EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04493 alignment
(12 sequences with 744 bp)


NFI_THEAC/123-318 AAGATGCAGCAATATCAGGAATACATAGCTCGAAAGTACAGCGAATCTGGAGCCGGTGAATTC---...AGAACCGTGGCAGCCTTCGATGTCTCATAC------------GAGGAAAGGAGGGCATTTGCCTCGATGGTGATACAG---------GACGGGTCCACGATAGAGGCCTACGTGATC---AGTGACGGAATTAACTTTCCTTACATACCTGGGTATCTGGCCTTCAGGGAGTTCAGG------------TTTATAAAGAAGCTTTACAGGAAGGCTGAT....................................---------...------...---------CTGCTGCTGATAGACGGCAACGGCATTCTGCATCCGCGTTTTGCAGGTCTGGCCACCCATGCCGGCGTACTGCTGGACCGCGCATCGATAGGTGTTGCCAAGCATCTGACGAGATCCACC...AGGCATCAGGACATAATATACATGCAGGATCGG------------------------CCTGTAGGCGTCATGATCAGGAAG---...---------AACATGATCGTCAGTCCGGGGAATTTCATC---GACGTCAACGGATCAGCGGATACGGTCAGGAAAATGTGGAATGAT---CGCTACCCATGGCCACTGAAACTGGCGCATCAGCTTAGCACGCGGCATGCGGAAACAGGAGGTCGCGTATCCGAGTACAGCATCGAATCA
NFI_THEVO/118-313 AAGCTAAGGGAACTTCAATTTAAAATTGGCCGATTGTACGATGATAGAAACGACTACTCTCTC---...GATACAATAGCAGCGTTCGATGTTTCATAC------------AAAGAAACCCGCGGCTATGCATCCAAGGTAGTTTAT---------AATAAAGGTAAGATAGGGGCATACGTATAC---AGTTCGGATTCCATGTTCCCTTATATCCCAGGATACTTAGCTTTTAAGGAATTTAAG------------TTTATTAGGGCCCTCTATGACAATGAAACT....................................---------...------...---------ATGATACTCATAGATGGTAACGGCATATTGCATCCAAGGTTCGCCGGTCTTGCTACGCATGCTGGTGTCAGTCTCAAAACGGCTTCAATTGGAATTGCAAAACACCTAATCAACTGTACA...GTAAAGGGATCGGATCTGTTAATTTCCGGAGTG------------------------GTTGCTGGAAAGATGATCGGGCAT---...---------CACACGATCGTCAGTCCAGGGAACAGGATC---AATGTTGAGGAGGCTGGAAGACTTATTGAGCAAAGGGAGGGAAAG---GAGATGAGGAGCCTTTTAAGACTTGCGCACAACCTTACTAGACTTCACATTGAAACGAATGGAAATATAGCAAGATACGATTTTTCAACT
NFI_PYRAB/4-194 AAGATAGCTGAAGTTCAGAAAAAACTCAGTAAAAGGATAGTAGAAAAAGAAGTAAGAATGGTT---...AGCAAAATAGCGGCCGTCGATGTTTCGTAC------------AAAGGAAACAAAGCTAGGGTAGCCCTGGTGATATGTTCCTTTCCAGATTGTAAAGTTTTAAAGACTAAAGTCCTT---GAAACCGAGGTTTCGTTCCCTTACATCCCAACTTTCTTCTTCCTCCGCGAAACTAGGCCGATA------CTCCTAGTTACCAAAGGAGAAGAGTTTGAC....................................---------...------...---------GTTTTGATAGTGGAAGGCCACGGAAAAGCCCATCCGAGGAAGTATGGATTGGCTTCTCATATAGGGCTTATCCTGGGAAAGCCCACGATTGGCGTTGCGAAGAAATTGCTAAGGGGCACT...CCAGAGAATAGTTACCGGAAAGTTGGA---------------------------------------------------------...---------AAGGCCTACGTAAGCGTTGGAAACATGATA---ACTTTGAAAGATGCTGTAAGGATAATCGAGAAACTCCTCGACGGG---GGCTATCCAAAACCGTTAAAACTTGCTGACAAACTATCAAAGGGGAAGATAAGTGAAGATGAAAACACTCTTCCTTCTGATAAAACTAGC
