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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View summary and phylogenies for PF01884 - PcrB)
FAM  PF01884
PID  PcrB
DES  PcrB family
IPR  IPR008205
ANO  6
ALN  251
AID  0.337197
APH  ((PCRB_PYRHO/14-249:0.37828,PCRB_METTH/11-245:0.27489):0.09416,PCRB_METJA/13-246:0.60623,((PCRB_STAAU/2-223:0.38199,PCRB_BACSU/2-226:0.47491):0.18940,PCRB_ARCFU/1-230:0.58926):1.20039);
ATP  ((PCRB_PYRHO/14-249,PCRB_METTH/11-245),PCRB_METJA/13-246,((PCRB_STAAU/2-223,PCRB_BACSU/2-226),PCRB_ARCFU/1-230));
ATL  4.18951
DNO  6
DLN  753
DID  0.442766
DPH  (PCRB_METTH/11-245:0.35013,PCRB_PYRHO/14-249:0.27260,(((PCRB_STAAU/2-223:0.38362,PCRB_BACSU/2-226:0.40914):0.10591,PCRB_ARCFU/1-230:0.45515):0.58698,PCRB_METJA/13-246:0.38027):0.10372);
DTP  (PCRB_METTH/11-245,PCRB_PYRHO/14-249,(((PCRB_STAAU/2-223,PCRB_BACSU/2-226),PCRB_ARCFU/1-230),PCRB_METJA/13-246));
DTL  3.04752
RID  0.337197
RPH  ((PCRB_PYRHO/14-249:0.37828,PCRB_METTH/11-245:0.27489):0.09416,PCRB_METJA/13-246:0.60623,((PCRB_STAAU/2-223:0.38199,PCRB_BACSU/2-226:0.47491):0.18940,PCRB_ARCFU/1-230:0.58926):1.20039);
RTP  ((PCRB_PYRHO/14-249,PCRB_METTH/11-245),PCRB_METJA/13-246,((PCRB_STAAU/2-223,PCRB_BACSU/2-226),PCRB_ARCFU/1-230));
RTL  4.18951
LNK  PCRB_ARCFU/1-230:O29844:AE001076
LNK  PCRB_BACSU/2-226:O34790:Y15254
LNK  PCRB_METJA/13-246:Q58647:U67565
LNK  PCRB_METTH/11-245:O26652:AE000838
LNK  PCRB_PYRHO/14-249:O58851:AP000005
LNK  PCRB_STAAU/2-223:Q53726:M63176
AMK  xxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  PCRB_METTH/11-245
ASQ  HDILRERK.IHLTLIDPEEQTPEEAVEIARAAIRGGTDGIMLGGST-TDSSELDNTARALREN--IDVPIILFPGNTTGVSRYADAIFFMSLLNSTNPYWIIG-------AQALGAATVKKMG--IEALPMGYLVVEPGGT--VGWVGDTKPVPRNKPDIAAAYAMAAEFLGMRLFYLEAGSGAPEHVPEEMIALVKRCTDQILIVGGGIRSGEDAARVAGAGADVVVTGTVVENSD-NVEDKIREIVEGM
