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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04731 alignment
(8 sequences with 588 bp)


Q91622_XENLA/13-142 ATGTAC---CCCAATCCTGTTAGGCACCCTGGC------------------------------------------CTCAATTTGAATCCTCAGAACTATGTA---------------CCTGCGCCCCCTCAGTATTCTGATTTCCCCAGCTATCATCATGTCCCTGGGATT............---AACAGTGATCCACACCATGGGCAGCCTGGT------------GGCACCTGGAGCTCT---TAT---ACCCCCAGCAGAGAAGACTGG...CACCCCTATGGACCAGGACCTGGAGCTTCTTCAGCTAACCCAACACAGATCGCT------------------------...---------TTCAGTCCTTCTGACTATAACCCTGTGCAGCCACCG------------------------------------...---GGATCTGGACTTTTG------------------------CCGCCTTCTATAAATTCCTCTGTTCCCCCTCTGTCCCCCAGCGCACAAAGGGCAGATCCCTACGAATGGATGAGGCGCACAGGGGTCCCCACCACCACCACCACC
HMD1_CHICK/1-132 ATGTAT---CCCAGTCCCGTCCGGCATCCCGGC------------------------------------------CTCAACCTCAACCCCCAGAACTACGTG---------------CCGGGGCCACCCCAGTACTCGGACTTCGCCAGCTACCACCATGTGCCAGGGATT............---AACAACGACCCTCACCATGGGCAGCCCGCA------------GCCGCCTGGGGCTCACCCTAC---ACCCCTGCCAAGGAGGACTGG...CACTCATACGGCACC---------GCTGCCGCCTCCGCCGCCACCAACCCGGGGCAGTTTGGATTT------------...------------AGCCCCCCGGATTTTAACCCCATGCAGCCCCAT------------------------------------...GCGGGCTCTGGACTCCTG------------------------CCTCCAGCCATCAGCAGCTCGGTGCCACAGCTGTCCCCTAATGCACAGAGGCGCACCCCGTACGAATGGATGAGGCGCAGTATTCCCAGCACCAGCAGCAGCGGC
Q90262_BRARE/13-147 ATGTATCACCAAGGAGCGGTTCGTCGATCTGGC------------------------------------------ATCAGTCTTCCACCACAGAACTTTGTT------------------TCCACACCTCAGTATTCAGATTTTACAGGATACCATCATGTGCCC------............---AATATGGAGACA---CACGCACAGTCGGCA------------GGGGCATGGGGCGCTCCTTATGGCGCTCCG---AGAGAGGACTGG...GGCGCCTACAGCCTCGGACCTCCA------------AATTCTATTTCTGCACCTATGAGCAATTCATCTCCGGGACCA...GTTTCCTATTGCTCGCCC---GATTATAACACCATGCACGGCCCT------------------------------------...---GGATCGGCGGTTCTT---------------------CCTCCGCCACCTGAAAATATTCCTGTGGCCCAACTATCCCCAGAGAGAGAAAGGCGTAATTCCTATCAGTGGATGAGCAAAACCGTCCAGTCGTCATCAACCGGCAAA
P79788_CHICK/13-172 ATGTAC---CCCGGCCCCGTTCGCCACTCGGGGGGG---------------------------------------CTCAACCTGGCGGCGCAGAACTTCGTG------------------GGCGCCGCGCAATACGCGGACTACGGCGGCTACCAT---------------............GTGAACCTCGACGGCGCG---CAGTCCCCCGGG------------CCGGTCTGGGCCGCGCCCTACGCCGCTCCTCTCCGCGACGACTGG...GGGGCCTACGGGCAGGGAGCCCCTCCGCCCGCCGCCGCCGCCGCCGTGCACGGTCTCAACGGCGGCTCCCCCGCCGCAgcgATGGCCTACAGC---CCCGTCGACTTCCACCACCACCACCACCACCACCCGCACGCCCACCACCACGTCGGTCCCGAGACGcacTGCTCCGCCGGGGGGATGCAGACTCTCGGTGCCGCCCCCGCCGCCGCCGCCGCCTCCGCCGCCCCCGAGCCGCTGTCCCCCGGCGGGCAGCGCCGCGGCCTCTGCGAGTGGGTGAGGAAACCGGCGCAGGCCCCGCTCGGTAGCCAA