NFI_PYRHO/4-195 AGGATAGCAAATATTCAGAAAAAACTGAGTAAAAGTATAGTCGAAAGGAAGATAAATGAGGTT---...AGAAAAGTTGCAGCAGTGGACGTTTCATAC------------AAGGAAGAAAAGGCAAGAGCAGCATTAGTTATAACGACGTTTCCAGAGGGAGAAGTCCTGAAAACTAAAGTTATT---GAAACAACGGTATCTTTTCCATATATCCCCACCTTCTTCTTTCTAAGGGAGACCAAACCTATA------CTTATAGCAACAAAAGGAGAGACATTCGAT....................................---------...------...---------GTTCTTATAGTTGAGGGGCACGGAAAAGCCCATCCAAGAGGGTATGGATTAGCCTCACATATTGGAGTTGTTCTTAGGAAACCTACTATAGGAGTGGCAAAGAGATTACTAAAAAACACA...CCAAAGGATACCTATAAGAAAGTTGGA---------------------------------------------------------...---------AAAGTCTATGTAAGTGTTGGAAATCTTATA---ACGCTTGAAGATGCCACCAAAATAATAAGAGCGATACTCGACGAAAGTGGGTATCCAAAACCATTAAAATTGGCCGATAAACTATCAAAGGGGAGGATTTATGAAGTTAAAAACACTCCTTCTCCTAATAGATCTAGG
YDA6_SCHPO/16-239 CAGCAAATTGAACTTAAAGGGATGTTGCAGCTAATTCCCAAATTTCAAAGTTTGAATGAAATA---...AGATATGTTGTAGGATTGGATATCTCTTTTGATAAA------TCAAGTCCAAAGGCTGTCTCAGCCCTTGTTATTTATGATTTAGAACAACGTATGATTATTTATAAAGATTATTTGTGCATTGAGAAATTAGAAGAGGACTATGTTCCCGGGTTTCTTTCATTTCGAGAAATTAAATGGTATTTGCCATTGCTAAATCACATTCCTCATCAATTTCGA....................................---------...------...---ATTGATATCATTTTAGTAGATGGAAATGGCGTATTGCATCCTGTCGGATTTGGATTGGCTTGCCATTTAGGTGTGTTGTTGAATCTTCCCGTTGTTGGCGTCGCGAAAAATTACTTACATTGCGTGggtTTGACTGAAAGCTTAGATGCACATCGTGAAACTTTAAAGAAACACGTGCTAAAGAAAACAACTGATCATCCAATATTGATTCACtcgATTGATCAATCTTCTGAGATTCTGGGCGCTGCAGTATGGACAAGCAGTAACTCGAAACGCCCAGTTTATGTTAGCATCGGTAACCAAATGAATTTAGAACAGTCTATCCAACTCGTACAGAAATGCAGTAGCTCTCATAGCAGGGTACCGGAACCGATCAGGCAAGCAGACATTTATGCC
Q9M087_ARATH/33-269 GCGTACGATGACTTCACATGGAAGTTATCTTCATCAACGGAACTGTCTCAGGGATCGGAGATACTT...AAGTATGTTGGAGGTGTAGACATGAGCTTTTGCAAAGAA---GATTCTTCCGTCGCATGCGCTTGTCTCGTCGTTCTTGAGCTTCCTTCTCTCCGTGTAGTCCACCATGACTTCTCT---CTTCTCCGCCTCCATGTTCCTTATGTCCCTGGATTTCTTGCCTTTCGTGAGGCTCCGGTTCTTTTGCAGATTCTGCAGAAGATGAGAGATGAGAAGCATccattctatcctcaggtttcagttttatctataagtTGCTTTATCtctTGCTTTgctCTTGCAAAGGTACTGATGGTGGATGGAAATGGAATACTTCATCCACGAGGATTTGGCTTGGCGTGTCATTTAGGTGTTCTTGCTCACCTACCAACCATTGGGGTCGGAAAGAATCTGCATCATGTGGAT...GGTCTGAATCAATCTGAGGTTAAACAGTCGCTTCAGCTCCAAATAAACGAGCATGAGCAAACTATCACTTTGGTAGGAAAC---...---------TCTGGAATTACATGGGGAGTAGGATTTAGGCCAACTCTGAGTTCTCTAAAGCCCATATATGTATCGGTTGGCCATCGCATATCACTGGACTCTGCCGTTGAAGTTGTCAAGATAACCTGCAAGTAC------CGTGTTCCAGAACCTATTAGACAGGCAGATATTAGATCA
