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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF02095 - Extensin_1)
FAM  PF02095
PID  Extensin_1
DES  Extensin-like protein repeat
IPR  IPR003883
ANO  28
ALN  10
AID  0.73068
APH  ((((Q43414_CICAR/40-49:0.00000,Q40376_MEDTR/452-461:0.20989):0.00000,Q43414_CICAR/170-179:0.10006):0.11064,(((((Q43414_CICAR/190-199:0.32052,Q43414_CICAR/160-169:0.12274):0.00000,PRP_MEDSA/42-51:0.00000):0.00000,((Q40376_MEDTR/77-86:0.18599,Q40376_MEDTR/27-36:0.08016):0.06092,Q40376_MEDTR/502-511:0.00000):0.11817):0.00000,(PRP_MEDSA/67-76:0.13633,PRP1_SOYBN/231-240:0.12761):0.00000):0.00000,(((Q40376_MEDTR/292-301:0.12805,Q40376_MEDTR/217-226:0.00000):0.11040,(((Q40376_MEDTR/472-481:0.10381,Q40376_MEDTR/392-401:0.00000):0.00000,(Q40376_MEDTR/532-541:0.11381,Q40376_MEDTR/57-66:0.33380):0.00000):0.00000,(Q40376_MEDTR/267-276:0.00000,(Q40376_MEDTR/167-176:0.09563,Q40376_MEDTR/442-451:0.00000):0.10083):0.11153):0.00000):0.11577,((Q40376_MEDTR/512-521:0.10769,Q40376_MEDTR/257-266:0.00000):0.11985,(Q40376_MEDTR/207-216:0.10935,Q40376_MEDTR/87-96:0.23021):0.00000):0.01592):0.00000):0.00000):0.11064,((PRP1_SOYBN/71-80:0.12351,PRP1_SOYBN/91-100:0.00000):0.12351,PRP1_SOYBN/201-210:0.00000):0.12303,Q43414_CICAR/60-69:0.00000);
ATP  ((((Q43414_CICAR/40-49,Q40376_MEDTR/452-461),Q43414_CICAR/170-179),(((((Q43414_CICAR/190-199,Q43414_CICAR/160-169),PRP_MEDSA/42-51),((Q40376_MEDTR/77-86,Q40376_MEDTR/27-36),Q40376_MEDTR/502-511)),(PRP_MEDSA/67-76,PRP1_SOYBN/231-240)),(((Q40376_MEDTR/292-301,Q40376_MEDTR/217-226),(((Q40376_MEDTR/472-481,Q40376_MEDTR/392-401),(Q40376_MEDTR/532-541,Q40376_MEDTR/57-66)),(Q40376_MEDTR/267-276,(Q40376_MEDTR/167-176,Q40376_MEDTR/442-451)))),((Q40376_MEDTR/512-521,Q40376_MEDTR/257-266),(Q40376_MEDTR/207-216,Q40376_MEDTR/87-96))))),((PRP1_SOYBN/71-80,PRP1_SOYBN/91-100),PRP1_SOYBN/201-210),Q43414_CICAR/60-69);
ATL  3.85037
DNO  28
DLN  30
DID  0.721958
DPH  (((((((((((((((Q40376_MEDTR/57-66:0.34998,Q40376_MEDTR/472-481:0.03442):0.00000,Q40376_MEDTR/392-401:0.00000):0.00000,Q40376_MEDTR/512-521:0.06978):0.07050,(PRP_MEDSA/42-51:0.03349,(PRP1_SOYBN/91-100:0.14252,PRP1_SOYBN/231-240:0.08646):0.02962):0.03665):0.01877,(Q40376_MEDTR/27-36:0.18680,Q40376_MEDTR/502-511:0.00000):0.02895):0.01803,(Q40376_MEDTR/257-266:0.01712,Q40