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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF04989 - CmcI)
FAM  PF04989
PID  CmcI
DES  Cephalosporin hydroxylase
IPR  IPR007072
ANO  4
ALN  264
AID  0.384964
APH  (Q9CD89_MYCLE/1-229:0.07153,Q50457_MYCTU/1-245:0.21663,(P72897_SYNY3/1-249:0.99206,Q98ID5_RHILO/1-217:0.97245):0.48928);
ATP  (Q9CD89_MYCLE/1-229,Q50457_MYCTU/1-245,(P72897_SYNY3/1-249,Q98ID5_RHILO/1-217));
ATL  2.74195
DNO  4
DLN  792
DID  0.47608
DPH  (Q9CD89_MYCLE/1-229:0.14646,Q50457_MYCTU/1-245:0.12589,(P72897_SYNY3/1-249:0.72156,Q98ID5_RHILO/1-217:0.62631):0.33406);
DTP  (Q9CD89_MYCLE/1-229,Q50457_MYCTU/1-245,(P72897_SYNY3/1-249,Q98ID5_RHILO/1-217));
DTL  1.95428
RID  0.384964
RPH  (Q9CD89_MYCLE/1-229:0.07153,Q50457_MYCTU/1-245:0.21663,(P72897_SYNY3/1-249:0.99206,Q98ID5_RHILO/1-217:0.97245):0.48928);
RTP  (Q9CD89_MYCLE/1-229,Q50457_MYCTU/1-245,(P72897_SYNY3/1-249,Q98ID5_RHILO/1-217));
RTL  2.74195
LNK  P72897_SYNY3/1-249:P72897:BA000022
LNK  Q50457_MYCTU/1-245:Q50457:U00024
LNK  Q98ID5_RHILO/1-217:Q98ID5:BA000012
LNK  Q9CD89_MYCLE/1-229:Q9CD89:AL583917
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9CD89_MYCLE/1-229
ASQ  M---------------ER-VRQMFSCVSGMIYRPTDSIAEEYHKWYYGNFVWNTTTWMGIKCLKSVSDMWNYQEILIELEPSLVIEFGSRFGGSALFFANV-----MMHIGQPFKVLSVDISHKDLDPAARQ-P----DILFIESPSTAPAIAEQIRRLKNEYPGKIFAILDSDHSMKQVLAEMKLLQPLLTAGDYLVVEDS---NLNGHPVLPR---FGAGPYEAIEAYEREFPGDYEHDVAREKKFGFTFA--TNGFLIR-K
DSQ  ATG---------------------------------------------GAACGA---GTACGACAAATGTTCAGTTGTGTGTCCGGAATGATTTACCGGCCTACCGATTCTATAGCCGAAGAATATCACAAATGGTATTACGGCAACTTTGTGTGGAATACTACTACTTGGATGGGGATTAAATGCTTGAAGTCGGTCAGCGATATGTGGAACTACCAGGAAATCCTGATCGAGTTGGAACCCTCCCTGGTCATAGAGTTCGGTAGCCGCTTCGGTGGCTCTGCGCTTTTTTTTGCCAACGTC---------------ATGATGCACATCGGCCAACCGTTCAAGGTGCTCTCGGTGGATATTTCTCACAAGGATCTCGACCCAGCAGCGCGCCAA---CCA------------GATATTTTGTTCATCGAATCACCATCTACCGCGCCGGCGATCGCCGAGCAAATTCGACGCCTTAAAAATGAATACCCCGGTAAGATCTTCGCCATCTTGGACAGTGATCACTCGATGAAACAAGTACTGGCCGAGATGAAACTACTACAACCTTTACTCACCGCTGGTGACTATCTGGTCGTGGAAGATTCT---------AATCTCAATGGCCATCCCGTTCTTCCGCGG---------TTTGGCGCCGGCCCGTATGAAGCCATTGAGGCATACGAGCGTGAATTTCCGGGTGATTACGAGCACGATGTCGCACGGGAGAAAAAATTCGGATTTACATTCGCG------ACCAACGGATTCTTGATCCGC---AAA
TRN  10010101100011000
NAM  Q50457_MYCTU/1-245
ASQ  MGLVWRSRTSLVGQLIGL-VRLVASFAAQLFYRPSDAVAEEYHKWYYGNLVWTKTTYMGINCWKSVSDMWNYQEILSELQPSLVIEFGTRYGGSAVYFANI-----MRQIGQPFKVLTVDNSHKALDPRARREP----DVLFVESSSTDPAIAEQIQRLKNEYPGKIFAILDSDHSMNHVLAEMKLLRPLLSAGDYLVVEDS---NINGHPVLPG---FGPGPYEAIEAYEDEFPNDYKHDAERENKFGWTSA--PNGFLIR-N