NFI_SULSO/9-192 TTCTTAGAGAAATTACAATTCCTTATCTCAAAAAACGTTAAAATAAGTCATTACGGAATTGAGAACgttAAGAAAATCTGTGGGGTTGATATTGCATAT------------AAGGGTAATCTAGGATTCTCAGTAGGTGTAAGTATGGATATTAATAGTGGAGATTATAATTACAAATCTTATGTT------GGTGAAGTGAATTTCCCATATATTCCAGGTTTCCTTTTCATGAGGGAAGCTCCATTAATGATAAAAGCAATAGAGGGTTTGGATTGTCACCTTCTT....................................---------...------...---------------TTGGTTGATGGTCATGGGATAGCTCATCCTAGGAAAAGCGGAATTGCTGCAGTTATAGGCGTTCTCCTAGACTTCCCAACAATTGGGGTAGCGAAATCTAGGCTTACGGGT---...------GATTTGGTTAATGAAAGTGAA------------------------------------ATTACCTATGTATATCTA---...---------AATGGAGAGAAAGTAGGGGTTAAATTCGGT------------------AGA---TATTTTTATAGTCCAGGAAATAAAGTCGACTTACAAGATTGCATTGAACTAGGTAAGAGGGGTTATCCTAAA------GTTCTA------------AAAATAGCTGATATGCTCACT
NFI_CLOAB/20-226 ATTCAAAGCAGTTTAGTGAAGAGAATTAAATTAATAAGTGATTTTAAAGAAGAG---GATATA---...AAACTTTGTGCAGGTGTGGATTTAGCATATTGGACAAAAGGTGAGAAACAGTATGGTGTATGCTGCATCATTGTGATCGATTATAATACAGGTGAGATAATAGAAAAGGCCTATGAT---TATGGGGAGATAGAAGTGCCATATATGCCGGGATTTTTAGCCTTTAGGGAGCTTCCACTAGTTATCAAAACCGTTAAAAAGCTAAAGAATGAGCCAGAT....................................---------...------...---------ATATTTATGTTTGATGGAAATGGATACTTACATTATAATCATATGGGAATAGCTACACACGCATCATTTTTCTTAAATAAACCTACAATAGGAGTTGCTAAAAGTTATTTAAAAGTAGCA...GGAGTAGACTTCGAAATGCCTGAAAGTTTTGAG------------------------GGTGCCTTTAAAGATATTGTAATA---...---------AATGAAGAGGTATATGGAAGAGTATTAAGA---ACTAAAAAAGATGTTAAGCCTATATTTGTATCCTGCGGAAATTACATAGACTTAGAAACATGCACGAAAATATGCAGTAAGCTTATAAATAATGATAGTAGATTGCCAATTACAGTTAGATTAGCGGATTTAGAAACG
NFI_BACSU/20-226 GTGCAATTTAACCTTAAAAATCGTATCAACCTATCCCCCACGATCCATCCAGAC---TCCATC---...AACACCGGCGCAGGCGTCGACCTGGCCTATTGGGAGCAGGATGGAGAACCATACGGAGTGTGCTGTATTATCGTAATTGACGCTGATACAAAAGAAGTCATTGAAAAAGTGCACAGC---ATGGGGAGAATCAGCGTGCCGTATGTTTCCGGTTTTCTTGCGTTTCGCGAGCTGCCCTTGATCATCGAGGCGGCGAAAAAGCTGGAGACGGAGCCGGAT....................................---------...------...---------GTCTTCTTGTTTGATGGCAACGGATATCTGCATTACAATCATATGGGCGTTGCCACCCATGCGGCTTTTTTTCTGGGCAAGCCGACGATTGGGATAGCGAAAACCTATCTCAAAATCAAA...GGCTGCGATTTCGTGACGCCTGAAATTGAAGTA------------------------GGCGCATACACCGATATTATCATT---...---------GACGGCGAGGTATATGGACGGGCGCTGCGA---ACGCGGCGGGACGTGAAGCCTATTTTCTTGTCTTGCGGTAATTATATTGATTTAGACAGCAGCTATCAGATCACGATGAGCTTGATCAATCAAGAAAGCAGGCTGCCGATCCCTGTCCGCCTGGCTGACCTTGAGACG