376_MEDTR/207-216:0.06617):0.01774):0.00000,Q43414_CICAR/170-179:0.14148):0.07081,(PRP1_SOYBN/71-80:0.15041,PRP1_SOYBN/201-210:0.03233):0.07528):0.00000,((((Q40376_MEDTR/77-86:0.19207,PRP_MEDSA/67-76:0.09001):0.10780,Q43414_CICAR/160-169:0.05170):0.04512,Q40376_MEDTR/87-96:0.17304):0.07122,(Q43414_CICAR/40-49:0.07064,Q43414_CICAR/60-69:0.08949):0.00000):0.08711):0.03225,Q40376_MEDTR/452-461:0.15482):0.04760,Q40376_MEDTR/292-301:0.06899):0.04956,(Q43414_CICAR/190-199:0.16964,Q40376_MEDTR/532-541:0.04840):0.03730):0.12672,Q40376_MEDTR/217-226:0.07045):0.04337,Q40376_MEDTR/267-276:0.00000):0.01807,Q40376_MEDTR/167-176:0.01807,Q40376_MEDTR/442-451:0.10690);
DTP  (((((((((((((((Q40376_MEDTR/57-66,Q40376_MEDTR/472-481),Q40376_MEDTR/392-401),Q40376_MEDTR/512-521),(PRP_MEDSA/42-51,(PRP1_SOYBN/91-100,PRP1_SOYBN/231-240))),(Q40376_MEDTR/27-36,Q40376_MEDTR/502-511)),(Q40376_MEDTR/257-266,Q40376_MEDTR/207-216)),Q43414_CICAR/170-179),(PRP1_SOYBN/71-80,PRP1_SOYBN/201-210)),((((Q40376_MEDTR/77-86,PRP_MEDSA/67-76),Q43414_CICAR/160-169),Q40376_MEDTR/87-96),(Q43414_CICAR/40-49,Q43414_CICAR/60-69))),Q40376_MEDTR/452-461),Q40376_MEDTR/292-301),(Q43414_CICAR/190-199,Q40376_MEDTR/532-541)),Q40376_MEDTR/217-226),Q40376_MEDTR/267-276),Q40376_MEDTR/167-176,Q40376_MEDTR/442-451);
DTL  3.64623
RID  0.73068
RPH  ((((Q43414_CICAR/40-49:0.00000,Q40376_MEDTR/452-461:0.20989):0.00000,Q43414_CICAR/170-179:0.10006):0.11064,(((((Q43414_CICAR/190-199:0.32052,Q43414_CICAR/160-169:0.12274):0.00000,PRP_MEDSA/42-51:0.00000):0.00000,((Q40376_MEDTR/77-86:0.18599,Q40376_MEDTR/27-36:0.08016):0.06092,Q40376_MEDTR/502-511:0.00000):0.11817):0.00000,(PRP_MEDSA/67-76:0.13633,PRP1_SOYBN/231-240:0.12761):0.00000):0.00000,(((Q40376_MEDTR/292-301:0.12805,Q40376_MEDTR/217-226:0.00000):0.11040,(((Q40376_MEDTR/472-481:0.10381,Q40376_MEDTR/392-401:0.00000):0.00000,(Q40376_MEDTR/532-541:0.11381,Q40376_MEDTR/57-66:0.33380):0.00000):0.00000,(Q40376_MEDTR/267-276:0.00000,(Q40376_MEDTR/167-176:0.09563,Q40376_MEDTR/442-451:0.00000):0.10083):0.11153):0.00000):0.11577,((Q40376_MEDTR/512-521:0.10769,Q40376_MEDTR/257-266:0.00000):0.11985,(Q40376_MEDTR/207-216:0.10935,Q40376_MEDTR/87-96:0.23021):0.00000):0.01592):0.00000):0.00000):0.11064,((PRP1_SOYBN/71-80:0.12351,PRP1_SOYBN/91-100:0.00000):0.12351,PRP1_SOYBN/201-210:0.00000):0.12303,Q43414_CICAR/60-69:0.00000);