DSQ  ATGGGGCTAGTGTGGCGCAGTCGGACTAGTCTTGTAGGGCAACTGATCGGACTA---GTCAGGTTAGTGGCGAGTTTTGCGGCCCAGTTATTCTACCGGCCGAGCGACGCAGTGGCGGAAGAATACCACAAGTGGTACTACGGCAACTTAGTGTGGACGAAGACCACTTATATGGGGATCAATTGCTGGAAATCCGTCAGCGATATGTGGAATTACCAGGAGATCCTGAGCGAGTTGCAACCATCCCTCGTCATCGAGTTCGGCACCCGCTACGGCGGCTCGGCGGTGTATTTTGCCAACATC---------------ATGAGGCAGATCGGCCAGCCATTCAAGGTACTTACCGTGGACAACTCACACAAAGCCCTCGATCCAAGAGCCCGGCGCGAACCA------------GATGTTTTGTTCGTTGAATCGTCATCCACCGACCCGGCGATTGCCGAACAAATTCAACGCCTCAAAAACGAATACCCTGGCAAGATCTTCGCCATCTTAGATAGCGACCACTCGATGAATCATGTGCTGGCCGAGATGAAATTACTACGGCCGCTACTCTCCGCCGGTGACTACCTAGTAGTCGAGGATTCC---------AACATCAACGGCCACCCAGTCCTGCCCGGG---------TTTGGGCCTGGACCCTATGAAGCGATCGAGGCATATGAGGATGAATTTCCAAACGATTACAAGCATGATGCGGAGCGGGAGAACAAATTCGGCTGGACTTCCGCG------CCCAACGGATTTCTGATCCGC---AAC
TRN  10010101100011000
NAM  Q98ID5_RHILO/1-217
ASQ  M--------------IER-LATGSALLGAALARIQDGTM--------------RYTYKGVPTYKNPFDLALYQMLLWQQKPRTLIEIGSKWGGSALWFADM-----MCSFGVDCVIHSIDIT-----PPSISVP----GVTFHRGDGRDLAATLPAD-LMESLPRPIFVIEDADHHCETTLAVLRFFDRWLVAGEYIAVEDGIVDDLYGPEFVAR---LMGGPRRAVELFLRDRGQNYEIDTGLCDHFGTNVTWNVNGYLRRVR
DSQ  ATG------------------------------------------ATTGAACGT---CTTGCCACCGGAAGTGCATTGCTTGGCGCAGCGCTTGCGAGGATTCAAGACGGCACGATG------------------------------------------CGCTACACGTACAAGGGCGTGCCCACCTACAAAAATCCATTCGATCTGGCGCTGTACCAAATGCTGCTTTGGCAGCAAAAGCCCCGGACATTGATCGAGATCGGCTCCAAATGGGGCGGCAGCGCGCTCTGGTTTGCCGATATG---------------ATGTGCAGCTTCGGCGTCGACTGCGTCATTCACTCGATCGACATCACG---------------CCGCCCTCGATCAGCGTACCG------------GGCGTGACGTTTCATCGTGGCGACGGTCGCGACCTGGCGGCAACCCTACCGGCGGAT---CTGATGGAGAGCCTCCCCAGGCCGATTTTCGTCATCGAGGACGCGGACCATCATTGCGAGACGACGCTCGCCGTGCTGCGCTTCTTCGATCGTTGGCTGGTTGCCGGAGAGTATATTGCCGTCGAGGACGGTATTGTAGACGATCTTTATGGTCCAGAATTTGTCGCCAGG---------CTGATGGGCGGCCCGCGTCGTGCGGTCGAGCTGTTCTTGCGCGATCGTGGGCAGAACTATGAAATCGATACCGGCCTTTGCGACCACTTCGGCACCAATGTGACGTGGAACGTCAACGGCTATCTCCGTCGCGTTCGC
TRN  10010101100011011
NAM  P72897_SYNY3/1-249
ASQ  MNPLDSFKSQVEANVTGLGADKDIQALSRIWSRETNRNGYTY-----------NYSWLGRPIIQYPQDIMAMQELIWSIQPDLIIETGIAHGGSLIFSASMLELNAISGGPQDAEVLGIDIDIRQHNREAIEAHPMVKRISMIQGSSIAPEIIEQVK-AKAEGKQKILVCLDSNHTHDHVLAELEAYAPLTSVGSYCVVFDTVVEDLPDEMFGDRPWGVGNNPKTAVWEYLKTHP-EFEIDKSIQHKLLITVA--PDGYLKRLG
DSQ  GTGAATCCATTAGACTCTTTTAAATCTCAAGTTGAAGCAAATGTTACGGGACTTGGAGCGGACAAAGATATTCAGGCGCTATCTCGAATATGGTCGCGTGAAACTAATCGAAATGGTTACACTTAT---------------------------------AACTATTCATGGCTAGGCCGCCCCATTATTCAATATCCCCAAGACATTATGGCCATGCAAGAGTTGATCTGGTCAATTCAGCCAGATTTAATCATCGAAACGGGCATTGCCCACGGTGGATCGCTGATTTTTTCGGCTTCCATGTTAGAACTCAATGCTATTTCTGGTGGTCCCCAGGATGCAGAAGTGTTGGGTATAGACATTGACATTCGTCAACATAATCGGGAAGCCATTGAAGCCCATCCCATGGTTAAGCGCATCTCCATGATCCAGGGTTCTAGCATTGCTCCAGAAATAATTGAACAAGTTAAA---GCTAAAGCCGAAGGCAAACAAAAAATTCTCGTTTGTCTGGATAGTAATCACACCCATGATCATGTGCTGGCAGAATTGGAAGCCTATGCTCCCCTAACCTCCGTGGGTAGTTACTGCGTCGTATTCGATACAGTAGTCGAAGATCTGCCTGACGAGATGTTTGGCGACAGGCCCTGGGGCGTGGGGAATAATCCCAAGACAGCGGTGTGGGAATATCTCAAAACCCATCCT---GAATTTGAAATTGACAAGAGCATCCAGCACAAATTGTTGATTACTGTGGCT------CCCGATGGCTATTTGAAGCGGTTAGGT
TRN  10010101100011000
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