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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF02895 - H-kinase_dim)
FAM  PF02895
PID  H-kinase_dim
DES  Signal transducing histidine kinase, homodimeric domain
IPR  IPR004105
ANO  17
ALN  69
AID  0.343146
APH  (((((((((((CHEA_LISMO/240-300:0.66000,CHEA_BACSU/292-352:0.22045):0.29008,O58222_PYRHO/383-443:0.47069):0.11631,(O29222_ARCFU/274-333:0.51393,(O33554_RHOSH/265-325:0.57169,O85783_MYXXA/474-537:0.95992):0.22921):0.05372):0.08840,(P72250_RHOCE/222-282:0.63385,(O87124_PSEAE/367-427:0.55018,Q9ZIQ6_HELPY/262-330:0.25129):0.26451):0.17479):0.03050,CHEA_THEMA/293-353:0.41165):0.17627,Q48297_HALSA/295-353:0.75470):0.04995,Q55443_SYNY3/762-817:1.11214):0.03677,O51515_BORBU/332-390:0.80968):0.18488,CHEA_ECOLI/261-324:0.44591):0.40234,O85126_9RHIZ/357-420:0.05141):0.10104,CHEA_RHOSH/293-354:0.37547,O87714_CAUCR/359-422:0.33828);
ATP  (((((((((((CHEA_LISMO/240-300,CHEA_BACSU/292-352),O58222_PYRHO/383-443),(O29222_ARCFU/274-333,(O33554_RHOSH/265-325,O85783_MYXXA/474-537))),(P72250_RHOCE/222-282,(O87124_PSEAE/367-427,Q9ZIQ6_HELPY/262-330))),CHEA_THEMA/293-353),Q48297_HALSA/295-353),Q55443_SYNY3/762-817),O51515_BORBU/332-390),CHEA_ECOLI/261-324),O85126_9RHIZ/357-420),CHEA_RHOSH/293-354,O87714_CAUCR/359-422);
ATL  11.2975
DNO  17
DLN  207
DID  0.457058
DPH  ((((((((P72250_RHOCE/222-282:0.37646,((CHEA_ECOLI/261-324:0.51673,((CHEA_RHOSH/293-354:0.30930,O85126_9RHIZ/357-420:0.10816):0.05749,O87714_CAUCR/359-422:0.15158):0.12395):0.15049,Q48297_HALSA/295-353:0.31889):0.06286):0.06895,Q55443_SYNY3/762-817:0.68228):0.00000,((O33554_RHOSH/265-325:0.41028,O85783_MYXXA/474-537:0.44895):0.10857,(O87124_PSEAE/367-427:0.23110,Q9ZIQ6_HELPY/262-330:0.53682):0.10218):0.13857):0.15975,CHEA_THEMA/293-353:0.33277):0.18665,O29222_ARCFU/274-333:0.26222):0.16226,O51515_BORBU/332-390:0.57520):0.02003,O58222_PYRHO/383-443:0.32434):0.18859,CHEA_LISMO/240-300:0.39774,CHEA_BACSU/292-352:0.22590);
DTP  ((((((((P72250_RHOCE/222-282,((CHEA_ECOLI/261-324,((CHEA_RHOSH/293-354,O85126_9RHIZ/357-420),O87714_CAUCR/359-422)),Q48297_HALSA/295-353)),Q55443_SYNY3/762-817),((O33554_RHOSH/265-325,O85783_MYXXA/474-537),(O87124_PSEAE/367-427,Q9ZIQ6_HELPY/262-330))),CHEA_THEMA/293-353),O29222_ARCFU/274-333),O51515_BORBU/332-390),O58222_PYRHO/383-443),CHEA_LISMO/240-300,CHEA_BACSU/292-352);
DTL  7.73185
RID  0.343146
