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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF07720 - TPR_3)
FAM  PF07720
PID  TPR_3
DES  Tetratricopeptide repeat
IPR  IPR011716
ANO  18
ALN  39
AID  0.233186
APH  ((((((Q8PBF9_XANCP/177-212:2.59136,Q9JS94_CHLPN/349-380:0.47895):0.59419,Q7VEF1_PROMA/684-717:1.31603):0.00000,((((Q93FL5_9ENTR/32-65:0.35537,Q7NUW9_CHRVO/37-70:0.52890):0.46596,((IPGC_SHIFL/36-69:0.00000,YGEG_ECOLI/40-73:0.68356):0.02304,SPAT_SALTY/37-70:0.26746):0.54932):0.46182,(O84580_CHLTR/78-108:0.20252,Q9Z795_CHLPN/81-114:0.11883):0.17705):0.30790,Q9HEH5_NEUCR/31-64:1.06760):0.28265):0.41340,Y1348_METJA/16-52:0.91010):0.09880,(Q932S4_YEREN/77-110:0.03591,((YGEG_ECOLI/74-107:1.03946,SPAT_SALTY/71-104:0.01565):0.17070,IPGC_SHIFL/70-103:0.24388):0.35985):0.63905):0.85683,Q9PL56_CHLMU/88-121:0.10174,Q9Z6N8_CHLPN/88-121:0.13972);
ATP  ((((((Q8PBF9_XANCP/177-212,Q9JS94_CHLPN/349-380),Q7VEF1_PROMA/684-717),((((Q93FL5_9ENTR/32-65,Q7NUW9_CHRVO/37-70),((IPGC_SHIFL/36-69,YGEG_ECOLI/40-73),SPAT_SALTY/37-70)),(O84580_CHLTR/78-108,Q9Z795_CHLPN/81-114)),Q9HEH5_NEUCR/31-64)),Y1348_METJA/16-52),(Q932S4_YEREN/77-110,((YGEG_ECOLI/74-107,SPAT_SALTY/71-104),IPGC_SHIFL/70-103))),Q9PL56_CHLMU/88-121,Q9Z6N8_CHLPN/88-121);
ATL  15.002
DNO  18
DLN  117
DID  0.395562
DPH  ((((((((Q9JS94_CHLPN/349-380:0.51840,(((Q93FL5_9ENTR/32-65:0.39385,(Q8PBF9_XANCP/177-212:0.75268,Q7NUW9_CHRVO/37-70:0.12393):0.21068):0.31919,((IPGC_SHIFL/36-69:0.12418,SPAT_SALTY/37-70:0.22005):0.14934,YGEG_ECOLI/40-73:0.31770):0.18079):0.21562,(O84580_CHLTR/78-108:0.24086,Q9Z795_CHLPN/81-114:0.22687):0.22744):0.03324):0.20685,Q9HEH5_NEUCR/31-64:0.56401):0.05490,Q7VEF1_PROMA/684-717:0.53609):0.13066,Y1348_METJA/16-52:0.50533):0.24425,YGEG_ECOLI/74-107:0.22429):0.33073,Q932S4_YEREN/77-110:0.20629):0.03476,(IPGC_SHIFL/70-103:0.20691,SPAT_SALTY/71-104:0.22077):0.08055):0.73924,Q9PL56_CHLMU/88-121:0.05948,Q9Z6N8_CHLPN/88-121:0.20858);
DTP  ((((((((Q9JS94_CHLPN/349-380,(((Q93FL5_9ENTR/32-65,(Q8PBF9_XANCP/177-212,Q7NUW9_CHRVO/37-70)),((IPGC_SHIFL/36-69,SPAT_SALTY/37-70),YGEG_ECOLI/40-73)),(O84580_CHLTR/78-108,Q9Z795_CHLPN/81-114))),Q9HEH5_NEUCR/31-64),Q7VEF1_PROMA/684-717),Y1348_METJA/16-52),YGEG_ECOLI/74-107),Q932S4_YEREN/77-110),(IPGC_SHIFL/70-103,SPAT_SALTY/71-104)),Q9PL56_CHLMU/88-121,Q9Z6N8_CHLPN/88-121);
DTL  8.83179
RID  0.233186
RPH  ((((((Q8PBF9_XANCP/177-212:2.59136,Q9JS94_CHLPN/349-380:0.47895):0.59419,Q7VEF1_PROMA/684-717:1.31603):0.00000,((((Q93FL5_9ENTR/32-65:0.35537,Q7NUW9_CHRVO/37-70:0.52890):0.46596,((IPGC_SHIFL/36-69:0.00000,YGEG_ECOLI/40-73:0.68356):0.02304,SPAT_SALTY/37-70:0.26746):0.54932):0.46182,(O84580_CHLTR/78-108:0.20252,Q9Z795_CHLPN/81-114:0.11883):0.17705):0.30790,Q9HEH5_NEUCR/31-64:1.06760):0.28265):0.41340,Y1348_METJA/16-52:0.91010):0.09880,(Q932S4_YEREN/77-110:0.03591,((YGEG_ECOLI/74-107:1.03946,SPAT_SALTY/71-104:0.01565):0.17070,IPGC_SHIFL/70-103:0.24388):0.35985):0.63905):0.85683,Q9PL56_CHLMU/88-121:0.10174,Q9Z6N8_CHLPN/88-121:0.13972);