DSQ  CATGATATTCTTAGGGAGAGGAAG...ATACACCTTACCCTCATAGACCCCGAGGAGCAGACCCCTGAGGAGGCCGTTGAGATAGCCAGGGCTGCCATAAGGGGAGGCACCGATGGTATAATGCTTGGAGGGTCAACC---ACAGATTCCAGTGAACTTGATAACACAGCCAGGGCCCTCAGGGAGAAC------ATAGACGTCCCCATAATACTCTTCCCGGGTAACACCACGGGTGTCAGCCGCTACGCCGATGCAATATTCTTCATGAGTCTCCTTAACTCCACAAACCCCTACTGGATCATAGGT---------------------GCCCAGGCCCTGGGTGCAGCCACCGTCAAGAAGATGGGT------ATAGAGGCTCTCCCCATGGGCTACCTGGTGGTTGAACCAGGGGGTACG------GTTGGATGGGTCGGTGACACCAAGCCGGTCCCCAGGAACAAACCCGACATTGCAGCCGCCTATGCCATGGCCGCTGAATTCCTTGGCATGAGGCTCTTCTACCTTGAGGCAGGTTCAGGGGCCCCTGAACATGTGCCTGAGGAGATGATAGCCCTTGTTAAGCGATGCACAGATCAGATACTCATAGTTGGCGGTGGTATAAGGAGCGGTGAGGATGCTGCAAGGGTTGCGGGTGCAGGTGCAGACGTCGTGGTGACGGGTACCGTTGTGGAGAACAGTGAC---AACGTTGAGGACAAGATCAGGGAGATCGTTGAGGGTATG
TRN  10010101100011001
NAM  PCRB_PYRHO/14-249
ASQ  HEKLEKKK.LHFVLIDPDDTSPEVAGKLARVCEELGVDAIMVGGSTGAEGEVLDNVVRSIKDN--SSLPVILFPGSHGGISRYADAIFFMSLLNSRNPFFITG-------AQALGAFTVKKFG--IEPIPMAYIVVEPGET--VGWVGDARPIPRHKPKLAAAYALAGQYLGMRLVYLEAGSGAPEPVPEEMVRVVKSVIDVPLIVGGGIKSGEQAKKLIKSGADIIVTGTAIEKAK-SLEEARKRLEAIR
DSQ  CATGAAAAATTAGAGAAGAAAAAA...CTTCATTTTGTGCTGATAGATCCTGATGATACATCTCCCGAGGTAGCAGGTAAACTGGCCAGAGTATGTGAAGAACTTGGAGTAGACGCCATAATGGTTGGGGGTTCAACTGGAGCTGAAGGTGAAGTTTTAGACAACGTTGTTAGATCGATAAAAGATAAT------TCTTCACTTCCAGTAATACTCTTTCCTGGCTCTCACGGGGGAATAAGCAGATATGCTGATGCCATTTTCTTTATGAGCTTACTTAACTCCAGAAATCCCTTCTTCATTACTGGG---------------------GCCCAAGCATTAGGCGCATTTACTGTTAAAAAATTTGGA------ATAGAACCGATTCCAATGGCTTATATAGTAGTTGAACCAGGAGAAACC------GTTGGATGGGTTGGGGATGCTAGGCCAATCCCGAGGCATAAACCTAAGCTTGCAGCTGCTTACGCCCTTGCCGGCCAATACCTTGGAATGAGACTAGTATACTTAGAAGCTGGGAGTGGAGCCCCTGAACCAGTACCAGAAGAGATGGTAAGAGTAGTAAAAAGCGTCATAGATGTACCCCTCATAGTTGGAGGGGGTATAAAGTCTGGAGAGCAAGCTAAAAAGTTGATAAAATCGGGGGCCGATATAATAGTTACTGGAACTGCTATTGAAAAAGCAAAG---AGTTTAGAAGAAGCTAGAAAAAGACTTGAAGCCATTCGA
TRN  10010101100011000
NAM  PCRB_METJA/13-246
ASQ  NQIIEEEGaVYLTLLDPEEENIEEIAENV----KDYADAIMVGGSIG--IVNLDETVKKIKKI--TKLPIILFPGNVDGLSRYADAVFYMSLMNSANTYWVVT-------APTLGAITILKYN--LEPIPMAYLCIEPAKKTAVGYVGEIREIPQNKPKITAMYCLSAKFFGMRWAYLEAGSGASYPVNNETIALSKKLSGINIIVGGGIRKPEIAYEKVLAGADAIVTGNLLEENPKAVEMMYDAIKKAG