RPH  (((((((((((CHEA_LISMO/240-300:0.66000,CHEA_BACSU/292-352:0.22045):0.29008,O58222_PYRHO/383-443:0.47069):0.11631,(O29222_ARCFU/274-333:0.51393,(O33554_RHOSH/265-325:0.57169,O85783_MYXXA/474-537:0.95992):0.22921):0.05372):0.08840,(P72250_RHOCE/222-282:0.63385,(O87124_PSEAE/367-427:0.55018,Q9ZIQ6_HELPY/262-330:0.25129):0.26451):0.17479):0.03050,CHEA_THEMA/293-353:0.41165):0.17627,Q48297_HALSA/295-353:0.75470):0.04995,Q55443_SYNY3/762-817:1.11214):0.03677,O51515_BORBU/332-390:0.80968):0.18488,CHEA_ECOLI/261-324:0.44591):0.40234,O85126_9RHIZ/357-420:0.05141):0.10104,CHEA_RHOSH/293-354:0.37547,O87714_CAUCR/359-422:0.33828);
RTP  (((((((((((CHEA_LISMO/240-300,CHEA_BACSU/292-352),O58222_PYRHO/383-443),(O29222_ARCFU/274-333,(O33554_RHOSH/265-325,O85783_MYXXA/474-537))),(P72250_RHOCE/222-282,(O87124_PSEAE/367-427,Q9ZIQ6_HELPY/262-330))),CHEA_THEMA/293-353),Q48297_HALSA/295-353),Q55443_SYNY3/762-817),O51515_BORBU/332-390),CHEA_ECOLI/261-324),O85126_9RHIZ/357-420),CHEA_RHOSH/293-354,O87714_CAUCR/359-422);
RTL  11.2975
LNK  CHEA_BACSU/292-352:P29072:M57894
LNK  CHEA_ECOLI/261-324:P07363:M34669
LNK  CHEA_LISMO/240-300:Q48768:X76170
LNK  CHEA_RHOSH/293-354:Q53135:X80027
LNK  CHEA_THEMA/293-353:Q56310:AE001741
LNK  O29222_ARCFU/274-333:O29222:AE001031
LNK  O33554_RHOSH/265-325:O33554:AJ000977
LNK  O51515_BORBU/332-390:O51515:AE001158
LNK  O58222_PYRHO/383-443:O58222:BA000001
LNK  O85126_9RHIZ/357-420:O85126:AF044495
LNK  O85783_MYXXA/474-537:O85783:AF076485
LNK  O87124_PSEAE/367-427:O87124:AB012767
LNK  O87714_CAUCR/359-422:O87714:AJ006687
LNK  P72250_RHOCE/222-282:P72250:U64519
LNK  Q48297_HALSA/295-353:Q48297:X82645
LNK  Q55443_SYNY3/762-817:Q55443:BA000022
LNK  Q9ZIQ6_HELPY/262-330:Q9ZIQ6:AF021091
AMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.....xxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q9ZIQ6_HELPY/262-330
ASQ  EQTVRVDVRRLDHLMNLIGELVLGKNRLIRIYSDVEERYDgekflEELNQVVSSISAVTTDLQLAVMKT
DSQ  GAGCAAACCGTTAGGGTGGATGTGCGCCGCTTGGATCACTTGATGAATTTAATCGGTGAGCTTGTGTTAGGAAAAAATCGCTTGATTAGAATCTATAGCGATGTGGAAGAGCGCTATGATggggaaaagtttttaGAGGAATTAAACCAGGTAGTCTCTTCTATTTCAGCGGTAACGACAGACTTGCAGCTTGCGGTGATGAAAACC
TRN  10010101110011000
NAM  O87124_PSEAE/367-427
ASQ  ETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGD---.....EAMAKAVANLDVVTGDLQMSVMKT
DSQ  GAGACCACCGTGCGGGTGGATACGGCGCGTCTCGACGAGATCATGAACATGGTCGGCGAGCTGGTGCTGGTGCGTAACCGCCTGGTGCGCCTGGGCCTGAACAGTGGCGAC---------...............GAGGCCATGGCCAAGGCCGTGGCCAACCTCGACGTGGTCACCGGCGACCTGCAGATGTCGGTGATGAAGACC
TRN  11011111101111111
NAM  Q48297_HALSA/295-353
ASQ  -QSVRVDVDQLDELHGLVEQLVTTRIKLRRGMEESDR---.....-EVLDELDELDKITSSLQDTVMDM