CDX2_HUMAN/13-180 ATGTAC---CCTAGCTCCGTGCGCCACTCTGGCGGC---------------------------------------CTCAACCTGGCGCCGCAGAACTTCGTC------------------AGCCCCCCGCAGTACCCGGACTACGGCGGTTACCAC---GTGGCGGCCGCAgctgcagcggcaGCGAACTTGGACAGCGCG---CAGTCCCCGGGG------------CCATCCTGGCCGGCAGCGTATGGCGCCCCACTCCGGGAGGACTGG...AATGGCTACGCGCCCGGAGGCGCCGCGGCCGCCGCCAACGCCGTGGCTCACGGCCTCAACGGTGGCTCCCCGGCCGCAgccATGGGCTACAGCAGCCCCGCAGACTACCATCCGCACCACCACCCGCATCACCACCCGCACCACCCGGCCGCGGCGCCTTCC...TGCGCTTCTGGGCTGCTGCAAACGCTCAACCCCGGCCCTCCTGGGCCCGCCGCCACCGCTGCCGCCGAGCAGCTGTCTCCCGGCGGCCAGCGGCGGAACCTGTGCGAGTGGATGCGGAAGCCGGCGCAGCAGTCCCTCGGCAGCCAA
CDX4_HUMAN/13-171 ATGTAC---CCGGGCACTCTCATGAGCCCTGGGGGCGACGGCACAGCTGGGACAGGCGGCACAGGGGGCGGTGGGAGTCCGATGCCAGCCTCCAATTTCGCT------------------GCGGCACCGGCTTTCTCGCACTATATGGGGTATCCTCATATGCCC------............---AGCATGGATCCT---CACTGGCCGTCTCTG------------GGAGTCTGGGGCTCACCCTACAGTCCCCCG---CGAGAAGACTGG...AGCGTGTAT---CCTGGGCCGTCTAGTACAATGGGCACAGTGCCGGTGAACGACGTGACCTCT---AGCCCCGCCGCT...------TTCTGCTCG---ACCGACTACAGCAACTTG---GGCCCTGTGGGCGGTGGAACTAGCGGCAGCAGCCTACCAGGCcagGCTGGCGGGTCGCTTGTC---------------------------CCGACGGACGCAGGCGCCGCCAAGGCCAGTTCCCCCAGCAGGAGCCGCCACAGCCCCTATGCATGGATGCGCAAGACGGTGCAGGTGACGGGGAAAACCAGG
CDX4_MOUSE/13-169 ATGTAC---CCAGGCACTCTCAGGAGCCCTGGAGGAAGCAGTACAGCCGGAGTGGGCACCTCTGGGGGCAGTGGTAGTCCTCTGCCTGCCTCCAACTTTACT------------------GCAGCCCCAGTTTACCCACACTACGTGGGTTACCCTCATATG---------............TCCAACATGGATCCT---CACGGGCCTTCGCTG------------GGAGCCTGGAGCTCACCCTACAGTCCGCCC---CGGGAAGACTGG...AGTACATAC---CCTGGGCCGCCCAGTACAATGGGCACAGTGCCCATGAATGACATGACC------TCCCCAGTT---...------TTCGGATCCCCA---GACTACAGCACTCTG---GGCCCCACCAGCGGTGCAAGCAACGGCGGTAGCTTGCCAGACgcgGCCAGCGAGTCACTGGTTTCT---------------------------CTTGACTCCGGCACCTCAGGCGCCACTTCTCCCAGCAGGAGCCGTCACAGCCCCTACGCATGGATGCGCAAAACTGTGCAGGTGACGGGGAAAACCAGG
Q91542_XENLA/16-147 ATGTAT---CCACTTTCTGTAAGATCCACCAGC------------------------------------------AATAACCACACAGCGCAGAACTACGTC------------------TCCAATCAACCTTATTTCAACTATGTGGCGTATCATCATGTTCCA------............---CCTATGGATGACCAA---GGGCAGCCTATGGAGTTTGGGGACTCAGTATGGATCACCGAGGGAGGAATGGAACTCTTA------TGG...AGCTGGACC---TTA---------------------ACACAAATATGGCACAAATCATCTGATTTATCACCTAACCAG...TTTGCTTATAATTCC---TCTGGCTATAGCTCTCCT---CATCCA------------------------------------...TCTGGGACTGGGATTTTACAC------------------------TCTGTAGATTTGACTCATGCAGCTGCCAACTCACCCAGCGCTCTTAGTCAGAATTCTTACGAATGGATGGGGAAAACTGTGCAATCGACTTCTACAGGCAAG