DSQ  AATCAAATTATTGAAGAGGAAGGAgctGTCTATTTAACTCTATTAGACCCAGAAGAAGAAAATATTGAAGAGATAGCTGAAAATGTT------------AAGGATTATGCAGATGCAATAATGGTTGGAGGAAGTATTGGA------ATTGTTAATTTAGATGAAACAGTTAAAAAAATAAAAAAGATA------ACTAAGCTCCCAATAATTCTATTCCCTGGAAATGTTGATGGATTGTCAAGATATGCTGACGCTGTGTTTTACATGAGCCTAATGAACTCAGCAAACACTTATTGGGTTGTAACA---------------------GCCCCAACTTTAGGGGCGATAACAATTTTAAAATATAAT------TTAGAGCCAATTCCAATGGCTTATCTCTGCATAGAACCAGCAAAAAAAACAGCCGTTGGTTATGTTGGGGAGATTAGAGAGATACCTCAAAACAAACCAAAAATAACTGCAATGTATTGTTTATCTGCAAAGTTCTTTGGAATGAGATGGGCTTATTTAGAGGCTGGTAGTGGGGCATCTTACCCAGTAAACAATGAGACTATAGCCTTATCAAAAAAACTCTCTGGAATTAATATAATTGTTGGTGGAGGAATTAGAAAGCCAGAGATTGCCTATGAGAAAGTTTTAGCTGGAGCTGATGCTATAGTTACTGGTAATTTGTTGGAAGAGAATCCTAAAGCTGTTGAGATGATGTATGATGCTATTAAAAAAGCTGGA
TRN  10010101110011000
NAM  PCRB_ARCFU/1-230
ASQ  MRWRKWR-.-HITKLDPDRTNTDEIIKAV---ADSGTDAVMISGTQ---NVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSA--VARVTKAL-CNIDKELAASYALVGEKLFNLPIIYIEY-SGTYGNP-ELVAEVKKVLDKARLFYGGGIDSREKAREMLRY-ADTIIVGNVIYEKG------IDAFLETL
DSQ  ATGCGATGGAGAAAGTGGAGA---...---CACATCACAAAGCTCGACCCTGACAGGACAAACACCGATGAAATCATAAAGGCTGTA---------GCGGATAGTGGAACTGATGCCGTGATGATTTCGGGGACGCAG---------AACGTAACTTACGAGAAGGCCAGAACATTAATCGAAAAAGTTTCCCAGTACGGCCTCCCAATAGTTGTTGAGCCCTCAGACCCGTCAAACGTGGTCTATGACGTTGACTACCTCTTTGTTCCAACAGTTCTGAACTCTGCAGATGGGGACTGGATTACGGGAAAGCATGCGCAGTGGGTCAGAATGCATTACGAGAATCTGCAGAAATTCACTGAAATAATCGAATCCGAGTTCATTCAGATTGAGGGTTACATCGTGCTAAATCCCGATTCCGCC------GTTGCAAGAGTGACGAAGGCCCTT---TGCAACATAGACAAGGAGCTTGCCGCAAGCTACGCCTTGGTTGGAGAGAAGCTGTTCAATCTGCCCATTATTTACATCGAGTAC---AGCGGCACCTACGGCAATCCA---GAGCTTGTGGCTGAGGTGAAGAAAGTTCTCGACAAGGCGAGACTTTTCTACGGAGGAGGGATTGACAGCAGGGAAAAGGCGAGGGAGATGCTCAGGTAT---GCAGACACCATAATAGTTGGAAACGTAATCTATGAGAAGGGT------------------ATCGATGCGTTCCTTGAAACGCTA
TRN  10010101100011000
NAM  PCRB_BACSU/2-226
ASQ  YDVTEWK-.-HVFKLDPNKDLPDEQLEIL---CESGTDAVIIGGSD---GVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVG-------MHQKAMKEYGELMSMEEIVAEGYCIANPDCK--AAALTEAD-ADLNMDDIVAYAR-VSELLQLPIFYLEY-SGVLGDI-EAVKKTKAVLETSTLFYGGGIKDAETAKQYAEH-ADVIVVGNAVYEDF---DRALKTVAAVK