NFI_STRCO/22-222 GTCCAGGACGAACTGCGCGCCCGCGTGGTGCTCGACGAGCCCGGCCCGCCCCCCGGCACCGGC---...---CGGGTGACCGGCGTGGACGTCGCCTACGACGAC------GAACGCGACGTCGTCGCGGCGGCGGCCGTCGTACTGGACGCCGGGACCCTCGCCGTGGTCGCCGAGGCCACGGCC---GTCGGCCGGATCTCCTTCCCGTACGTGCCCGGCCTGCTCGCCTTCCGGGAGATCCCGACCGTGCTCGCCGCACTGGAAGCGCTGCCCTGCCCGCCCGGC....................................---------...------...---------CTGGTCGTGTGCGACGGGTACGGCCTGGCCCACCCGCGCCGCTTCGGCCTCGCCAGCCACCTGGGCGTCCTCACCGGCCTGCCCACGATCGGCGTGGCCAAGAACCCGTTCACCTTC---...------ACCCACGACGACCCCGACACCCCGCGC------------------------GGCAGCACGTCCCCGCTGCTCGCC---...---------GGTGCCGAGGAGGTCGGGCGGGCGGTGCGC---ACCCGCGACGGCGTGAAGCCGGTCTTCGTCTCGGTCGGGCACCGGGTGGGCCTCGGCAACGCCTGCGCCCACACCCTGGCCCTGACGCCCGCC---TACCGGCTGCCGGAGACCACCCGCAGGGCCGACGCCCTGTGC
NFI_THEMA/19-217 GTGCAGAACGAACTCAGAAAGAAGATAAAACTCACTCCATACGAAGGAGAGCCC------------...GAGTACGTGGCGGGAGTGGACCTTTCGTTTCCG---------GGAAAAGAAGAAGGGCTCGCGGTGATAGTGGTACTCGAATATCCTTCTTTCAAAATATTAGAGGTCGTTTCTGAA---AGGGGAGAGATAACTTTTCCCTACATTCCGGGGCTCCTTGCTTTCAGAGAAGGACCTCTGTTCTTGAAGGCCTGGGAAAAGCTGAGAACGAAACCCGAT....................................---------...------...---------GTTGTGGTCTTCGATGGTCAGGGACTGGCACATCCCAGAAAACTTGGGATAGCCTCCCACATGGGACTCTTCATAGAGATCCCGACCATTGGTGTGGCAAAATCCAGACTGTATGGA---...------ACGTTCAAAATGCCTGAAGATAAAAGG------------------------TGTTCCTGGAGTTATCTCTACGAC---...---------GGCGAGGAGATAATAGGCTGTGTGATCAGA---ACAAAGGAAGGAAGTGCTCCTATCTTCGTGTCTCCGGGCCATCTCATGGACGTTGAAAGTTCGAAAAGACTGATCAAGGCTTTTACCTTACCCGGAAGAAGGATACCGGAACCCACCAGACTGGCACACATCTACACA
NFI_ARCFU/12-207 ATACAGGAGGAGATGTCCAGAAGTGTGGTTCTCGAAGACTTAATCCCTCTTGAA---GAGCTT---...GAGTACGTTGTGGGTGTTGATCAGGCCTTT------------ATCAGCGATGAGGTTGTCTCATGTGCGGTCAAGCTGACCTTTCCGGAACTGGAGGTTGTTGATAAAGCTGTGAGG---GTTGAGAAGGTCACTTTCCCCTACATCCCCACCTTTCTCATGTTCAGGGAGGGAGAGCCTGCAGTTAATGCGGTCAAAGGGCTTGTGGATGACAGAGCG....................................---------...------...---------GCAATCATGGTTGATGGGAGCGGAATTGCCCATCCGAGAAGGTGCGGGCTTGCAACATACATCGCCCTAAAGCTGAGAAAGCCGACTGTGGGGATAACAAAGAAAAGGCTTTTTGGT---...------GAGATGGTAGAGGTGGAAGATGGG---------------------------------CTTTGGAGGCTTTTAGAT---...---------GGAAGTGAAACCATAGGCTACGCCCTTAAA---AGCTGCAGGAGGTGCAAACCAATCTTCATCTCACCGGGGAGTTACATATCTCCTGACTCAGCCTTGGAGCTGACGAGAAAGTGCCTTAAAGGC---TACAAGCTTCCTGAGCCGATAAGAATCGCCGACAAACTTACC