhibitor

Participant: Ribonuclease inhibitor

Accession: EBI-11324792

Name: EBI-1237106

Stoichiometry: 0.0

F
Participant: Ribonuclease inhibitor

Participant: Ribonuclease inhibitor

Accession: EBI-11324792

Name: EBI-1237106

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Ribonuclease inhibitor

Participant: Ribonuclease inhibitor

Accession: EBI-11324792

Name: EBI-1237106

Confidences:

Type
Value
No records found.

4
EBI-1057733
 logo
TMEM109
Mitsugumin-23
Transmembrane protein 109
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Transmembrane protein 109

Participant: Transmembrane protein 109

Accession: EBI-11324794

Name: EBI-1057733

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Transmembrane protein 109

Participant: Transmembrane protein 109

Accession: EBI-11324794

Name: EBI-1057733

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Transmembrane protein 109

Participant: Transmembrane protein 109

Accession: EBI-11324794

Name: EBI-1057733

Stoichiometry: 0.0

F
Participant: Transmembrane protein 109

Participant: Transmembrane protein 109

Accession: EBI-11324794

Name: EBI-1057733

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Transmembrane protein 109

Participant: Transmembrane protein 109

Accession: EBI-11324794

Name: EBI-1057733

Confidences:

Type
Value
No records found.

5
EBI-1052408
 logo
RPL7L1
Large ribosomal subunit protein uL30-like 1
60S ribosomal protein L7-like 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 60S ribosomal protein L7-like 1

Participant: 60S ribosomal protein L7-like 1

Accession: EBI-11324796

Name: EBI-1052408

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: 60S ribosomal protein L7-like 1

Participant: 60S ribosomal protein L7-like 1

Accession: EBI-11324796

Name: EBI-1052408

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 60S ribosomal protein L7-like 1

Participant: 60S ribosomal protein L7-like 1

Accession: EBI-11324796

Name: EBI-1052408

Stoichiometry: 0.0

F
Participant: 60S ribosomal protein L7-like 1

Participant: 60S ribosomal protein L7-like 1

Accession: EBI-11324796

Name: EBI-1052408

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 60S ribosomal protein L7-like 1

Participant: 60S ribosomal protein L7-like 1

Accession: EBI-11324796

Name: EBI-1052408

Confidences:

Type
Value
No records found.

6
EBI-1364
 logo
SAM68
Src-associated in mitosis 68 kDa protein
KHDRBS1

[+3]
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Accession: EBI-11324798

Name: EBI-1364

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Accession: EBI-11324798

Name: EBI-1364

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Accession: EBI-11324798

Name: EBI-1364

Stoichiometry: 0.0

F
Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Accession: EBI-11324798

Name: EBI-1364

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Participant: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Accession: EBI-11324798

Name: EBI-1364

Confidences:

Type
Value
No records found.

7
EBI-372844
 logo
PABPC4
APP1
PABP4

[+2]
Polyadenylate-binding protein 4
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Polyadenylate-binding protein 4

Participant: Polyadenylate-binding protein 4

Accession: EBI-11324800

Name: EBI-372844

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Polyadenylate-binding protein 4

Participant: Polyadenylate-binding protein 4

Accession: EBI-11324800

Name: EBI-372844

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Polyadenylate-binding protein 4

Participant: Polyadenylate-binding protein 4

Accession: EBI-11324800

Name: EBI-372844

Stoichiometry: 0.0

F
Participant: Polyadenylate-binding protein 4

Participant: Polyadenylate-binding protein 4

Accession: EBI-11324800

Name: EBI-372844

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Polyadenylate-binding protein 4

Participant: Polyadenylate-binding protein 4

Accession: EBI-11324800

Name: EBI-372844

Confidences:

Type
Value
No records found.

8
EBI-351257
 logo
DDX6
HLR2
RCK

[+3]
Probable ATP-dependent RNA helicase DDX6
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Probable ATP-dependent RNA helicase DDX6

Participant: Probable ATP-dependent RNA helicase DDX6

Accession: EBI-11324802

Name: EBI-351257

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Probable ATP-dependent RNA helicase DDX6

Participant: Probable ATP-dependent RNA helicase DDX6

Accession: EBI-11324802

Name: EBI-351257

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Probable ATP-dependent RNA helicase DDX6

Participant: Probable ATP-dependent RNA helicase DDX6

Accession: EBI-11324802

Name: EBI-351257

Stoichiometry: 0.0

F
Participant: Probable ATP-dependent RNA helicase DDX6

Participant: Probable ATP-dependent RNA helicase DDX6

Accession: EBI-11324802

Name: EBI-351257

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Probable ATP-dependent RNA helicase DDX6

Participant: Probable ATP-dependent RNA helicase DDX6

Accession: EBI-11324802

Name: EBI-351257

Confidences:

Type
Value
No records found.

