EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF06029 - AlkA_N)
FAM  PF06029
PID  AlkA_N
DES  AlkA N-terminal domain
IPR  IPR010316
ANO  11
ALN  148
AID  0.347933
APH  ((Q9ZBF2_STRCO/200-315:0.11947,ADA_MYCTU/201-316:0.29092):0.32157,(Q8PIS3_XANAC/197-314:0.41103,((Q9I339_PSEAE/9-126:0.77930,((Q8Z5G0_SALTI/1-112:0.13074,3MG2_ECOLI/1-112:0.30694):0.54549,Q8XWG9_RALSO/197-312:0.32054):0.19009):0.11328,((Q9KKT2_VIBCH/197-309:0.21445,Q8D4T1_VIBVU/201-319:0.46455):0.31098,Q8ECL0_SHEON/239-374:0.69984):0.37101):0.15232):0.45234,Q9ZBT8_STRCO/215-342:0.34981);
ATP  ((Q9ZBF2_STRCO/200-315,ADA_MYCTU/201-316),(Q8PIS3_XANAC/197-314,((Q9I339_PSEAE/9-126,((Q8Z5G0_SALTI/1-112,3MG2_ECOLI/1-112),Q8XWG9_RALSO/197-312)),((Q9KKT2_VIBCH/197-309,Q8D4T1_VIBVU/201-319),Q8ECL0_SHEON/239-374))),Q9ZBT8_STRCO/215-342);
ATL  6.54467
DNO  11
DLN  444
DID  0.460508
DPH  ((((((Q9I339_PSEAE/9-126:0.41553,((ADA_MYCTU/201-316:0.35020,Q9ZBF2_STRCO/200-315:0.11035):0.19332,Q9ZBT8_STRCO/215-342:0.16635):0.22199):0.09035,Q8PIS3_XANAC/197-314:0.33963):0.13900,Q8XWG9_RALSO/197-312:0.21761):0.12239,(3MG2_ECOLI/1-112:0.30745,Q8Z5G0_SALTI/1-112:0.08999):0.33833):0.25779,Q8ECL0_SHEON/239-374:0.42434):0.34274,Q8D4T1_VIBVU/201-319:0.36137,Q9KKT2_VIBCH/197-309:0.22412);
DTP  ((((((Q9I339_PSEAE/9-126,((ADA_MYCTU/201-316,Q9ZBF2_STRCO/200-315),Q9ZBT8_STRCO/215-342)),Q8PIS3_XANAC/197-314),Q8XWG9_RALSO/197-312),(3MG2_ECOLI/1-112,Q8Z5G0_SALTI/1-112)),Q8ECL0_SHEON/239-374),Q8D4T1_VIBVU/201-319,Q9KKT2_VIBCH/197-309);
DTL  4.71285
RID  0.347933
RPH  ((Q9ZBF2_STRCO/200-315:0.11947,ADA_MYCTU/201-316:0.29092):0.32157,(Q8PIS3_XANAC/197-314:0.41103,((Q9I339_PSEAE/9-126:0.77930,((Q8Z5G0_SALTI/1-112:0.13074,3MG2_ECOLI/1-112:0.30694):0.54549,Q8XWG9_RALSO/197-312:0.32054):0.19009):0.11328,((Q9KKT2_VIBCH/197-309:0.21445,Q8D4T1_VIBVU/201-319:0.46455):0.31098,Q8ECL0_SHEON/239-374:0.69984):0.37101):0.15232):0.45234,Q9ZBT8_STRCO/215-342:0.34981);
RTP  ((Q9ZBF2_STRCO/200-315,ADA_MYCTU/201-316),(Q8PIS3_XANAC/197-314,((Q9I339_PSEAE/9-126,((Q8Z5G0_SALTI/1-112,3MG2_ECOLI/1-112),Q8XWG9_RALSO/197-312)),((Q9KKT2_VIBCH/197-309,Q8D4T1_VIBVU/201-319),Q8ECL0_SHEON/239-374))),Q9ZBT8_STRCO/215-342);
RTL  6.54467
LNK  3MG2_ECOLI/1-112:P04395:K02498
LNK  ADA_MYCTU/201-316:Q10630:BX842576
LNK  Q8D4T1_VIBVU/201-319:Q8D4T1:AE016812
LNK  Q8ECL0_SHEON/239-374:Q8ECL0:AE015749
LNK  Q8PIS3_XANAC/197-314:Q8PIS3:AE011923
LNK  Q8XWG9_RALSO/197-312:Q8XWG9:AL646070
LNK  Q8Z5G0_SALTI/1-112:Q8Z5G0:AL627273
