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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04389 phylogeny
for restricted amino acid alignment


 
(((((((((Q9YDB0_AERPE/249-412,((((YFI8_YEAST/119-344,(Q7S0R5_NEUCR/126-350,Q7SGU5_NEUCR/144-382)),((((Q7Q569_ANOGA/73-280,Q9VRQ9_DROME/107-312),Q9VTH7_DROME/129-318),((Q86PD7_DROME/130-333,Q7Q1Q7_ANOGA/145-349),(Q9YIB5_BOTJA/137-351,Q9D8Y3_MOUSE/162-366))),O17912_CAEEL/115-323)),((Q7MT37_PORGI/117-314,Q8A4P9_BACTN/117-317),Q7UHT1_RHOBA/176-373)),(O67732_AQUAE/190-352,((Q9HNP7_HALN1/224-389,Q9HRR8_HALN1/220-384),(IAP_ECOLI/110-321,Q9F3Y1_PSEAE/119-319))))),(((Q8XIF2_CLOPE/231-402,(Q97F97_CLOAB/227-398,Q898V9_CLOTE/225-396)),(Q82VZ8_NITEU/829-1008,((Q7UQS9_RHOBA/733-948,Q8A5P9_BACTN/139-321),(((Q9A4J1_CAUCR/335-529,(Q9A578_CAUCR/260-453,Q7ND13_GLOVI/309-501)),(((Q8EDI3_SHEON/278-480,Q8PEF6_XANCP/333-532),(Q8P3Z6_XANCP/298-496,((Q8PPS0_XANAC/311-509,Q87AH5_XYLFT/290-488),Q9A3U5_CAUCR/192-390))),Q8EF07_SHEON/278-467)),Q7UGZ5_RHOBA/480-666)))),(((Q8GGR6_STRAZ/146-311,Q7MAY9_PHOLL/149-318),Q9A369_CAUCR/119-286),((YC6C_SCHPO/140-307,Q9C2E0_NEUCR/178-345),(O64804_ARATH/146-318,((Q7X7Q3_ORYSA/128-297,Q9SXH2_IPOBA/146-316),(O94702_SCHPO/154-322,((Q7PQQ4_ANOGA/113-284,((Q7PT40_ANOGA/96-268,Q7QJV5_ANOGA/77-248),((((Q86BD1_DROME/24-195,Q9V6A2_DROME/163-334),(Q9V8U1_DROME/165-336,Q9V8U0_DROME/165-336)),(Q8SX46_DROME/72-243,(Q9V8T9_DROME/151-321,Q8IH56_DROME/157-328))),Q8MT48_DROME/150-321))),Q8BIM4_MOUSE/192-363)))))))),(Q7PX79_ANOGA/222-389,Q7PX80_ANOGA/301-469)),Q93EJ5_BACLI/248-421),Q8TL26_METAC/121-299),((Q7RZ44_NEUCR/250-445,APE3_YEAST/307-487),((((Q9FBN5_STRCO/130-314,Q8CK35_STRCO/710-894),Q82DU6_STRAW/116-300),(Q7U215_MYCBO/264-463,Q53737_9ACTO/260-459)),Q9HZQ8_PSEAE/289-482))),Q7RW54_NEUCR/218-393),O82996_AERPU/193-374),AMPX_VIBPR/196-377,Q9KLD3_VIBCH/193-374);
(((((((((Q9YDB0_AERPE/249-412:1.61052,((((YFI8_YEAST/119-344:0.67250,(Q7S0R5_NEUCR/126-350:0.24228,Q7SGU5_NEUCR/144-382:0.34243):0.17302):0.19682,((((Q7Q569_ANOGA/73-280:0.32188,Q9VRQ9_DROME/107-312:0.35329):0.11525,Q9VTH7_DROME/129-318:0.65632):0.06843,((Q86PD7_DROME/130-333:0.31525,Q7Q1Q7_ANOGA/145-349:0.34917):0.15988,(Q9YIB5_BOTJA/137-351:0.24781,Q9D8Y3_MOUSE/162-366:0.30934):0.12639):0.10345):0.05309,O17912_CAEEL/115-323:0.44700):0.10803):0.75354,((Q7MT37_PORGI/117-314:0.51232,Q8A4P9_BACTN/117-317:0.30806):0.23830,Q7UHT1_RHOBA/176-373:0.85922):0.70099):0.15781,(O67732_AQUAE/190-352:0.97140,((Q9HNP7_HALN1/224-389:0.52413,Q9HRR8_HALN1/220-384:0.42332):0.52154,(IAP_ECOLI/110-321:0.81459,Q9F3Y1_PSEAE/119-319:0.73596):0.50061):0.18580):0.09167):0.04254):0.21218,(((Q8XIF2_CLOPE/231-402:0.32913,(Q97F97_CLOAB/227-398:0.32033,Q898V9_CLOTE/225-396:0.29970):0.16583):0.55023,(Q82VZ8_NITEU/829-1008:0.54491,((Q7UQS9_RHOBA/733-948:0.80954,Q8A5P9_BACTN/139-321:0.53530):0.17063,(((Q9A4J1_CAUCR/335-529:0.43789,(Q9A578_CAUCR/260-453:0.34893,Q7ND13_GLOVI/309-501:0.28242):0.22101):0.34200,(((Q8EDI3_SHEON/278-480:0.46399,Q8PEF6_XANCP/333-532:0.34263):0.12832,(Q8P3Z6_XANCP/298-496:0.39220,((Q8PPS0_XANAC/311-509:0.19203,Q87AH5_XYLFT/290-488:0.06877):0.17956,Q9A3U5_CAUCR/192-390:0.27949):0.06691):0.11543):0.08783,Q8EF07_SHEON/278-467:0.65446):0.12467):0.29194,Q7UGZ5_RHOBA/480-666:0.57944):0.20295):0.08111):0.33587):0.12750,(((Q8GGR6_STRAZ/146-311:0.31881,Q7MAY9_PHOLL/149-318:0.65618):0.11929,Q9A369_CAUCR/119-286:0.44355):0.15430,((YC6C_SCHPO/140-307:0.44248,Q9C2E0_NEUCR/178-345:0.50133):0.31211,(O64804_ARATH/146-318:0.58650,((Q7X7Q3_ORYSA/128-297:0.25293,Q9SXH2_IPOBA/146-316:0.14335):0.46764,(O94702_SCHPO/154-322:0.61343,((Q7PQQ4_ANOGA/113-284:0.22344,((Q7PT40_ANOGA/96-268:0.32697,Q7QJV5_ANOGA/77-248:0.22265):0.28059,((((Q86BD1_DROME/24-195:0.18034,Q9V6A2_DROME/163-334:0.21566):0.03955,(Q9V8U1_DROME/165-336:0.20095,Q9V8U0_DROME/165-336:0.19304):0.20090):0.06944,(Q8SX46_DROME/72-243:0.30042,(Q9V8T9_DROME/151-321:0.08178,Q8IH56_DROME/157-328:0.20859):0.05500):0.01784):0.07659,Q8MT48_DROME/150-321:0.19971):0.07028):0.18422):0.12413,Q8BIM4_MOUSE/192-363:0.20368):0.07908):0.06243):0.10153):0.16840):0.21762):0.50190):0.05686):0.00708,(Q7PX79_ANOGA/222-389:0.14250,Q7PX80_ANOGA/301-469:0.32624):1.53347):0.09720,Q93EJ5_BACLI/248-421:0.72240):0.15775,Q8TL26_METAC/121-299:0.59084):0.12682,((Q7RZ44_NEUCR/250-445:0.23246,APE3_YEAST/307-487:0.53377):0.15525,((((Q9FBN5_STRCO/130-314:0.14220,Q8CK35_STRCO/710-894:0.14589):0.36138,Q82DU6_STRAW/116-300:0.23248):0.14813,(Q7U215_MYCBO/264-463:0.37680,Q53737_9ACTO/260-459:0.57251):0.09709):0.07725,Q9HZQ8_PSEAE/289-482:0.26598):0.09976):0.66009):0.30156,Q7RW54_NEUCR/218-393:0.78218):0.40255,O82996_AERPU/193-374:0.22242):0.17762,AMPX_VIBPR/196-377:0.08132,Q9KLD3_VIBCH/193-374:0.16664);