EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04539 phylogeny
for restricted amino acid alignment


 
((((((((((((((((((((((O67464_AQUAE/416-498,((O32637_HELPY/524-606,O52921_CAMJE/459-541),Q9AYR7_PHYPA/414-496)),RPOD_THEMA/233-315),(RPOD_TREPA/451-533,P77820_BORAF/305-387)),(Q9JTK6_NEIMA/477-559,(O08348_XANCP/461-543,Q9KH26_COXBU/248-330))),(RPOD_RHOCA/514-596,RPOD_MYXXA/548-630)),RPOD_CLOAB/219-301),O08332_STAAU/209-291),RPOD_STRPN/209-291),HRDA_STRCO/237-319),RPOD_CHLTR/395-477),(HRDB_STRCO/352-434,O85679_MICEC/24-106)),(P77842_CHLAU/237-319,(HRDC_STRCO/180-262,(P77906_MYCTU/186-268,Q79VF3_CORGL/172-254)))),HRDD_STRCO/174-256),((((((Q9R6V8_SYNP7/163-244,(P73666_SYNY3/161-242,P96034_SYNSP/161-241)),Q9KHE8_ANASP/175-256),((Q55350_SYNSP/163-244,(P96032_SYNSP/170-251,Q55525_SYNY3/187-268)),(Q9KHE5_ANASP/170-251,(O30967_NOSPU/172-254,RPSB_ANASP/175-256)))),(Q9KHE4_ANASP/230-312,P73710_SYNY3/210-292)),(((Q9FD90_SYNEL/237-318,RPSC_ANASP/255-336),P96035_SYNSP/237-318),RPSC_SYNY3/243-324)),(P71149_CHLTE/140-221,((Q9F8R5_ECOLI/168-250,O32416_VIBCH/169-251),(Q9S4T1_LEGPN/181-263,(O33503_PSETO/175-257,Q9KI19_COXBU/191-273)))))),((Q9ZSL6_ARATH/257-339,(O22056_ARATH/410-492,(Q9ZPL2_MAIZE/376-457,Q9ZPL1_MAIZE/364-445))),(Q9LD95_ARATH/385-467,Q9ZPL0_MAIZE/379-460))),(((P77841_CHLAU/151-233,P71106_CHLAU/187-269),P77840_CHLAU/184-266),Q9ZTL1_CYACA/409-489)),((O64419_CYACA/250-332,Q39477_CYACA/411-491),Q9ZNX9_ARATH/359-440)),(O24348_SORBI/335-415,(Q9FPH1_ARATH/337-418,Q9SLX4_TOBAC/343-423))),(((RPSB_BACAN/108-189,((P95844_STAAU/109-191,O50232_BACLI/110-191),Q9KFF0_BACHD/108-189)),RPOF_STRCO/141-222),((Q9RIS8_STRCO/118-198,(Q55358_STRSE/106-185,Q9ZIV9_9ACTO/193-274)),((P96891_MYCBO/117-197,Q9RIT0_STRCO/215-294),Q9RIS5_STRCO/157-237)))),Q9KA59_BACHD/102-182),((Q9L7Q0_PROMI/90-172,FLIA_ECOLI/90-172),(Q9KQD4_VIBCH/93-174,(O52258_PSEPU/94-174,Q9L774_XANOR/94-174)))),P77959_STRRP/122-203,Q59823_STRAU/122-202);
((((((((((((((((((((((O67464_AQUAE/416-498:0.28885,((O32637_HELPY/524-606:0.10637,O52921_CAMJE/459-541:0.21168):0.28312,Q9AYR7_PHYPA/414-496:0.59362):0.11268):0.08378,RPOD_THEMA/233-315:0.56106):0.02392,(RPOD_TREPA/451-533:0.20228,P77820_BORAF/305-387:0.34997):0.23578):0.08405,(Q9JTK6_NEIMA/477-559:0.22108,(O08348_XANCP/461-543:0.08956,Q9KH26_COXBU/248-330:0.17256):0.03309):0.08397):0.04193,(RPOD_RHOCA/514-596:0.17798,RPOD_MYXXA/548-630:0.10131):0.05564):0.11572,RPOD_CLOAB/219-301:0.09286):0.05788,O08332_STAAU/209-291:0.12938):0.03570,RPOD_STRPN/209-291:0.16971):0.03168,HRDA_STRCO/237-319:0.50926):0.05725,RPOD_CHLTR/395-477:0.53869):0.08208,(HRDB_STRCO/352-434:0.11556,O85679_MICEC/24-106:0.16516):0.13777):0.08817,(P77842_CHLAU/237-319:0.54839,(HRDC_STRCO/180-262:0.58198,(P77906_MYCTU/186-268:0.10969,Q79VF3_CORGL/172-254:0.15786):0.27932):0.15171):0.15495):0.09209,HRDD_STRCO/174-256:0.51800):0.05629,((((((Q9R6V8_SYNP7/163-244:0.24916,(P73666_SYNY3/161-242:0.03915,P96034_SYNSP/161-241:0.22459):0.09281):0.04687,Q9KHE8_ANASP/175-256:0.15421):0.09773,((Q55350_SYNSP/163-244:0.23494,(P96032_SYNSP/170-251:0.20708,Q55525_SYNY3/187-268:0.15885):0.00516):0.05727,(Q9KHE5_ANASP/170-251:0.11496,(O30967_NOSPU/172-254:0.39581,RPSB_ANASP/175-256:0.28919):0.11973):0.06178):0.10248):0.08722,(Q9KHE4_ANASP/230-312:0.19787,P73710_SYNY3/210-292:0.18117):0.36512):0.08722,(((Q9FD90_SYNEL/237-318:0.18868,RPSC_ANASP/255-336:0.11185):0.09901,P96035_SYNSP/237-318:0.15881):0.03510,RPSC_SYNY3/243-324:0.20459):0.25581):0.15400,(P71149_CHLTE/140-221:0.82192,((Q9F8R5_ECOLI/168-250:0.16533,O32416_VIBCH/169-251:0.18717):0.08589,(Q9S4T1_LEGPN/181-263:0.24161,(O33503_PSETO/175-257:0.21685,Q9KI19_COXBU/191-273:0.48873):0.03049):0.14681):0.59364):0.25360):0.13584):0.06157,((Q9ZSL6_ARATH/257-339:0.73386,(O22056_ARATH/410-492:0.44596,(Q9ZPL2_MAIZE/376-457:0.02772,Q9ZPL1_MAIZE/364-445:0.33172):0.34735):0.27757):0.12140,(Q9LD95_ARATH/385-467:0.29168,Q9ZPL0_MAIZE/379-460:0.52983):0.88058):0.43384):0.20620,(((P77841_CHLAU/151-233:1.15071,P71106_CHLAU/187-269:0.45354):0.23221,P77840_CHLAU/184-266:0.39170):0.28215,Q9ZTL1_CYACA/409-489:0.94835):0.00000):0.53254,((O64419_CYACA/250-332:1.03508,Q39477_CYACA/411-491:0.59045):0.36911,Q9ZNX9_ARATH/359-440:0.95323):0.38609):0.01921,(O24348_SORBI/335-415:0.00000,(Q9FPH1_ARATH/337-418:0.22346,Q9SLX4_TOBAC/343-423:0.11150):0.32315):1.07003):0.29112,(((RPSB_BACAN/108-189:0.46021,((P95844_STAAU/109-191:0.30204,O50232_BACLI/110-191:0.17884):0.06831,Q9KFF0_BACHD/108-189:0.10330):0.36498):0.24508,RPOF_STRCO/141-222:0.77449):0.15146,((Q9RIS8_STRCO/118-198:0.47155,(Q55358_STRSE/106-185:0.50844,Q9ZIV9_9ACTO/193-274:0.23655):0.34005):0.11718,((P96891_MYCBO/117-197:0.59134,Q9RIT0_STRCO/215-294:0.24711):0.11651,Q9RIS5_STRCO/157-237:0.38880):0.17845):0.17548):0.13772):0.34880,Q9KA59_BACHD/102-182:0.61074):0.33514,((Q9L7Q0_PROMI/90-172:0.29236,FLIA_ECOLI/90-172:0.18231):0.40429,(Q9KQD4_VIBCH/93-174:0.87087,(O52258_PSEPU/94-174:0.51663,Q9L774_XANOR/94-174:0.90864):0.30655):0.12674):0.48025):0.70342,P77959_STRRP/122-203:0.12960,Q59823_STRAU/122-202:0.19249);