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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF06175 - MiaE)
FAM  PF06175
PID  MiaE
DES  tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
IPR  IPR010386
ANO  6
ALN  250
AID  0.470201
APH  ((Q8CX43_SHEON/3-250:0.37601,(Q9KQT8_VIBCH/11-254:0.19428,MIAE_SALTY/21-264:0.34632):0.04579):0.27009,(Q8YT06_ANASP/3-199:0.25389,Q8DGE6_SYNEL/14-210:0.28379):0.60960,Q9I2V2_PSEAE/4-199:0.27939);
ATP  ((Q8CX43_SHEON/3-250,(Q9KQT8_VIBCH/11-254,MIAE_SALTY/21-264)),(Q8YT06_ANASP/3-199,Q8DGE6_SYNEL/14-210),Q9I2V2_PSEAE/4-199);
ATL  2.65916
DNO  6
DLN  750
DID  0.502647
DPH  ((Q9KQT8_VIBCH/11-254:0.23615,Q8CX43_SHEON/3-250:0.35473):0.06438,MIAE_SALTY/21-264:0.31064,((Q8DGE6_SYNEL/14-210:0.23167,Q8YT06_ANASP/3-199:0.33043):0.44233,Q9I2V2_PSEAE/4-199:0.29122):0.20557);
DTP  ((Q9KQT8_VIBCH/11-254,Q8CX43_SHEON/3-250),MIAE_SALTY/21-264,((Q8DGE6_SYNEL/14-210,Q8YT06_ANASP/3-199),Q9I2V2_PSEAE/4-199));
DTL  2.46712
RID  0.470201
RPH  ((Q8CX43_SHEON/3-250:0.37601,(Q9KQT8_VIBCH/11-254:0.19428,MIAE_SALTY/21-264:0.34632):0.04579):0.27009,(Q8YT06_ANASP/3-199:0.25389,Q8DGE6_SYNEL/14-210:0.28379):0.60960,Q9I2V2_PSEAE/4-199:0.27939);
RTP  ((Q8CX43_SHEON/3-250,(Q9KQT8_VIBCH/11-254,MIAE_SALTY/21-264)),(Q8YT06_ANASP/3-199,Q8DGE6_SYNEL/14-210),Q9I2V2_PSEAE/4-199);
RTL  2.65916
LNK  MIAE_SALTY/21-264:Q08015:X73368
LNK  Q8CX43_SHEON/3-250:Q8CX43:AE015623
LNK  Q8DGE6_SYNEL/14-210:Q8DGE6:BA000039
LNK  Q8YT06_ANASP/3-199:Q8YT06:BA000019
LNK  Q9I2V2_PSEAE/4-199:Q9I2V2:AE004605
LNK  Q9KQT8_VIBCH/11-254:Q9KQT8:AE004266
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9I2V2_PSEAE/4-199
ASQ  TMLPEIDQFLACSTPAAWVEAALERQ--DVMLLDHKACEMKAAATAMQLIGKYS---------------------------------------------------GRLDLVNKMSRLAREELRHFEQVLAILKKRGIRVVNVSASRYASALRDLVRKQEPQRLTDTLVVGAFIEARSCERFAALVPHL-DAELAKFYGGLLKSESRHFQDYLKLAYQYGDEADVERTIEVVRAKEAELISSPDNEFRFHS