DSQ  ---CAGTCGGTTCGCGTGGACGTCGATCAGCTCGACGAGCTCCACGGGCTGGTCGAGCAGTTGGTCACCACCCGCATCAAGCTCCGGCGGGGCATGGAGGAGAGCGACCGC---------...............---GAGGTGCTCGACGAGCTGGACGAGCTGGACAAGATCACCTCCAGCCTCCAGGACACCGTGATGGACATG
TRN  11011111101111111
NAM  P72250_RHOCE/222-282
ASQ  QQSIRVHVDLLENLMTMVSELVLTRNQLLQILRSQKE---.....SEFAAPLQRLNHVTSELQEGVMKT
DSQ  CAGCAGTCGATCCGCGTCCATGTGGATCTGCTGGAAAACCTGATGACCATGGTTTCGGAGCTGGTGCTGACCCGCAACCAGCTTCTCCAGATCCTGCGCTCCCAGAAGGAG---------...............AGCGAGTTCGCCGCGCCGCTGCAGCGCCTCAACCACGTCACCTCCGAACTTCAGGAGGGCGTGATGAAGACG
TRN  11011111101111111
NAM  O58222_PYRHO/383-443
ASQ  SRVIKIDVGHLDKLMNLVGELVITKGRLEQIGERLGD---.....RELFEALSTLSRLLTELQDEIMEM
DSQ  TCTAGGGTAATCAAGATCGACGTTGGACACTTGGATAAGCTAATGAACCTAGTTGGAGAGCTCGTCATAACGAAGGGTAGGCTTGAGCAGATAGGGGAGAGACTTGGAGAC---------...............AGGGAATTATTTGAGGCCCTTTCAACGTTATCAAGGCTTCTCACGGAGTTACAAGATGAGATAATGGAAATG
TRN  10010101110011000
NAM  O29222_ARCFU/274-333
ASQ  -ESIRVNISQLDTIMNLVGELVISKGRLLQIASEYDI---.....PELKEAVAIMDKSITSLQDEIMQI
DSQ  ---GAAAGCATAAGGGTGAACATATCGCAGCTTGACACGATAATGAACCTCGTCGGGGAGCTTGTGATAAGCAAGGGAAGGCTATTGCAGATTGCAAGCGAGTACGACATT---------...............CCTGAGCTGAAGGAAGCCGTTGCAATTATGGATAAGTCCATAACGAGCCTTCAGGACGAGATAATGCAGATA
TRN  10010101100011011
NAM  CHEA_BACSU/292-352
ASQ  SKTIRVNIDRLDSLMNLFEELVIDRGRLEQIAKELEH---.....NELTETVERMTRISGDLQSIILNM
DSQ  TCTAAAACAATTCGTGTCAACATTGACAGGCTTGATTCTTTAATGAACTTATTTGAAGAGCTTGTCATTGACCGCGGGCGTCTCGAGCAGATTGCGAAAGAGCTTGAGCAT---------...............AATGAACTGACTGAAACGGTTGAACGAATGACGAGAATTTCCGGAGATTTGCAATCGATTATTCTGAATATG
TRN  10010101100011010
NAM  CHEA_THEMA/293-353
ASQ  SQTVRVDIEKLDNLMDLMGELVIARSRILETLKKYNI---.....KELDESLSHLSRITLDLQNVVMKI
DSQ  TCGCAAACAGTCAGGGTAGATATAGAGAAACTGGACAATTTGATGGATTTGATGGGAGAACTGGTCATCGCAAGGAGCAGAATACTGGAAACGCTCAAGAAATACAACATA---------...............AAAGAACTGGATGAGAGTTTGTCTCATCTCAGCAGGATCACCTTAGACCTTCAGAATGTTGTGATGAAGATC
TRN  10010101100011010
NAM  CHEA_LISMO/240-300
ASQ  NKTIRVQLEKIEKLMNVFEESVIERARIDEIAEKTNN---.....KELMEHLGRFSSISKEIQNGLLNM
DSQ  AATAAAACCATTCGTGTACAACTTGAAAAAATCGAAAAGCTAATGAACGTTTTTGAAGAAAGCGTCATTGAACGGGCGAGAATTGATGAAATCGCAGAAAAAACGAATAAC---------...............AAAGAATTGATGGAACACTTAGGACGATTCAGTTCCATCTCCAAAGAAATTCAAAACGGCTTACTAAATATG
TRN  10010101110011010
NAM  O87714_CAUCR/359-422
ASQ  QSVIRVDPERIDRLIDLVGELVINQAMLAQGVGEYGIAPS.....SNLAMGLDELEHVTREIQDSVMAI
DSQ  CAGTCGGTCATCCGCGTCGATCCCGAGCGCATCGACCGCCTGATCGACCTCGTCGGCGAGCTGGTCATCAACCAGGCCATGCTGGCGCAGGGCGTCGGCGAGTATGGCATCGCCCCATCC...............TCCAACTTGGCCATGGGCCTCGACGAGCTGGAACACGTGACGCGCGAGATCCAGGACAGCGTCATGGCCATC
