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Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF03529 - TF_Otx)
FAM  PF03529
PID  TF_Otx
DES  Otx1 transcription factor
IPR  IPR003025
ANO  7
ALN  102
AID  0.600777
APH  ((Q98SI7_XENLA/188-274:0.22292,(OTX1L_BRARE/180-276:0.37564,((OTX2_XENLA/153-235:0.00710,OTX2_HUMAN/153-235:0.02945):0.11120,Q9PVM0_XENLA/152-237:0.30271):0.37591):0.08842):0.05088,OTX1_BRARE/173-261:0.20934,OTX1_HUMAN/187-280:0.12412);
ATP  ((Q98SI7_XENLA/188-274,(OTX1L_BRARE/180-276,((OTX2_XENLA/153-235,OTX2_HUMAN/153-235),Q9PVM0_XENLA/152-237))),OTX1_BRARE/173-261,OTX1_HUMAN/187-280);
ATL  1.89769
DNO  7
DLN  306
DID  0.627771
DPH  (((OTX2_XENLA/153-235:0.12235,OTX2_HUMAN/153-235:0.08296):0.15454,Q9PVM0_XENLA/152-237:0.22785):0.27454,(OTX1_BRARE/173-261:0.15371,(OTX1_HUMAN/187-280:0.18423,Q98SI7_XENLA/188-274:0.16933):0.08988):0.06286,OTX1L_BRARE/180-276:0.25766);
DTP  (((OTX2_XENLA/153-235,OTX2_HUMAN/153-235),Q9PVM0_XENLA/152-237),(OTX1_BRARE/173-261,(OTX1_HUMAN/187-280,Q98SI7_XENLA/188-274)),OTX1L_BRARE/180-276);
DTL  1.77991
RID  0.600777
RPH  ((Q98SI7_XENLA/188-274:0.22292,(OTX1L_BRARE/180-276:0.37564,((OTX2_XENLA/153-235:0.00710,OTX2_HUMAN/153-235:0.02945):0.11120,Q9PVM0_XENLA/152-237:0.30271):0.37591):0.08842):0.05088,OTX1_BRARE/173-261:0.20934,OTX1_HUMAN/187-280:0.12412);
RTP  ((Q98SI7_XENLA/188-274,(OTX1L_BRARE/180-276,((OTX2_XENLA/153-235,OTX2_HUMAN/153-235),Q9PVM0_XENLA/152-237))),OTX1_BRARE/173-261,OTX1_HUMAN/187-280);
RTL  1.89769
LNK  OTX1_BRARE/173-261:Q91994:D26172
LNK  OTX1_HUMAN/187-280:P32242:BC007621
LNK  OTX1L_BRARE/180-276:Q90267:D26174
LNK  OTX2_HUMAN/153-235:P32243:AF298117
LNK  OTX2_XENLA/153-235:Q91813:Z46972
LNK  Q98SI7_XENLA/188-274:Q98SI7:AY029294
LNK  Q9PVM0_XENLA/152-237:Q9PVM0:AB034702
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9PVM0_XENLA/152-237
ASQ  SPASISPIPDPLSI-ATTPCMQRS---.------AGYPMTYSQAPAYTQSY-GGSS-SYFTGLDCGSYLSPM--HPQLSAPGSTLSPIASST-MGSHLSQSP
DSQ  AGTCCAGCATCCATATCCCCCATTCCTGATCCTCTCTCTATT---GCAACTACTCCCTGCATGCAGAGGTCA---------...------------------GCTGGCTACCCAATGACCTATAGTCAGGCCCCTGCTTATACTCAGAGCTAT---GGAGGATCCTCA---TCTTATTTCACAGGGCTGGACTGTGGATCCTATCTGTCTCCTATG------CACCCACAGCTCTCAGCTCCTGGTTCCACCCTGAGCCCAATTGCCTCATCTACG---ATGGGTAGTCACCTCAGCCAATCTCCG
TRN  10010101100011001
NAM  OTX2_HUMAN/153-235
ASQ  SPASISPLSDPLST-S-SSCMQRS---.--------YPMTYTQASGYSQGY-AGST-SYFGGMDCGSYLTPM--HHQLPGPGATLSPMGTNA-VTSHLNQSP