DSQ  ACCATGTTGCCCGAGATCGACCAATTCCTTGCCTGTTCCACTCCCGCCGCCTGGGTCGAGGCGGCCCTGGAGCGCCAG------GACGTCATGCTGCTGGACCACAAGGCCTGCGAGATGAAGGCCGCGGCGACGGCGATGCAACTGATCGGCAAGTACTCC---------------------------------------------------------------------------------------------------------------------------------------------------------GGCCGCCTGGACCTGGTGAACAAGATGAGCCGCCTGGCGCGCGAGGAGCTGCGCCACTTCGAGCAGGTGCTGGCGATCCTGAAGAAACGCGGTATCCGGGTGGTCAATGTCAGCGCCTCCCGCTACGCCTCGGCGCTGCGCGACCTGGTGCGCAAGCAGGAGCCGCAGCGGCTGACCGATACGCTGGTGGTCGGCGCCTTCATCGAGGCGCGTTCCTGCGAGCGCTTCGCCGCCCTGGTGCCGCACCTG---GACGCGGAGCTGGCGAAATTCTACGGCGGTTTGCTGAAGTCCGAGTCGCGGCATTTCCAGGACTACCTGAAGCTGGCCTACCAGTACGGCGACGAGGCCGACGTGGAGCGGACGATCGAGGTGGTGCGGGCCAAGGAGGCCGAGCTGATCAGCAGTCCGGACAACGAATTCCGCTTCCACAGC
TRN  11011101101011011
NAM  Q8CX43_SHEON/3-250
ASQ  QLLAPVHAFLRCETPQTWIDVARASASLDELLIDHCNCELKAAQTAMFLLRRYALNAESGQSLLAWAKPYEEFVYHKDRDIEQFLARDVKKNELVAVLQPNQHFSFAQDLIPPLIRLIKEEFHHFEQVLELMHARQIPYRNIRAGRYAKGMMSHVTTHEKNILRDKLIVGAYIEARSCERFAKLAPYL-DAELSKFYVSLLRSEARHFEDYLKLAQLVSSE-DISERVAYFGEREAELIMAPDDEFHFHS
DSQ  CAATTATTGGCACCTGTTCATGCGTTTCTTCGCTGTGAGACGCCGCAAACTTGGATTGATGTAGCAAGAGCCTCAGCTTCGTTAGATGAACTCTTAATCGATCATTGTAATTGTGAGCTAAAAGCCGCGCAGACTGCGATGTTTTTGTTAAGGCGTTATGCCCTTAATGCTGAAAGTGGGCAATCGCTGTTGGCGTGGGCAAAACCCTACGAAGAATTTGTCTATCATAAGGATCGCGATATTGAGCAGTTTTTGGCCCGTGATGTCAAAAAGAATGAGCTGGTTGCCGTTCTACAACCTAATCAACATTTTTCCTTTGCTCAGGATCTTATTCCGCCACTTATTCGTCTAATAAAAGAAGAGTTCCATCATTTTGAACAAGTGCTTGAGTTGATGCACGCACGGCAAATTCCCTATCGCAATATTCGCGCAGGGCGTTATGCCAAGGGTATGATGAGCCATGTGACGACCCATGAGAAGAATATTCTGCGCGATAAGCTAATTGTCGGTGCTTATATTGAGGCGCGCTCCTGTGAGCGCTTTGCCAAATTAGCGCCTTATTTA---GATGCAGAATTAAGTAAGTTTTATGTGTCTTTGCTGCGCTCTGAGGCTCGTCATTTTGAGGATTATCTTAAGCTTGCACAATTGGTCTCAAGTGAG---GATATCAGCGAGCGCGTTGCTTATTTTGGCGAAAGGGAAGCCGAATTGATTATGGCGCCCGATGACGAATTTCATTTCCACAGT
TRN  10010101100011000
NAM  Q9KQT8_VIBCH/11-254
ASQ  QLLEPINHFLQCPTPDEWVEEARKPENLRVLLLDHLLCELKAGQSAMFLIRKYAVDKESELSLLDWFKPYEDFAYRKIGDIQSLKG----KSQISKAIIAKSDSPYSQDLIDKMVLLIKEELHHFYQVLEIMQARNVEYESIPASRYAKSLLAHMKTHEPQTLIDKLIVGAYIEARSCERFAKLAPYL-DDEIAKFYVSLLRSEARHYQDYLQLAEQIAGY-DISERVAYFGRVEAELISTPDSDFKFHS