RTP  ((((Q43414_CICAR/40-49,Q40376_MEDTR/452-461),Q43414_CICAR/170-179),(((((Q43414_CICAR/190-199,Q43414_CICAR/160-169),PRP_MEDSA/42-51),((Q40376_MEDTR/77-86,Q40376_MEDTR/27-36),Q40376_MEDTR/502-511)),(PRP_MEDSA/67-76,PRP1_SOYBN/231-240)),(((Q40376_MEDTR/292-301,Q40376_MEDTR/217-226),(((Q40376_MEDTR/472-481,Q40376_MEDTR/392-401),(Q40376_MEDTR/532-541,Q40376_MEDTR/57-66)),(Q40376_MEDTR/267-276,(Q40376_MEDTR/167-176,Q40376_MEDTR/442-451)))),((Q40376_MEDTR/512-521,Q40376_MEDTR/257-266),(Q40376_MEDTR/207-216,Q40376_MEDTR/87-96))))),((PRP1_SOYBN/71-80,PRP1_SOYBN/91-100),PRP1_SOYBN/201-210),Q43414_CICAR/60-69);
RTL  3.85037
LNK  PRP1_SOYBN/201-210:P08012:J02746
LNK  PRP1_SOYBN/231-240:P08012:J02746
LNK  PRP1_SOYBN/71-80:P08012:J02746
LNK  PRP1_SOYBN/91-100:P08012:J02746
LNK  PRP_MEDSA/42-51:Q40358:M91078
LNK  PRP_MEDSA/67-76:Q40358:M91078
LNK  Q40376_MEDTR/167-176:Q40376:L23504
LNK  Q40376_MEDTR/207-216:Q40376:L23504
LNK  Q40376_MEDTR/217-226:Q40376:L23504
LNK  Q40376_MEDTR/257-266:Q40376:L23504
LNK  Q40376_MEDTR/267-276:Q40376:L23504
LNK  Q40376_MEDTR/27-36:Q40376:L23504
LNK  Q40376_MEDTR/292-301:Q40376:L23504
LNK  Q40376_MEDTR/392-401:Q40376:L23504
LNK  Q40376_MEDTR/442-451:Q40376:L23504
LNK  Q40376_MEDTR/452-461:Q40376:L23504
LNK  Q40376_MEDTR/472-481:Q40376:L23504
LNK  Q40376_MEDTR/502-511:Q40376:L23504
LNK  Q40376_MEDTR/512-521:Q40376:L23504
LNK  Q40376_MEDTR/532-541:Q40376:L23504
LNK  Q40376_MEDTR/57-66:Q40376:L23504
LNK  Q40376_MEDTR/77-86:Q40376:L23504
LNK  Q40376_MEDTR/87-96:Q40376:L23504
LNK  Q43414_CICAR/160-169:Q43414:X97354
LNK  Q43414_CICAR/170-179:Q43414:X97354
LNK  Q43414_CICAR/190-199:Q43414:X97354
LNK  Q43414_CICAR/40-49:Q43414:X97354
LNK  Q43414_CICAR/60-69:Q43414:X97354
AMK  xxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  Q40376_MEDTR/87-96
ASQ  HPVYKPSVEK
DSQ  CATCCCGTCTACAAGCCATCTGTAGAGAAG
TRN  11111111111111111
NAM  PRP1_SOYBN/201-210
ASQ  PPIYKPPVYK
DSQ  CCTCCTATTTACAAGCCACCAGTTTACAAG
TRN  11111111111111111
NAM  Q43414_CICAR/60-69
ASQ  PPIYKPPVEK
DSQ  CCCCCTATTTATAAGCCACCAGTAGAGAAA
TRN  11111101111011011
NAM  PRP1_SOYBN/231-240
ASQ  PPVYKPPVKK
DSQ  CCACCGGTGTACAAGCCCCCTGTTAAGAAA
TRN  11111101111011011
NAM  PRP_MEDSA/67-76
ASQ  PPVYKPPVVK
DSQ  CCACCTGTGTACAAACCCCCTGTCGTGAAA
TRN  11111101111011011
