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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05379 - Peptidase_C23)
Carlavirus endopeptidase
(Pfam reference: accession no. PF05379)
(Interpro reference: accession no. IPR008041)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
12 sequences @ 89 aa
(ave. pairwise identity: 0.31)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 9.26)
nucleotides
(available for above)
11 sequences @ 267 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 6.06)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 89 aa
(ave. pairwise identity: 0.30)
New Hampshire format
(total tree length: 8.90)