DSQ  TACGATGTAACGGAGTGGAAG---...---CATGTCTTTAAACTCGATCCAAATAAAGATTTGCCTGACGAACAGCTGGAGATTCTT---------TGCGAATCAGGAACGGATGCGGTCATTATCGGAGGAAGCGAT---------GGTGTGACAGAGGATAATGTCCTGCGGATGATGTCTAAGGTAAGACGGTTTTTGGTGCCGTGTGTCCTAGAGGTATCAGCGATTGAAGCGATTGTTCCCGGCTTTGACTTATATTTTATTCCGAGTGTATTAAACAGCAAAAACGCGGATTGGATTGTCGGA---------------------ATGCACCAGAAAGCCATGAAGGAATACGGAGAACTGATGTCTATGGAAGAAATCGTGGCGGAGGGCTACTGCATCGCAAATCCAGATTGCAAA------GCCGCGGCACTGACTGAAGCGGAC---GCCGATCTGAATATGGATGATATTGTCGCCTATGCGCGT---GTGTCGGAGCTGCTGCAACTGCCGATTTTTTATTTAGAATAC---AGCGGCGTGCTTGGAGACATA---GAAGCTGTCAAGAAAACGAAGGCTGTATTGGAAACGTCCACCTTGTTTTACGGCGGCGGCATCAAGGATGCGGAAACGGCCAAGCAGTACGCAGAGCAT---GCGGACGTGATCGTTGTAGGCAATGCGGTGTATGAAGATTTT---------GACAGGGCTTTGAAAACAGTAGCGGCTGTGAAA
TRN  10010101100011000
NAM  PCRB_STAAU/2-223
ASQ  YDIKKWR-.-HIFKLDPAKHISDDDLDAI---CMSQTDAIMIGGTD---DVTEDNVIHLMSRVRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVVFHNG-------TLLEALKTYGHSIDFEEVIFEGYVVCNADSK--VAKHTKAN-TDLTTEDLEAYAQMVNHMYRLPVMYIEY-SGIYGDV-SKVQAVSEHLTETQLFYGGGISSEQQATEMAAI-ADTIIVGDIIYKD-------IKSFKNSK
DSQ  TATGACATTAAAAAATGGCGC---...---CATATTTTTAAATTAGACCCAGCTAAACATATTTCAGATGATGATTTAGATGCGATT---------TGTATGTCTCAAACAGATGCAATTATGATTGGTGGAACTGAT---------GACGTTACTGAAGATAATGTCATTCATTTAATGAGCAGAGTAAGAAGATACCCATTGCCTTTAGTACTTGAAATATCAAACATCGAAAGTGTAATGCCTGGTTTTGATTTTTATTTTGTACCTACAGTACTGAACAGTACAGATGTTGTATTTCACAATGGT---------------------ACATTATTAGAAGCGCTTAAAACATATGGACATAGTATAGATTTTGAGGAAGTAATATTTGAAGGGTATGTCGTGTGCAATGCTGATAGCAAA------GTGGCAAAACATACCAAAGCAAAT---ACAGATTTAACAACAGAAGATTTAGAAGCATATGCCCAAATGGTCAATCATATGTATCGATTACCGGTTATGTATATAGAGTAT---AGTGGCATTTATGGCGACGTA---TCAAAGGTTCAAGCTGTCTCAGAACATCTAACAGAAACGCAACTTTTTTATGGTGGCGGTATTTCCTCAGAACAACAAGCGACAGAGATGGCAGCTATT---GCAGATACAATTATCGTCGGTGATATTATTTATAAAGAT---------------------ATTAAAAGCTTTAAAAACAGTAAA
TRN  10010101100011000
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