9
EBI-2561395
 logo
PCMTD1
Protein-L-isoaspartate O-methyltransferase domain-containing protein 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Accession: EBI-11324804

Name: EBI-2561395

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Accession: EBI-11324804

Name: EBI-2561395

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Accession: EBI-11324804

Name: EBI-2561395

Stoichiometry: 0.0

F
Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Accession: EBI-11324804

Name: EBI-2561395

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Participant: Protein-L-isoaspartate O-methyltransferase domain-containing protein 1

Accession: EBI-11324804

Name: EBI-2561395

Confidences:

Type
Value
No records found.

10
EBI-1054287
 logo
MRPS5
Mitochondrial small ribosomal subunit protein uS5m
28S ribosomal protein S5, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 28S ribosomal protein S5, mitochondrial

Participant: 28S ribosomal protein S5, mitochondrial

Accession: EBI-11324806

Name: EBI-1054287

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: 28S ribosomal protein S5, mitochondrial

Participant: 28S ribosomal protein S5, mitochondrial

Accession: EBI-11324806

Name: EBI-1054287

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 28S ribosomal protein S5, mitochondrial

Participant: 28S ribosomal protein S5, mitochondrial

Accession: EBI-11324806

Name: EBI-1054287

Stoichiometry: 0.0

F
Participant: 28S ribosomal protein S5, mitochondrial

Participant: 28S ribosomal protein S5, mitochondrial

Accession: EBI-11324806

Name: EBI-1054287

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 28S ribosomal protein S5, mitochondrial

Participant: 28S ribosomal protein S5, mitochondrial

Accession: EBI-11324806

Name: EBI-1054287

Confidences:

Type
Value
No records found.

11
EBI-1047080
 logo
CAPRIN1
GPIAP1
GPIP137

[+8]
Caprin-1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Caprin-1

Participant: Caprin-1

Accession: EBI-11324808

Name: EBI-1047080

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Caprin-1

Participant: Caprin-1

Accession: EBI-11324808

Name: EBI-1047080

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Caprin-1

Participant: Caprin-1

Accession: EBI-11324808

Name: EBI-1047080

Stoichiometry: 0.0

F
Participant: Caprin-1

Participant: Caprin-1

Accession: EBI-11324808

Name: EBI-1047080

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Caprin-1

Participant: Caprin-1

Accession: EBI-11324808

Name: EBI-1047080

Confidences:

Type
Value
No records found.

12
EBI-1105035
 logo
NEFM
NEF3
NFM

[+3]
Neurofilament medium polypeptide
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Neurofilament medium polypeptide

Participant: Neurofilament medium polypeptide

Accession: EBI-11324810

Name: EBI-1105035

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Neurofilament medium polypeptide

Participant: Neurofilament medium polypeptide

Accession: EBI-11324810

Name: EBI-1105035

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Neurofilament medium polypeptide

Participant: Neurofilament medium polypeptide

Accession: EBI-11324810

Name: EBI-1105035

Stoichiometry: 0.0

F
Participant: Neurofilament medium polypeptide

Participant: Neurofilament medium polypeptide

Accession: EBI-11324810

Name: EBI-1105035

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Neurofilament medium polypeptide

Participant: Neurofilament medium polypeptide

Accession: EBI-11324810

Name: EBI-1105035

Confidences:

Type
Value
No records found.