RTP  ((((((Q8PBF9_XANCP/177-212,Q9JS94_CHLPN/349-380),Q7VEF1_PROMA/684-717),((((Q93FL5_9ENTR/32-65,Q7NUW9_CHRVO/37-70),((IPGC_SHIFL/36-69,YGEG_ECOLI/40-73),SPAT_SALTY/37-70)),(O84580_CHLTR/78-108,Q9Z795_CHLPN/81-114)),Q9HEH5_NEUCR/31-64)),Y1348_METJA/16-52),(Q932S4_YEREN/77-110,((YGEG_ECOLI/74-107,SPAT_SALTY/71-104),IPGC_SHIFL/70-103))),Q9PL56_CHLMU/88-121,Q9Z6N8_CHLPN/88-121);
RTL  15.002
LNK  IPGC_SHIFL/36-69:P18008:M86530
LNK  IPGC_SHIFL/70-103:P18008:M86530
LNK  O84580_CHLTR/78-108:O84580:AE001328
LNK  Q7NUW9_CHRVO/37-70:Q7NUW9:AE016919
LNK  Q7VEF1_PROMA/684-717:Q7VEF1:AE017161
LNK  Q8PBF9_XANCP/177-212:Q8PBF9:AE012215
LNK  Q932S4_YEREN/77-110:Q932S4:AF005744
LNK  Q93FL5_9ENTR/32-65:Q93FL5:AF311901
LNK  Q9HEH5_NEUCR/31-64:Q9HEH5:AL451022
LNK  Q9JS94_CHLPN/349-380:Q9JS94:BA000008
LNK  Q9PL56_CHLMU/88-121:Q9PL56:AE002292
LNK  Q9Z6N8_CHLPN/88-121:Q9Z6N8:AE001682
LNK  Q9Z795_CHLPN/81-114:Q9Z795:AE001662
LNK  SPAT_SALTY/37-70:P40703:U25631
LNK  SPAT_SALTY/71-104:P40703:U25631
LNK  Y1348_METJA/16-52:Q58743:U67574
LNK  YGEG_ECOLI/40-73:Q46787:U28375
LNK  YGEG_ECOLI/74-107:Q46787:U28375
AMK  xxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q7VEF1_PROMA/684-717
ASQ  IDYLYSL--.ALAQALKKKATDAYQTLD--YLTNIDSEN
DSQ  ATTGATTATCTTTATTCTTTA------...GCATTAGCTCAGGCTTTGAAGAAGAAAGCTACTGATGCATATCAAACATTAGAT------TATTTAACTAATATTGATTCAGAAAAT
TRN  11011101111011000
NAM  Q9Z795_CHLPN/81-114
ASQ  LEEIYTV--.AYTFYSQGKYNEAVGLFQ--LLAAAQPQN
DSQ  TTAGAGGAGATCTATACTGTA------...GCTTATACATTCTATTCTCAAGGGAAGTACAACGAAGCTGTAGGACTCTTCCAG------TTATTGGCAGCAGCACAACCTCAGAAC
TRN  11011111111111110
NAM  O84580_CHLTR/78-108
ASQ  LEEIYTV--.AYTFYSQGKYQEAIGLFQ-----ILTASK
DSQ  CTTGAAGAAATCTACACCGTA------...GCATATACTTTCTACTCCCAAGGGAAATATCAGGAAGCTATCGGTCTTTTCCAA---------------ATCTTAACAGCCTCCAAA
TRN  11011101111011010
NAM  YGEG_ECOLI/40-73
ASQ  LDRIYAY--.AFDYHEKGNITDAEIY--YKFLCIYAFEN
DSQ  CTTGATAGAATATATGCATAT------...GCATTCGACTACCATGAAAAGGGTAATATAACGGACGCAGAAATTTAT------TATAAATTCTTGTGCATTTATGCGTTCGAAAAT
TRN  10010101110011011
NAM  SPAT_SALTY/37-70
ASQ  MDGLYAH--.AYEFYNQGRLDEAETF--FRFLCIYDFYN
DSQ  ATGGACGGTTTATATGCTCAT------...GCTTATGAGTTTTATAACCAGGGACGACTGGATGAAGCTGAGACGTTC------TTTCGTTTCTTATGCATTTATGATTTTTACAAT
TRN  11011111101111110
NAM  IPGC_SHIFL/36-69
ASQ  MDDIYSY--.AYDFYNKGRIEEAEVF--FRFLCIYDFYN
DSQ  ATGGATGACATTTATTCATAT------...GCTTATGACTTTTACAACAAAGGAAGAATAGAGGAAGCTGAAGTTTTC------TTCAGGTTTTTATGTATATACGACTTTTACAAT