LNK  Q9I339_PSEAE/9-126:Q9I339:AE004596
LNK  Q9KKT2_VIBCH/197-309:Q9KKT2:AE004427
LNK  Q9ZBF2_STRCO/200-315:Q9ZBF2:AL939127
LNK  Q9ZBT8_STRCO/215-342:Q9ZBT8:AL939126
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9ZBT8_STRCO/215-342
ASQ  PLRL--AHRGPYQAGPVFDLLQREAVTGV-----------EEVSGETGRRLYRRTL----RLPYGTGIVAVQERPGRAGtgsggWLEARLHL---TDLRDLTTSVQRLRRLFDLDADPYAVDERLGADPRLAPLVAARPGLRSPGTAD
DSQ  CCGCTGCGCCTG------GCCCACCGCGGCCCCTACCAGGCCGGCCCCGTCTTCGACCTGCTCCAGCGGGAGGCCGTCACCGGCGTC---------------------------------GAGGAGGTGAGCGGCGAGACCGGCCGCCGCCTCTACCGGCGCACCCTG------------CGCCTGCCGTACGGCACCGGGATCGTCGCCGTCCAGGAACGGCCGGGCCGGGCGGGCaccggcagcgggggcTGGCTGGAGGCCCGCCTCCACCTC---------ACCGACCTGCGCGACCTGACCACCTCCGTACAGCGGCTGCGGCGGCTGTTCGACCTCGACGCCGACCCGTACGCCGTCGACGAGCGGCTCGGCGCCGACCCCCGGCTCGCCCCCCTGGTCGCCGCCCGCCCCGGGCTGCGCTCACCGGGCACCGCCGAC
TRN  11011111101111101
NAM  Q9ZBF2_STRCO/200-315
ASQ  SLRL--PFRAPLNPDNLFGHLAATAVPGV-----------EEWRDGA----YRRTL----RLPYGHGIVALTPNPDH--.....-IACRLTL---SDLRDLTVAISRCRRLLDLDADPTAIDDQLRADPLLAPLVDKAPGRRVPRTVD
DSQ  TCCCTCCGCCTC------CCCTTCCGCGCCCCCCTCAACCCCGACAACCTCTTCGGCCACCTCGCCGCCACCGCCGTACCCGGCGTG---------------------------------GAGGAGTGGCGGGACGGCGCG------------TACCGACGCACCCTG------------CGCCTCCCGTACGGTCACGGCATCGTGGCCCTCACCCCCAACCCCGACCAC------...............---ATCGCCTGCCGCCTCACCCTC---------AGCGACCTGCGCGACCTGACCGTCGCCATCAGCCGCTGCCGGCGCCTGCTCGACCTGGACGCCGACCCGACGGCGATCGACGACCAGCTGCGCGCCGACCCGCTGCTCGCGCCGCTCGTCGACAAGGCCCCCGGGCGGCGCGTGCCGCGCACCGTGGAC
TRN  11011111101111111
NAM  ADA_MYCTU/201-316
ASQ  SLRL--PVRAPFAFEGVFGHLAATAVPGC-----------EEVRDGA----YRRTL----RLPWGNGIVSLTPAPDH--.....-VRCLLVL---DDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVD
DSQ  TCGCTGCGGCTA------CCCGTCCGTGCACCATTCGCCTTCGAGGGTGTTTTCGGCCATCTGGCCGCCACCGCGGTGCCGGGTTGC---------------------------------GAAGAGGTCCGCGATGGTGCG------------TACCGACGCACGCTA------------CGGCTCCCATGGGGCAACGGCATCGTCAGCCTGACGCCGGCACCCGATCAT------...............---GTGCGCTGCCTGCTTGTGCTC---------GATGATTTCCGCGACCTGATGACGGCCACTGCACGTTGCCGACGGCTGCTGGACCTCGACGCCGATCCCGAAGCGATCGTCGAGGCGCTGGGCGCCGATCCGGATCTGCGCGCAGTGGTGGGCAAGGCACCCGGGCAACGCATTCCCCGCACAGTCGAC
TRN  11011111101111111
NAM  Q9I339_PSEAE/9-126
ASQ  VLHL--PYQSPWEWRQFHQHFALRLLAGV-----------ESLGDDH----YARSF----RANGRPAWFEVRPLAERQV.....-LALSLSP---SAHALAAELEARVRRMFDLDSDPAAIARHFAGDPLLGPLVAANPGLRLPVAFD
