EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04632 - FUSC)
Fusaric acid resistance protein conserved region
(Pfam reference: accession no. PF04632)
(Interpro reference: accession no. IPR006726)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
12 sequences @ 121 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.26)
nucleotides
(available for above)
11 sequences @ 363 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 5.65)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 121 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 9.86)