EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06031 - SERTA)
SERTA motif
(Pfam reference: accession no. PF06031)
(Interpro reference: accession no. IPR009263)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 38 aa
(ave. pairwise identity: 0.38)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.38)
nucleotides
(available for above)
6 sequences @ 114 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 2.61)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 38 aa
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 3.80)