DSQ  GTCCTGCACCTG------CCCTACCAGTCACCCTGGGAATGGCGCCAGTTCCACCAGCATTTCGCCCTGCGCCTGCTCGCCGGTGTC---------------------------------GAAAGCCTGGGTGACGACCAC------------TATGCCCGCAGCTTC------------CGGGCCAACGGTCGCCCGGCCTGGTTCGAGGTGCGACCGCTGGCGGAACGCCAGGTC...............---CTGGCGCTGAGCCTCAGCCCG---------TCCGCCCATGCCCTGGCCGCCGAACTCGAGGCACGGGTCCGCCGGATGTTCGACCTGGACAGCGACCCGGCCGCCATCGCCCGGCATTTCGCCGGGGATCCCCTGCTCGGCCCGCTGGTGGCCGCCAATCCGGGACTGCGCCTGCCGGTGGCCTTCGAT
TRN  11011111101111101
NAM  Q8Z5G0_SALTI/1-112
ASQ  MFTL--SWQPPYDWSWMLGFLAARAVDGV-----------ETVGEGF----YARSL----VVGEHRGLVSVRPHLPTHT.....-VQVSVSA---GLLPVAPACLAKVSRLFDLDCQPEQVAAVLGP------LGEDRPGLRLPGSVD
DSQ  ATGTTTACCCTG------AGCTGGCAGCCGCCTTACGACTGGTCGTGGATGTTGGGCTTTCTTGCCGCGCGTGCGGTGGACGGCGTG---------------------------------GAAACAGTAGGCGAGGGCTTT------------TATGCGCGCAGCCTG------------GTGGTGGGCGAGCATCGCGGACTGGTCAGCGTGAGGCCCCATCTGCCCACCCACACT...............---GTGCAGGTTAGCGTGAGCGCC---------GGATTACTTCCCGTCGCGCCGGCGTGTCTGGCGAAAGTTTCGCGTCTGTTTGATCTTGACTGCCAGCCCGAGCAGGTTGCCGCCGTGCTGGGGCCA------------------CTGGGCGAGGACAGACCGGGGCTGCGTTTACCGGGATCGGTTGAT
TRN  10010101100011010
NAM  3MG2_ECOLI/1-112
ASQ  MYTL--NWQPPYDWSWMLGFLAARAVSSV-----------ETVADSY----YARSL----AVGEYRGVVTAIPDIARHT.....-LHINLSA---GLEPVAAECLAKMSRLFDLQCNPQIVNGALGR------LGAARPGLRLPGCVD
DSQ  ATGTATACCCTG------AACTGGCAGCCGCCGTATGACTGGTCGTGGATGTTGGGATTTCTCGCCGCCCGTGCGGTGAGCAGTGTG---------------------------------GAAACGGTCGCGGACAGTTAT------------TATGCCCGTAGTCTG------------GCGGTGGGCGAATATCGCGGCGTGGTGACTGCTATTCCGGATATAGCCCGCCATACT...............---CTGCACATAAATTTAAGTGCA---------GGTTTAGAACCTGTTGCCGCAGAGTGTCTGGCGAAAATGAGCCGCCTGTTTGATCTGCAATGTAACCCACAAATTGTTAACGGTGCGTTGGGCAGG------------------TTAGGCGCGGCGCGGCCCGGATTGCGTTTACCCGGCTGTGTTGAT
TRN  10010101100011010
NAM  Q8XWG9_RALSO/197-312
ASQ  TLML--GYRPPFAWHALLDFLRARAVDGV-----------EVVDAHS----YARTIALDYAGRRHAGWLRARDVPQRHA.....-IALTLSA---SLVQAMPPVLARVRRLFDLDCRPDLVDTHLGT------LAAGTPGLRVPGAVD
DSQ  ACGCTGATGCTG------GGTTACCGCCCGCCCTTCGCCTGGCACGCGCTGCTCGACTTCCTGCGCGCGCGTGCCGTGGACGGCGTC---------------------------------GAGGTGGTCGACGCGCACAGC------------TACGCCCGCACCATCGCGCTCGACTATGCCGGGCGCCGTCATGCCGGCTGGCTGCGCGCGCGCGACGTGCCGCAACGGCATGCG...............---ATCGCACTCACGCTGTCGGCC---------AGCCTGGTGCAGGCGATGCCGCCGGTCCTGGCCCGCGTGCGCCGCCTGTTCGATCTCGATTGCCGGCCCGACCTGGTCGACACGCACCTCGGCACG------------------CTTGCCGCCGGCACGCCCGGCCTGCGCGTGCCGGGGGCGGTGGAC
TRN  11011111101111111
NAM  Q8PIS3_XANAC/197-314
ASQ  TLRL--GYRPPLDLPAMLAFLQRRAIPGI-----------EQVDANG----YRRVI----GAPGNASVIEVSAAPQRAE.....-LLLRIGA---TDPRQIPQIVRRVRRLFDLDADLQAVHATLAPEPLLAEAIARRPGLRVPGGWD
