EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05004 alignment
(7 sequences with 1080 bp)


Q9GP12_IXORI/28-325 AGCGACGAGGAGTCCAACGCAGACACGGCGAGCGTGCTG---AGCTGCGCCTCGGAGTCTCGCTGTGGCAGTGACGGCACCGTTGGAGACCCAGAAGCGGAGGAGGCTGTGCTGCATGACGACTTTGAAGACAAACTCAAGGAGGCCATCGACGGAGCTTCGCAGAAGAGT---------GCCAAAGGACGGCTGTCGTGCCTGGAGGCGATTCGCAAGGCCTTTTCCACCAAATACCTGTACGACTTCCTCATGGACAGACCGAGCACGGTGTGCGACCTGGTGGAGCGTGGGGTGCGCAAGGGCCGAGGG---GAGGAGGCGGCCCTGTGCGCCACTCTCGGGGCCCTGGCCTGCGTCCAGCTCGGGGTCGGGGCCGAGGCGGACGCCCTGTTCGACGCCCTGCGCCAGCCGCTCTGCACTTTGCTGCTTGACGGG---GCCCAGGGGCCCTCCCCCAGGGCCAGGTGTGCCACTGCCCTCGGCCTCTGCTGCTTCGTGGTGGACTCGGACAACCAGCTGGTGCTGCAG------CCGTGCATGGAGGTGCTCTGGCAGGTGGTGGGT---GCCAAGGCGGGCCCCGGCTCTCCG------------------------GTGCTCCAGGCAGCGGCCCTGCTCGCCTGGGGCCTCCTGCTCAGCGTGGCTCCCGTCGACCGCCTGCTG...GCGCTCACGCGCACGCACCTGCCCCGGCTGCAGGAG------------------CTGCTGGAGAGCCCCGACCTGGACCTGCGCATTGCGGCCGGGGAGGTGATCGCCGTCATGTACGAGGGGGCCAGG------------------------------------GACTACGACGAGGAC---------------------------TTT---------GAGGAG---------CCCTCGGAGTCCCTG------------------------------TGTGCCCAGCTGCGCCAGCTGGCCACGGACAGC---CAGAAGTTTCGGGCCAAGAAGGAGCGGCGCCAGCAGCGCTCCACCTTCAGGGACGTCTACCGGGCCGTCAGG
Q9UJ88_HUMAN/198-507 AGTGACGATGAGGCAGCCAGTGAGGCCCGCAGCACCGCCAGTGAATGCCCCAGCCTTCTCAGCACCACTGCAGAGGACAGCCTTGGGGGGGATGTCGTGGATGAGCAGGGCCAGCAGGAAGACCTTGAGGAAAAGCTGAAGGAGTATGTGGACTGTCTCACAGACAAGAGT---------GCCAAGACCCGGCAGGGTGCTCTTGAGAGCCTGCGCCTGGCCCTAGCGTCCCGCCTACTCCCCGACTTCTTGCTGGAGCGCCGCCTCACGCTAGCCGATGCCCTGGAAAAGTGCCTCAAGAAAGGGAAGGGC---GAGGAACAAGCCCTGGCTGCTGCTGTGCTAGGCCTGCTCTGCGTGCAGCTGGGCCCTGGACCTAAGGGTGAGGAGCTGTTTCACAGCCTGCAGCCTCTGCTGGTCTCTGTGCTCAGTGACAGC---ACAGCTAGCCCTGCTGCCCGGCTCCACTGTGCTTCTGCCCTTGGCCTGGGCTGCTACGTGGCTGCCGCTGACATCCAGGACCTGGTCTCTTGCCTTGCCTGCTTAGAAAGTGTTTTCAGCCGGTTCTATGGCTTGGGGGGCAGCTCCACAAGTCCTGTGGTTCCTGCCAGC---CTGCACGGCCTGCTCTCTGCTGCCCTGCAGGCCTGGGCATTGCTGCTCACCATCTGCCCTAGCACCCAAATCAGC...CACATCCTTGACAGGCAGCTGCCCCGGCTGCCCCAG------------------CTCTTGTCCAGTGAAAGTGTGAACCTGCGGATCGCTGCCGGTGAAACCATTGCACTGCTCTTTGAGCTTGCCCGG------------------------------------GACCTTGAGGAGGAG---------------------------TTT------GTTTACGAG---------GACATGGAGGCCCTC------------------------------TGCAGTGTCCTGCGCACTCTGGCCACTGACAGT---AACAAGTACCGTGCCAAGGCTGATCGTCGGCGCCAGCGCTCTACTTTCCGCGCCGTGCTGCACTCCGTGGAG