DSQ  CAACTTTTAGAACCGATTAACCATTTCCTGCAATGTCCTACACCCGACGAATGGGTTGAAGAAGCGCGCAAACCTGAAAACCTACGTGTTTTGTTGTTAGACCATTTACTATGTGAGCTGAAAGCTGGTCAATCCGCCATGTTTCTGATCCGTAAGTATGCGGTTGATAAAGAGAGTGAACTTTCGCTATTGGATTGGTTTAAACCTTATGAAGACTTTGCGTATCGCAAAATTGGAGATATCCAATCGCTCAAAGGC------------AAAAGCCAAATCTCCAAAGCGATCATTGCCAAATCGGATTCTCCTTATAGCCAAGATTTGATCGATAAAATGGTATTGCTAATCAAGGAAGAGCTACACCATTTCTATCAAGTGTTGGAAATTATGCAAGCGCGCAATGTGGAGTATGAGTCAATTCCGGCTAGCCGTTATGCCAAAAGCCTTCTAGCCCATATGAAGACTCATGAACCACAGACATTGATTGATAAGCTGATAGTAGGCGCTTATATTGAGGCTCGCTCTTGTGAGCGCTTTGCCAAACTCGCCCCCTACTTA---GATGACGAGATAGCAAAATTTTATGTTTCTCTGCTTCGCTCTGAAGCTCGCCATTATCAAGACTACTTGCAACTGGCTGAACAAATTGCGGGCTAC---GATATCTCTGAACGTGTTGCGTATTTTGGCCGAGTCGAAGCGGAGTTAATTTCCACTCCCGATAGCGATTTCAAGTTTCACAGT
TRN  10010101100011000
NAM  MIAE_SALTY/21-264
ASQ  QILSPVLNFLHCPTPQAWIVQARDPQNLPLLLTDHLICELKAAQTALLLVRKYVADKSGADALLSWLQPYEAFAFRQGPEPD----FVALHKQISKSAMPQTDDPWGRQLIDRMVLLIKEELHHFWQVREVMQARNIPYVKITASRYAKGMLKAVRTHEPLTLIDKLICGAYIEARSCERFAALAPWL-DEDLQTFYLSLLRSEARHYQDYLALAQQISAE-DISARVRYFGEVEADLILSPDREFRFHS
DSQ  CAAATACTCTCTCCGGTGCTTAATTTCCTGCATTGCCCGACGCCGCAGGCGTGGATTGTCCAGGCCCGCGATCCGCAAAATCTTCCTCTTCTGCTTACCGATCACCTGATCTGCGAACTGAAGGCTGCGCAAACCGCGTTGCTGTTGGTGCGTAAATATGTCGCCGATAAATCGGGCGCCGACGCGCTGCTCTCCTGGCTGCAACCTTACGAGGCGTTCGCGTTTCGTCAGGGGCCGGAGCCGGAT------------TTTGTTGCCCTGCATAAACAGATTAGCAAAAGCGCCATGCCGCAAACTGATGACCCCTGGGGACGTCAGCTTATCGACCGTATGGTGTTATTGATTAAAGAGGAGTTGCACCATTTTTGGCAGGTACGCGAGGTCATGCAGGCCAGAAACATTCCTTATGTGAAAATCACCGCCAGCCGCTACGCGAAAGGAATGTTGAAAGCGGTACGCACGCACGAACCGCTCACCTTAATTGATAAGCTGATTTGCGGGGCGTATATCGAAGCCCGCTCCTGCGAACGTTTTGCCGCTCTGGCGCCCTGGCTG---GATGAGGATTTACAGACGTTTTATCTCTCGCTTCTGCGCTCCGAAGCACGGCATTATCAGGATTACCTGGCGCTGGCGCAGCAGATTTCCGCCGAG---GACATTTCTGCGCGCGTGCGCTATTTTGGCGAGGTAGAAGCTGACCTTATCTTGTCGCCAGACCGCGAGTTTCGTTTTCATAGC
TRN  10010101100011010
NAM  Q8YT06_ANASP/3-199