DSQ  ACATTGCGCCTG------GGCTATCGCCCGCCGCTGGACCTGCCGGCGATGCTGGCCTTCTTGCAGCGCCGCGCGATCCCGGGCATC---------------------------------GAGCAGGTCGATGCGAACGGC------------TACCGGCGCGTGATC------------GGCGCGCCGGGCAACGCCAGCGTGATCGAGGTCAGCGCGGCACCGCAGCGCGCGGAG...............---CTGCTGCTGCGCATCGGCGCC---------ACCGACCCGCGCCAGATTCCGCAGATCGTGCGACGCGTGCGCCGGCTGTTCGATCTGGATGCAGACCTGCAGGCCGTGCACGCCACGCTCGCGCCGGAACCGCTGCTGGCCGAGGCAATCGCGCGCCGACCCGGCCTACGCGTGCCCGGTGGCTGGGAC
TRN  11011111101111111
NAM  Q9KKT2_VIBCH/197-309
ASQ  HLSL--AFRGPFDWAHMLDFYRLRAIEGM-----------ELIDEQS----YQRHFVLGEGTGWFKASMAQSH------.....-LDIEFEM---ERLSDLRHLVARLRRMFDLDADLISIEAHLEQ---LAPGLVRRTGIRIPGVWN
DSQ  CATCTGAGCTTA------GCTTTTCGCGGCCCTTTTGACTGGGCGCATATGTTGGATTTTTATCGTCTGCGAGCGATTGAAGGCATG---------------------------------GAGCTGATCGATGAACAGAGC------------TATCAACGTCATTTTGTCCTTGGTGAAGGTACAGGATGGTTTAAGGCGAGCATGGCACAGTCGCAC------------------...............---TTAGACATTGAGTTTGAGATG---------GAGCGTTTGAGTGATCTTCGCCACTTAGTCGCTCGGCTGCGACGAATGTTTGATCTCGATGCAGACCTGATCAGTATTGAGGCTCATTTAGAGCAG---------TTAGCTCCGGGATTGGTACGGCGCACCGGGATCCGTATCCCCGGGGTATGGAAT
TRN  11011111101111110
NAM  Q8D4T1_VIBVU/201-319
ASQ  HIVL--AFRGDLNVKHMLDFYRQRAIEGV-----------EVVTETS----YQRQVVINGKTVGFRAEFPATFPAEKRQ.....-LVVYFSM---DDLTLLRPMVAGIRRMFDLDCDTRVIEAHLNT---VAPGLVKSVGIRIPGVWS
DSQ  CATATTGTGCTC------GCGTTTCGCGGTGATTTGAACGTAAAACACATGCTGGATTTTTATCGGCAGCGAGCGATTGAAGGCGTA---------------------------------GAGGTGGTGACGGAGACGAGT------------TATCAACGTCAAGTCGTGATCAACGGAAAAACGGTTGGGTTTCGCGCGGAATTTCCCGCAACATTTCCAGCAGAGAAGCGGCAG...............---TTAGTGGTTTATTTTTCGATG---------GATGATCTGACGTTGTTGCGCCCGATGGTGGCTGGAATCAGGCGGATGTTCGATCTCGATTGCGACACGCGCGTGATTGAAGCCCATCTCAACACT---------GTAGCGCCTGGGTTGGTCAAAAGCGTTGGTATCCGGATTCCGGGTGTCTGGAGT
TRN  10010101100011010
NAM  Q8ECL0_SHEON/239-374
ASQ  SLSLYQYYRPPLDWQAQLAFYRLRAVAGMEWFSNTDNDCLEKIAQDKQALEYGRTL----QIDDIRAVVHIIHEAHLHR.....-FKLTLTFTPDSPIAGLQKLITQVRRILDLDADMQQIEHNLQRLTDLK--LIPKSGLRIPGAGS
DSQ  AGTTTAAGTTTGTATCAGTATTATCGTCCGCCGCTCGATTGGCAGGCGCAGCTGGCCTTTTATCGCCTGCGCGCTGTTGCTGGAATGGAATGGTTTAGCAATACAGATAATGACTGCCTCGAAAAGATAGCACAGGATAAACAAGCGCTTGAGTATGGCCGCACCCTG------------CAGATCGACGATATACGTGCGGTGGTGCATATCATCCATGAGGCGCATTTACATCGC...............---TTTAAACTCACGCTGACATTCACGCCAGACTCGCCCATAGCGGGCCTACAAAAACTCATTACCCAAGTGCGGCGCATTTTAGATCTCGATGCCGATATGCAGCAGATTGAGCATAACTTACAGCGTTTGACCGATCTTAAG------CTAATCCCTAAATCAGGGCTTAGGATCCCTGGCGCCGGCTCT
TRN  10010101100011000
//