Q9BVE4_HUMAN/42-347 AGTGATGAAGATGCATCAATTGAAACAATGAGCCAT---------TGCAGTGGTTATAGCGATCCTTCCAGTTTTGCTGAAGATGGACCAGAAGTCCTTGATGAGGAAGGAACTCAAGAAGACCTAGAGTACAAGTTGAAGGGATTAATTGACCTAACCCTGGATAAGAGT---------GCGAAGACAAGGCAAGCAGCTCTTGAAGGTATTAAAAATGCACTGGCTTCAAAAATGCTGTATGAATTTATTCTGGAAAGGAGAATGACTTTAACTGATAGCATTGAACGCTGCCTGAAAAAAGGTAAGAGT---GATGAGCAACGTGCAGCTGCAGCGTTAGCATCTGTTCTTTGTATTCAGCTGGGCCCTGGAATTGAAAGTGAAGAGATTTTGAAAACTCTTGGACCAATCCTAAAGAAAATCATTTGTGATGGG---TCAGCTAGTATGCAGGCTAGGCAAACTTGTGCAACTTGCTTTGGTGTTTGCTGTTTTATTGCCACAGATGACATTACTGAACTATACTCAACTCTGGAATGTTTGGAAAATATCTTCACTAAATCCTAT---CTCAAAGAGAAAGACACTACT---GTTATTTGCAGCACTCCTAATACAGTGCTTCATATCAGCTCTCTTCTTGCATGGACACTACTGCTGACCATATGCCCAATCAATGAAGTGAAG...AAAAAGCTTGAGATGCATTTCCATAAGCTTCCAAGC------------------CTCCTCTCTTGTGATGATGTAAACATGAGAATAGCTGCTGGTGAATCTTTGGCACTTCTCTTTGAATTGGCCAGA------------------------------------GGAATAGAGAGTGAC---------------------------TTT------TTTTATGAA---------GACATGGAGTCCTTG------------------------------ACGCAGATGCTTAGGGCCTTGGCAACAGATGGA---AATAAACACCGGGCCAAAGTGGACAAGAGAAAGCAGCGGTCAGTTTTCAGAGATGTCCTGAGGGCAGTGGAG
Q9VQI5_DROME/20-322 TCTGAGGACGAGTCC------------------------------TTTGACAATGTGAGCGTTTACTCTCATATGTCCGAAGTCGCATCCTCGGAGGCCACCGACGAGCTGGCCAATGAGCGTTTCGAGGAGAAGTTCGAGAAGGCCCTGGAACAGGCCACCGAGAAGTCG---------GCCCAGACACGTGTGCAGGCTCTGCAAGCGATTTGCGAACTGCTCATGCACCGCTACATGCCGGACTTCGTGGAGGACCGCAAGATGACCCTGATGGATTTCGTGGAGAAGAGCATCCGTCGAGGCAAGGGC---CAGGAGCAGGTGTGGGGCGCACGACTCGCGCCCCTGCTGGTGCTCCAAATGGGC---------GGGGATGAAGGCATATCCAAGGCGATGAATCAATTCCTGTTGAACACCGTTCAGGACAAG---TCCGTGGGCTTCGATGCCCGTGCCAAGTGCTGCACAGCTGTGGGATTGTTGAGCTTCCTGGGCTGCGAGGATGTTGGGGAGTTGGTACACCTGATGCAGAGCTTCGAGGCCATCTTCGCAGGCAGTTAT---TTGCGTGGCGATGACAAGACACCGGTATCCGTCACCGCCGAAGCTGGGACTTTCCATGCGGAGGCCTTGAACGCCTGGGGGCTTCTACTAACACTTATACCTTCGGGGGATTTTGTT...TCGTTGATGACCACTGGCCAAAACATGTTTCCATCTATTAAGAAGTTCTTGGGTCTCTTGCAATCTACACATTTGGACGTCCGCATGGCCGCTGGCGAGACCATTGCTTTAATTCTGGAGTCGGGACGT------------------------------------GCTCACGAAGAGGAT---------------------------TTC------CTAGAAGAT---------GACATCGCTGAGTTA------------------------------TCGGAGGCCGTCAAGCAGCTGGCCACGGATTCG---CATAAGTACCGCGCCAAGCGCGATCGCAAGGCCCAGCGTGCCACCTTCCGTGATGTGCTGCGATACCTGGAG
Q20965_CAEEL/25-295 TCTGATTCGGATGACAGCGAATCATCAGCC------------------------------------TACACGTATAATGAAGATATTCAGTCGATTATGGGTGATGTAGAAGATATGAACGATGTATATGATCAATTGGTCGATAATTTGGATAGAGCGCAAGACAAAAAC---------TCCACAACCAGAATTGACGGATTACACAGAGTGAATCTTGCGTTGACGGCGAAGCCAGCTCCAGAATTCATAAACAGAAATAAAGAAACAATCATGGCAGTTTGCTCAAGGATGGCGAATAAACCGGATAGT---GAAGCCCAATTTCTTGCA---AGGCTCGTTGGACTTGTTGCAGTACAA------GCTGGAGAAGAAATTTCAGAGATGATTGCCGAGCCAATGTCACAAATGCGTACAATTCTTATGGATGCC---TCGAGATGTGTATTTCTCCGAACGGCCTGTGCTACTTCATTAGCCATCGTTACAAGAATCGCATGTAGTGAAGATGAGGAAGTGACGGCAAATGCCAAGGCATGCAGA------TTTGCCTGGGCACAC---ACCAAAGTCTCTGGATCTGCTAACGATATCGGTCATGCCAAA---------------------------------------------CTTACAATCAATGATGCA------------...