13
EBI-473291
 logo
Formin-binding protein 3
Formin-binding protein 11
Huntingtin-interacting protein A

[+11]
Pre-mRNA-processing factor 40 homolog A
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Pre-mRNA-processing factor 40 homolog A

Participant: Pre-mRNA-processing factor 40 homolog A

Accession: EBI-11324812

Name: EBI-473291

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Pre-mRNA-processing factor 40 homolog A

Participant: Pre-mRNA-processing factor 40 homolog A

Accession: EBI-11324812

Name: EBI-473291

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Pre-mRNA-processing factor 40 homolog A

Participant: Pre-mRNA-processing factor 40 homolog A

Accession: EBI-11324812

Name: EBI-473291

Stoichiometry: 0.0

F
Participant: Pre-mRNA-processing factor 40 homolog A

Participant: Pre-mRNA-processing factor 40 homolog A

Accession: EBI-11324812

Name: EBI-473291

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Pre-mRNA-processing factor 40 homolog A

Participant: Pre-mRNA-processing factor 40 homolog A

Accession: EBI-11324812

Name: EBI-473291

Confidences:

Type
Value
No records found.

14
EBI-538479
 logo
Splicing factor Prp8
PRP8 homolog
220 kDa U5 snRNP-specific protein

[+3]
Pre-mRNA-processing-splicing factor 8
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Pre-mRNA-processing-splicing factor 8

Participant: Pre-mRNA-processing-splicing factor 8

Accession: EBI-11324814

Name: EBI-538479

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Pre-mRNA-processing-splicing factor 8

Participant: Pre-mRNA-processing-splicing factor 8

Accession: EBI-11324814

Name: EBI-538479

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Pre-mRNA-processing-splicing factor 8

Participant: Pre-mRNA-processing-splicing factor 8

Accession: EBI-11324814

Name: EBI-538479

Stoichiometry: 0.0

F
Participant: Pre-mRNA-processing-splicing factor 8

Participant: Pre-mRNA-processing-splicing factor 8

Accession: EBI-11324814

Name: EBI-538479

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Pre-mRNA-processing-splicing factor 8

Participant: Pre-mRNA-processing-splicing factor 8

Accession: EBI-11324814

Name: EBI-538479

Confidences:

Type
Value
No records found.

15
EBI-721244
 logo
WARS1
IFI53
Interferon-induced protein 53

[+3]
Tryptophan--tRNA ligase, cytoplasmic
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Tryptophan--tRNA ligase, cytoplasmic

Participant: Tryptophan--tRNA ligase, cytoplasmic

Accession: EBI-11324816

Name: EBI-721244

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Tryptophan--tRNA ligase, cytoplasmic

Participant: Tryptophan--tRNA ligase, cytoplasmic

Accession: EBI-11324816

Name: EBI-721244

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Tryptophan--tRNA ligase, cytoplasmic

Participant: Tryptophan--tRNA ligase, cytoplasmic

Accession: EBI-11324816

Name: EBI-721244

Stoichiometry: 0.0

F
Participant: Tryptophan--tRNA ligase, cytoplasmic

Participant: Tryptophan--tRNA ligase, cytoplasmic

Accession: EBI-11324816

Name: EBI-721244

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Tryptophan--tRNA ligase, cytoplasmic

Participant: Tryptophan--tRNA ligase, cytoplasmic

Accession: EBI-11324816

Name: EBI-721244

Confidences:

Type
Value
No records found.

16
EBI-1051424
 logo
Ubiquinol-cytochrome-c reductase complex core protein 2
Core protein II
Complex III subunit 2

[+1]
Cytochrome b-c1 complex subunit 2, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Accession: EBI-11324818

Name: EBI-1051424

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Accession: EBI-11324818

Name: EBI-1051424

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Accession: EBI-11324818

Name: EBI-1051424

Stoichiometry: 0.0

F
Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Accession: EBI-11324818

Name: EBI-1051424

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Participant: Cytochrome b-c1 complex subunit 2, mitochondrial

Accession: EBI-11324818

Name: EBI-1051424

Confidences:

Type
Value
No records found.

17
EBI-1246309
 logo
NDUFS8
NADH-ubiquinone oxidoreductase 23 kDa subunit
Complex I-23kD

[+1]
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Accession: EBI-11324820

Name: EBI-1246309

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Accession: EBI-11324820

Name: EBI-1246309

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Accession: EBI-11324820

Name: EBI-1246309

Stoichiometry: 0.0

F
Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Accession: EBI-11324820

Name: EBI-1246309

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Participant: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

Accession: EBI-11324820

Name: EBI-1246309

Confidences:

Type
Value
No records found.