NAM  PRP1_SOYBN/91-100
ASQ  PPVYKPPVYK
DSQ  CCACCGGTTTACAAGCCTCCAGTTTATAAA
TRN  11111101111011011
NAM  Q40376_MEDTR/207-216
ASQ  PPVYKPHVEK
DSQ  CCTCCGGTGTACAAGCCACATGTTGAGAAG
TRN  11111111111111111
NAM  Q40376_MEDTR/257-266
ASQ  PPVYKPLVEK
DSQ  CCTCCGGTGTACAAGCCACTAGTTGAGAAG
TRN  11011111111111111
NAM  Q40376_MEDTR/217-226
ASQ  PPVNKPPVEK
DSQ  CCCCCAGTAAACAAACCTCCAGTAGAGAAG
TRN  11111101111011011
NAM  PRP_MEDSA/42-51
ASQ  PPVYKPPVEK
DSQ  CCACCGGTGTATAAGCCACCAGTTGAGAAA
TRN  11111101111011011
NAM  Q40376_MEDTR/292-301
ASQ  PPVEKPPVEK
DSQ  CCACCAGTTGAGAAGCCACCAGTTGAGAAG
TRN  11111111111111111
NAM  Q40376_MEDTR/392-401
ASQ  PPVHKPPVEK
DSQ  CCTCCAGTGCACAAGCCACCAGTTGAGAAA
TRN  11111101111011011
NAM  Q40376_MEDTR/512-521
ASQ  PPVHKPLVEK
DSQ  CCTCCAGTGCACAAGCCACTTGTTGAGAAA
TRN  11011101111011011
NAM  Q43414_CICAR/160-169
ASQ  PPVYTPPVEK
DSQ  CCCCCTGTCTACACACCACCTGTAGAGAAA
TRN  11111101111011011
NAM  Q40376_MEDTR/472-481
ASQ  PQVHKPPVEK
DSQ  CCTCAAGTGCACAAGCCACCAGTTGAGAAA
TRN  11111101111011011
NAM  Q40376_MEDTR/532-541
ASQ  PPVHKPPFEK
DSQ  CCACCAGTTCACAAGCCTCCATTCGAGAAG
TRN  11111111111111111
NAM  Q43414_CICAR/40-49
ASQ  PPVYKPPIEK
DSQ  CCGCCTGTTTACAAGCCACCAATAGAGAAA
TRN  10010101110011011
NAM  Q43414_CICAR/170-179
ASQ  PPVYKPPIEE
DSQ  CCTCCGGTATACAAGCCACCAATTGAAGAG
TRN  11111111111111111
NAM  PRP1_SOYBN/71-80
ASQ  PPVYKPPIYK
DSQ  CCTCCAGTTTATAAGCCACCCATTTACAAG
TRN  11111111111111111
NAM  Q40376_MEDTR/77-86
ASQ  PPAYKPPVEH
DSQ  CCACCTGCGTACAAACCTCCAGTAGAGCAC
TRN  11111101111011011
NAM  Q40376_MEDTR/502-511
ASQ  PPVYKPPVEN
DSQ  CCTCCGGTGTACAAGCCACCAGTTGAGAAC
TRN  11111111111111111
NAM  Q40376_MEDTR/27-36
ASQ  PPEYKPPVEN
DSQ  CCTCCCGAGTATAAACCACCAGTTGAGAAT
TRN  11111101111011011
NAM  Q43414_CICAR/190-199
ASQ  PPVYGPPYEK
DSQ  CCACCGGTTTACGGGCCTCCATATGAGAAG
TRN  11111111111111111
NAM  Q40376_MEDTR/267-276
ASQ  PPLHKPPVEK
DSQ  CCCCCACTTCACAAACCTCCAGTAGAGAAG
TRN  11011101111011011
NAM  Q40376_MEDTR/167-176
ASQ  PPLHKPLVEK
DSQ  CCCCCACTTCACAAACCTCTAGTAGAGAAG
TRN  11011101111011011
NAM  Q40376_MEDTR/442-451
ASQ  PPLHKPQVEK
DSQ  CCTCCACTTCACAAACCTCAAGTGGAGAAG
TRN  11011101111011011
NAM  Q40376_MEDTR/452-461
ASQ  PTEYKPPIEK
DSQ  CCAACTGAATACAAGCCACCAATTGAGAAG
TRN  11111111111111111
NAM  Q40376_MEDTR/57-66
ASQ  PPTHHPPIEK
DSQ  CCTCCAACCCACCATCCACCAATCGAAAAA
TRN  11111101111011011
//