ASQ  TPVLPKINVLKQTTSEAWIEQA--IANLDIILLDHSHCERKAAGVALNFMFRY---------------------------------------------------PSNTKMVRELTAIAREELEHFELVNQWLERRNIPLAPLPPPPYGAGLKAAARTNEPERFLDSLLVTGLIEARSHERLGLLATHCPEPELAKFYKGLMASEARHFGTYWVLADTYFDREIVSQRLDELAIVESELLENLHPEPRIHS
DSQ  ACCCCCGTGTTACCAAAAATCAATGTACTAAAGCAAACTACGAGTGAGGCTTGGATAGAACAAGCG------ATCGCTAACTTAGATATCATATTGCTTGACCACTCCCACTGCGAACGCAAAGCGGCGGGTGTGGCTTTAAATTTTATGTTTCGCTAC---------------------------------------------------------------------------------------------------------------------------------------------------------CCATCCAATACCAAAATGGTAAGGGAATTAACGGCGATCGCCCGTGAAGAATTAGAACATTTTGAACTGGTAAATCAGTGGCTAGAACGCCGCAATATACCCCTAGCACCCCTACCCCCTCCTCCCTATGGCGCTGGCTTAAAAGCGGCTGCACGTACCAACGAACCCGAACGCTTTTTAGATTCCTTACTCGTGACTGGTTTAATCGAAGCACGAAGTCACGAACGCTTAGGCTTATTAGCTACACACTGTCCCGAACCAGAACTAGCCAAGTTTTATAAAGGTTTGATGGCCTCAGAGGCGCGACACTTTGGTACATATTGGGTTTTAGCGGATACTTACTTTGACCGGGAAATTGTTAGTCAAAGGCTCGATGAATTAGCTATTGTTGAAAGTGAGTTACTGGAAAATTTACACCCAGAACCTAGAATTCATAGT
TRN  10010101100011000
NAM  Q8DGE6_SYNEL/14-210
ASQ  IETPVRIKFLLQPTRREWVEQA--IAHLDTILLDHSHCERKAAGVAINLMFRY---------------------------------------------------PSHKPLVNALTDIAQEELDHFRQVNQQLERRHIALAPLSPPPYASRLNAAVRQQEPQRLLDRLLVCALIEARSHERLQLLAQHCPEGELAAFFASLVTSEARHYGTYWSLAYGSFGQEVVAERLQQLAALESEILSTPYPLPRMHS
DSQ  ATTGAGACTCCCGTTCGCATTAAGTTCCTCCTCCAACCTACCCGTCGTGAGTGGGTAGAGCAGGCG------ATCGCTCACCTAGATACGATTTTGCTCGATCACTCCCACTGTGAGCGCAAAGCTGCTGGGGTAGCGATCAATCTCATGTTTCGCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------CCTTCCCACAAACCATTGGTGAATGCCCTCACCGATATTGCCCAAGAGGAGCTCGACCACTTTCGCCAAGTCAATCAGCAATTAGAACGCCGCCACATTGCCCTTGCGCCCCTAAGTCCGCCCCCCTATGCCTCTCGCTTGAATGCAGCTGTCCGCCAACAGGAACCCCAGCGCCTCTTGGATCGCCTATTGGTCTGTGCCTTGATTGAAGCCCGCAGCCATGAGCGGTTGCAACTGTTGGCTCAGCACTGCCCAGAGGGCGAACTAGCGGCGTTCTTTGCGAGCCTAGTGACCTCTGAGGCACGCCACTATGGCACCTATTGGTCCTTGGCCTATGGCTCCTTTGGTCAAGAGGTAGTGGCAGAGCGATTACAGCAGTTAGCTGCTCTTGAAAGTGAAATTCTCAGCACCCCCTATCCCTTGCCGCGGATGCACAGT
TRN  11011101101011010
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