18
EBI-5325394
 logo
Mitochondrial large ribosomal subunit protein uL1m
BM-022
MRPL1
39S ribosomal protein L1, mitochondrial
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: 39S ribosomal protein L1, mitochondrial

Participant: 39S ribosomal protein L1, mitochondrial

Accession: EBI-11324822

Name: EBI-5325394

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: 39S ribosomal protein L1, mitochondrial

Participant: 39S ribosomal protein L1, mitochondrial

Accession: EBI-11324822

Name: EBI-5325394

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: 39S ribosomal protein L1, mitochondrial

Participant: 39S ribosomal protein L1, mitochondrial

Accession: EBI-11324822

Name: EBI-5325394

Stoichiometry: 0.0

F
Participant: 39S ribosomal protein L1, mitochondrial

Participant: 39S ribosomal protein L1, mitochondrial

Accession: EBI-11324822

Name: EBI-5325394

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: 39S ribosomal protein L1, mitochondrial

Participant: 39S ribosomal protein L1, mitochondrial

Accession: EBI-11324822

Name: EBI-5325394

Confidences:

Type
Value
No records found.

19
EBI-715531
 logo
RNA-binding motif protein 4B
RNA-binding protein 30
RNA-binding motif protein 30

[+2]
RNA-binding protein 4B
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: RNA-binding protein 4B

Participant: RNA-binding protein 4B

Accession: EBI-11324824

Name: EBI-715531

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: RNA-binding protein 4B

Participant: RNA-binding protein 4B

Accession: EBI-11324824

Name: EBI-715531

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: RNA-binding protein 4B

Participant: RNA-binding protein 4B

Accession: EBI-11324824

Name: EBI-715531

Stoichiometry: 0.0

F
Participant: RNA-binding protein 4B

Participant: RNA-binding protein 4B

Accession: EBI-11324824

Name: EBI-715531

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: RNA-binding protein 4B

Participant: RNA-binding protein 4B

Accession: EBI-11324824

Name: EBI-715531

Confidences:

Type
Value
No records found.

20
EBI-1054743
 logo
Spliceosome-associated protein 114
SF3a120
SF3A1

[+1]
Splicing factor 3A subunit 1
Homo sapiens
Organism Details

Accession: EBI-874

Name: human

Description: Homo sapiens

Cross References:

Database
Identifier
Secondary identifier
Qualifier
human

Expressed In Details

Accession:

Name:

-
prey
Experimental role: prey
Accession: EBI-58

Name: prey

Description: prey

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0498
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Molecule experimentally identified as being captured by a given bait.


unspecified role
Biological role: unspecified role
Accession: EBI-77781

Name: unspecified role

Description: unspecified role

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0499
-
identity
pubmed
14755292
-
primary-reference


Annotations:
Topic
Text
definition
Role not specified or not applicable to the data.


protein
Interactor type: protein
Accession: EBI-619654

Name: protein

Description: protein

Cross References:
Database
Identifier
Secondary identifier
Qualifier
psi-mi
MI:0326
-
identity
pubmed
14755292
-
primary-reference
so
SO:0000358
-
see-also


Annotations:
Topic
Text
definition
A linear polymer of amino acids joined by peptide bonds in a specific sequence.


A
Participant: Splicing factor 3A subunit 1

Participant: Splicing factor 3A subunit 1

Accession: EBI-11324826

Name: EBI-1054743

Cross References:

Database
Identifier
Secondary identifier
Qualifier
-

P
Participant: Splicing factor 3A subunit 1

Participant: Splicing factor 3A subunit 1

Accession: EBI-11324826

Name: EBI-1054743

Parameters:

Type
Value
Unit
Base
Exponent
Uncertainty
No records found.


S
Participant: Splicing factor 3A subunit 1

Participant: Splicing factor 3A subunit 1

Accession: EBI-11324826

Name: EBI-1054743

Stoichiometry: 0.0

F
Participant: Splicing factor 3A subunit 1

Participant: Splicing factor 3A subunit 1

Accession: EBI-11324826

Name: EBI-1054743

Features:

Legend:
A
Annotation and Cross Reference  
Feature Name
Feature Type
Detection Method
Range positions
More...
No records found.

C
Participant: Splicing factor 3A subunit 1

Participant: Splicing factor 3A subunit 1

Accession: EBI-11324826

Name: EBI-1054743

Confidences:

Type
Value
No records found.