DSQ  AGCCCAGCTTCCATCTCCCCACTGTCAGATCCCTTGTCCACC---TCC---TCTTCCTGCATGCAGAGGTCC---------...------------------------TATCCCATGACCTATACTCAGGCTTCAGGTTATAGTCAAGGATAT---GCTGGCTCAACT---TCCTACTTTGGGGGCATGGACTGTGGATCATATTTGACCCCTATG------CATCACCAGCTTCCCGGACCAGGGGCCACACTCAGTCCCATGGGTACCAATGCA---GTCACCAGCCATCTCAATCAGTCCCCA
TRN  10010101100011001
NAM  OTX2_XENLA/153-235
ASQ  SPASVSPLSDPLST-S-SSCMQRS---.--------YPMTYTQASGYSQGY-AGST-SYFGGMDCGSYLSPM--HHQLSGPGATLSPMGTNA-VTSHLNQSP
DSQ  AGCCCGGCCTCCGTCTCTCCTCTGTCCGACCCCCTGTCCACA---TCA---TCTTCATGTATGCAGAGGTCC---------...------------------------TACCCTATGACCTACACGCAGGCATCAGGGTACAGCCAAGGATAT---GCAGGCTCAACA---TCCTACTTTGGGGGTATGGACTGTGGATCTTACTTGAGCCCTATG------CATCATCAACTCTCTGGACCTGGAGCTACTCTAAGCCCAATGGGCACCAATGCA---GTGACAAGTCACCTTAACCAGTCCCCA
TRN  10010101100011001
NAM  Q98SI7_XENLA/188-274
ASQ  APGS---GPDPLG-TGSASCMQRS---.-GSSSAASYPMSYSQAAGYTQAYPAPSS-SYFSGVDCSSYLGPM--HSHHHP-H-QLSPMAPSS-MSGHHHHHH
DSQ  GCCCCTGGCTCT---------GGCCCCGACCCCCTGGGA---ACAGGCAGCGCCTCGTGCATGCAGCGCTCT---------...---GGCTCGTCTTCTGCCGCCTCCTATCCCATGTCCTACAGTCAGGCCGCCGGCTACACCCAGGCCTACCCCGCCCCCTCCTCC---TCCTACTTCAGCGGGGTCGATTGCAGCTCCTACCTGGGCCCCATG------CATTCCCACCATCACCCT---CAT---CAGCTCAGCCCTATGGCCCCTTCCTCT---ATGTCTGGCCACCACCACCATCATCAT
TRN  11011111101111111
NAM  OTX1_HUMAN/187-280
ASQ  APASVS-VPEPLAAPSNTSCMQRSVAA.GAATAAASYPMSYGQGGSYGQGYPTPSS-SYFGGVDCSSYLAPM--HSHHHP-H-QLSPMAPSS-MAGHHHHHP
DSQ  GCGCCCGCGTCCGTGTCG---GTGCCGGAGCCATTGGCCGCGCCTAGCAACACCTCGTGTATGCAGCGCTCCGTAGCTGCA...GGCGCCGCCACCGCAGCAGCCTCTTATCCCATGTCCTACGGCCAGGGCGGCAGCTACGGCCAAGGCTACCCTACGCCCTCCTCT---TCCTACTTTGGCGGCGTGGACTGCAGCTCATACCTAGCGCCCATG------CACTCACATCACCACCCG---CAC---CAGCTGAGCCCCATGGCACCCTCCTCC---ATGGCGGGCCACCATCATCACCACCCA
TRN  11011111101111101
NAM  OTX1_BRARE/173-261
ASQ  APPSVS-LPEPVA-PSNTSCMQRSVSG.---TASSTYPMPYNQTTGYSQGYPTPSG-SYFSGVDCGSYLAPM--HSHHHP-H-QLSPMTASS-MPTHPHHH-
DSQ  GCACCCCCATCTGTGTCC---CTGCCGGAGCCTGTCGCT---CCCTCAAACACCTCCTGCATGCAGCGTTCCGTCTCAGGC...---------ACAGCCAGCTCCACCTACCCCATGCCCTACAACCAGACCACCGGCTACAGCCAGGGCTACCCGACTCCGTCCGGT---TCTTACTTCAGTGGGGTGGACTGTGGGTCCTATCTGGCCCCCATG------CACTCTCACCACCACCCT---CAT---CAGCTCAGCCCCATGACGGCCTCATCC---ATGCCCACACACCCCCATCACCAC---
TRN  11011111101111101
NAM  OTX1L_BRARE/180-276
ASQ  APPS---LPDISP-PASASCMQRAMSSgGGTTGVPSYPMPYNQAPSYAQGYPTSNAASYFGGMDCGSYLAPMTGHAHHHP-HAHHSQLSTAAAVSGHHHPHH
DSQ  GCACCCCCCTCC---------CTCCCTGATATCTCGCCT---CCAGCCAGCGCATCCTGCATGCAGAGGGCTATGTCTAGTggaGGGGGGACCACTGGCGTCCCGTCGTACCCCATGCCCTACAATCAGGCTCCCAGCTACGCCCAGGGCTACCCGACCTCAAACGCTGCTTCTTATTTCGGAGGCATGGACTGCGGATCCTACTTGGCACCCATGACCGGCCACGCCCACCATCACCCG---CATGCCCATCACTCACAGCTGAGCACCGCCGCTGCAGTCTCAGGACACCATCATCCTCACCAT
TRN  10010101100011001
//