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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF07484 - Collar)
Phage Tail Collar Domain
(Pfam reference: accession no. PF07484)
(Interpro reference: accession no. IPR011083)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
40 sequences @ 103 aa
(ave. pairwise identity: 0.39)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 17.09)
nucleotides
(available for above)
39 sequences @ 309 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 14.87)
amino acids, restricted set
(corresp. to available nt seqs)
39 sequences @ 103 aa
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 17.24)