TRN  10010101110011000
NAM  Q7NUW9_CHRVO/37-70
ASQ  LESLYGY--.AKQLFDGGEIAAARNVYQ--LLSTLDHWN
DSQ  CTGGAGTCGCTGTACGGCTAT------...GCCAAGCAGCTGTTCGATGGCGGCGAAATCGCTGCCGCCCGAAATGTCTACCAG------TTGCTGAGCACGCTGGACCACTGGAAT
TRN  11011111101111111
NAM  Q93FL5_9ENTR/32-65
ASQ  LNDLHSY--.AYTVYQSGDIITARNL--FHLLTYLEHWN
DSQ  CTCAATGATCTTCATTCTTAT------...GCCTATACAGTATATCAATCTGGTGATATTATAACCGCAAGAAATCTA------TTCCATTTGCTAACATATCTGGAGCACTGGAAT
TRN  10010101100011011
NAM  Q9JS94_CHLPN/349-380
ASQ  PEYGFFL--.GAYFYAKGKYESAEKV----FLQIIDPAV
DSQ  CCAGAATATGGGTTTTTTCTA------...GGTGCATATTTCTATGCTAAAGGGAAATACGAGAGCGCTGAGAAAGTT------------TTCTTACAGATTATAGATCCCGCTGTA
TRN  10010101110011010
NAM  Q9HEH5_NEUCR/31-64
ASQ  LADLSAH--.AAAQYAQKNYDEAAEL--YAQAAEMQAEM
DSQ  CTCGCCGATCTGTCCGCCCAC------...GCCGCCGCCCAGTACGCGCAAAAGAACTACGATGAGGCCGCTGAGCTG------TACGCACAAGCCGCCGAGATGCAGGCCGAGATG
TRN  11011111101111111
NAM  Y1348_METJA/16-52
ASQ  SNFLYKYWLkGCEFYNKKDYDKAIEYFS--LSNKIFKEN
DSQ  TCAAATTTTCTATACAAATATTGGCTTaaaGGATGTGAGTTTTATAATAAAAAGGACTACGATAAAGCAATAGAGTATTTTAGT------TTATCTAATAAAATCTTTAAAGAAAAT
TRN  10010101110011000
NAM  Q9Z6N8_CHLPN/88-121
ASQ  SKFWFSL--.GASLHMSEQYSQALHA--YGVTAVLRDKD
DSQ  TCTAAGTTTTGGTTTTCTTTA------...GGTGCCTCTCTACATATGTCCGAACAATATTCACAAGCTTTGCATGCC------TATGGAGTCACTGCAGTCCTTCGAGATAAAGAT
TRN  11011101111011000
NAM  Q9PL56_CHLMU/88-121
ASQ  SKFWFSL--.GASLHMLQKYQQALHAYS--VAAFLREKD
DSQ  TCTAAGTTTTGGTTTTCATTA------...GGAGCTTCTCTCCACATGCTCCAAAAATATCAACAAGCCCTTCATGCCTATAGT------GTAGCGGCATTCCTAAGGGAAAAAGAT
TRN  10010101110011000
NAM  Q932S4_YEREN/77-110
ASQ  TDYVMGL--.AAVYQLTKRYEKAVELYS--LAFVLAKDD
DSQ  ACTGATTATGTTATGGGGTTG------...GCAGCTGTTTATCAGCTAACCAAGCGTTATGAAAAAGCAGTGGAACTTTACTCT------TTGGCTTTTGTTCTGGCAAAAGATGAT
TRN  11011101101011011
NAM  SPAT_SALTY/71-104
ASQ  PDYTMGL--.AAVCQLKKQFQKACDL--YAVAFTLLKND
DSQ  CCCGATTACACCATGGGACTG------...GCGGCAGTATGCCAACTGAAAAAACAATTTCAGAAAGCATGTGACCTT------TATGCAGTAGCGTTTACGTTACTTAAAAATGAT
TRN  11011101101011010
NAM  IPGC_SHIFL/70-103
ASQ  VDYIMGL--.AAIYQIKEQFQQAADL--YAVAFALGKND
DSQ  GTAGACTACATTATGGGACTC------...GCAGCTATTTATCAGATAAAAGAACAGTTCCAACAAGCAGCAGACCTT------TATGCTGTCGCTTTTGCATTAGGAAAAAATGAC
TRN  10010101110011010
NAM  YGEG_ECOLI/74-107
ASQ  HEYLKDF--.ASVCQPKKKYQQAYDL--YKLSYNYFPYD
DSQ  CATGAGTATCTAAAAGATTTT------...GCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTT------TACAAACTAAGTTACAATTACTTCCCGTATGAT
TRN  11011101111011001
NAM  Q8PBF9_XANCP/177-212
ASQ  PEQIKAH--.AALVQQMDKLYGARHFDHYEFLLALTKKL
DSQ  CCCGAGCAGATCAAGGCGCAC------...GCCGCGTTGGTGCAGCAAATGGACAAGCTGTATGGCGCGCGGCATTTCGACCACTACGAATTTTTGCTGGCGCTGACCAAGAAGCTG
TRN  11011111101111111
//