---------GTTGCCGACCAGCCCAAAATTGTTACT------------------CTTTTATCGTCAAATCAACTCGAAGTGAGATTGGCTGCCGCTGAAACGCTAGCATTTTTACACGAATTCATGCAA------------------------------------GATGCTCGTCCAGGA---------------------------TTT------CGCTTTCCG---------AATAAAGAGCATGTA------------------------------CTCAGTCTTCTCGATCAAATGGTGAATGATAGC---TCGAAGAAAAAAACTAAAAAAGACAAAAGGGCTCAGCGATACGCAGTCAGAGATATAAGAGCATTTATTGCT
Q9SFY3_ARATH/43-351 AGTGATGATGATACAAGTAGTGTAAGCTCTTCCTCCACCATGCCATCTGAGAGATTGTTGAATCCTGGAGCTCAACTAGAG------------------------------------AGCAAGCTTTGGCCACCATTGTTGACGCATTTAACAGCGACTTGCAGTATGAGT---------TTGTTGAAAAGAAGTAAATATCTGACACTCTTTCCTATTTTAGTT---------------------TTATCAATCCACGAGTTTGCCACTTTATTGCACCAGTGTTTACACTGCACCAAGAAAGGGTCTACT---AAGGAGACTTCATTAGCAACTCATGTCATTGGGTTGCTAGCGTTAACTGTTGGACTCGGGGATCATGCACAAGAGGTTTTGGAAGAATCTGTCACTCCTCTGTCTCAAGCCCTTAAATCTGGT---CGTGAAATCTTGAAAATA---ACTTCGATACTTGAGTGTTTAGCAGTCATAACCTTCGTTGGCGGGAATGATCCAGAGCAAACCGAG---------AAATCTATGCAGATTATCTGGCAAATGATCCACCCC---AAACTAGGGTCTAAT------GTTGTGGCAACTAAACCTTCACCTGCTGTAATAAGTGCTGTTGTATCTTCCTGGGCTTTTCTGCTCACAACAGTTGATCGGTGGACTCTAGGTcctAAAATTTTTCAAGAGACTGTAACTTATCTCTCTACA------------------TTGTTGGAAAAGGATGACCGATCTGTACGTATAGCTGCTGGTGAAGCGCTTGCAGTAATATATGAGTTGGGAACTCTAGAGAAGTTCGCTGCCGAAGTC---------AAAGGGTCTGCTAATGGA---------------------------TCA------GTGAAAGAAGGAGGTGTCTCTCAGGAAGCATTGATGCACATGCATGGCTTGAAAGCTAAAGTCACTAAACAAGTTAGAGAGCTCTCTGTAGAGGCAGGTGGTAAAGGTTCTGCTAAGAAAGATCTCAACACCCAACGAAATTTGTTCAAAGATCTTGTTGAATTTCTTGAG
O42973_SCHPO/12-322 TCTGACGATGACTCT---TTTGACACTATCAGCATACTTAGTGGCTCCATGGATCAGTTAAGTGTTGGTTCTATGGAGGAT------TCAGGTATTCTT------AAAGGTTCAAAAACTTGGCTTGAAGAA---TTGGAGTCCACTATTGATGACTTGATAGAAGTAAAAAAAATTGGCGCCAAAGAACGAGAAGAACATCTAGAGAAGATATATGTAATATGC---ACACGACATTACGCTAAAAGGATTTCCGAAAATGTAGCATCTTTGGAAGAATTACTTTTAAAAATTTTCAACGGACCTCGTTCTGACAAAGAATTGATTTTGACAATTCGGATCATGTGTACTTTTTGTCTGGCT------TCTGTTTTTCAAGTGGAAGAGCTGTGGACGAAGACAGAAGGAAGATTTAACGCATTGGCAAATGATGCAGAATCTTCTGGCATCAAGTGT---GAATCCATACTT---TGTTTCTCTTTATTGACAGCTCTTTTAGACTCCGAAGCAGATGTAATTGAA---------------TTTGGA---GACTTTTTAATCAGCATT---TTAGAGTCTGATGGTGCT------GTTGTGAATTCTGAAGATGATGAAGGTGTGGTTGGGTGTGCATGCCAAGCTCTAGGTTTGCTTTTAACTTGCGTCACAACT---------GAAagtGAATTTTTAGCTTCGGCGGCTGAGGCTCTTTCTGAG------------------CAACTAGATGCAGCTAGTATTGATGTTCAGTTAGCAGCGGGCCAAGCTCTTGCTGCGTTGTTCGAAAGGGTTAAT------------------GAAATTAGGCCGGATAAAGATGAAGAGAATGACGAAAGTGATGTTTCTCAAACGTCAAAATTTGATGATATTATCCCC---------GACCGTAATCAATTA------------------------------CTTATTACCCTTCGCGACCTTGCTAGTGAATCT---TCTAAAAGCATTGGTAAAAAACAAAGAAAGGTTCTCCATCAGGTTTTTCGTAACGTTCTACAGACGATCGAG