TRN  11011111101111111
NAM  O85126_9RHIZ/357-420
ASQ  GQTIRVDLDRVDRLINLVGELVINQAMLSQSVIENDASGT.....SAVNMGLDELQQLTREIQDSVMAI
DSQ  GGCCAGACCATCCGCGTCGACCTCGATCGCGTCGACCGCCTGATCAATCTCGTCGGCGAGCTTGTCATCAATCAGGCGATGCTGTCGCAGAGCGTCATCGAAAACGATGCGAGCGGCACC...............TCCGCCGTTAATATGGGTCTGGACGAGCTGCAGCAGCTGACGCGCGAAATCCAGGACAGCGTCATGGCCATC
TRN  11011111101111111
NAM  CHEA_RHOSH/293-354
ASQ  --TVRVELDRVDRLINIVGELVINQAMLSQCVQDEGVPPR.....SPVRNRLDDFRNLAREIQESVMAI
DSQ  ------ACCGTAAGAGTGGAACTCGATCGCGTCGATCGCCTGATCAACATTGTGGGCGAGCTGGTGATCAATCAGGCCATGCTCTCTCAGTGCGTTCAGGACGAGGGCGTGCCGCCGCGC...............TCGCCCGTTCGCAATCGGCTCGACGATTTCCGCAATCTCGCGCGGGAAATCCAGGAAAGCGTGATGGCCATC
TRN  10010101100011011
NAM  CHEA_ECOLI/261-324
ASQ  STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH.....GDLITSMGQLQRNARDLQESVMSI
DSQ  TCCACCAGCATCCGTGTAGCGGTAGAAAAGGTTGATCAATTAATTAACCTCGTCGGCGAGCTGGTTATCACCCAGTCCATGCTTGCCCAGCGTTCCAGCGAACTGGACCCGGTTAATCAT...............GGTGATTTGATAACCAGCATGGGGCAGTTACAACGTAACGCCCGTGATTTGCAGGAATCAGTGATGTCGATT
TRN  10010111100111000
NAM  O51515_BORBU/332-390
ASQ  --SIKVDSKKLDHLVNLVGELVTIQSKLSK---EAENRNS.....NILNSISAEFSLLINELRDYTTGL
DSQ  ------AGTATTAAGGTGGATTCTAAAAAGCTTGATCATTTGGTAAATCTTGTTGGAGAACTTGTTACAATACAATCAAAACTTTCAAAA---------GAAGCTGAAAATAGGAATAGT...............AATATTTTAAATTCAATATCAGCAGAATTTTCTTTGCTTATTAATGAGCTTAGGGATTATACAACAGGGCTT
TRN  10010101110011000
NAM  O85783_MYXXA/474-537
ASQ  SRTVRVRTELLDYFLDTVGELMLATARLREVGKVLPENTR.....PALEEGVYRLHTLVKDLHDKVMTA
DSQ  TCGCGCACGGTGCGCGTGCGCACGGAGCTCCTCGACTACTTCCTCGACACCGTGGGTGAGCTGATGCTTGCCACGGCCCGCCTGCGCGAGGTGGGCAAGGTGCTGCCGGAGAACACGCGC...............CCCGCGCTGGAAGAGGGCGTCTACCGGCTGCACACGTTGGTGAAGGACCTACACGACAAGGTGATGACGGCG
TRN  11011111101111111
NAM  O33554_RHOSH/265-325
ASQ  GATMRVAAERLDHLMDRVGELVIADARLLQLAQQSRD---.....PALMAAAEEISRLAAGLRDTTMRI
DSQ  GGCGCGACCATGAGGGTCGCAGCCGAGCGTCTCGATCACCTGATGGATCGGGTGGGCGAGCTCGTGATTGCCGACGCGCGTCTCCTCCAGCTCGCCCAGCAGAGCCGGGAT---------...............CCGGCCTTGATGGCCGCCGCCGAGGAAATCAGCCGCCTCGCGGCCGGTCTGCGCGACACGACCATGCGGATC
TRN  10010101100011011
NAM  Q55443_SYNY3/762-817
ASQ  NLSIRVDFQRLERMNNWVGELAINRNSLSL----QNQ---.....-QLQTAVGALGQRFGTFQTMALKL
DSQ  AATCTTTCCATCCGGGTGGATTTTCAACGGTTGGAGCGGATGAATAATTGGGTGGGGGAATTGGCCATTAATCGCAATAGCCTGTCTTTA------------CAAAATCAG---------...............---CAATTGCAAACGGCTGTGGGAGCCCTGGGGCAACGTTTTGGCACCTTCCAGACCATGGCGCTGAAACTG
TRN  11011101101011010
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