EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04386 alignment
(8 sequences with 489 bp)


SSPB_HAEIN/5-150 TCTTCTCCTAAACGCCCTTATTTATTACGCGCCTATTATGATTGGCTAGTAGATAATAGTTTTACGCCTTATTTAGTTGTTGATGCGACTTACTTAGGTGTGAATGTTCCTGTCGAATATGTAAAA---GATGGACAGATTGTATTAAACTTGTCTGCCAGTGCTACGGGCAATTTACAACTTACAAATGATTTCATCCAGTTTAATGCGCGTTTTAAAGGCGTCTCTCGTGAACTGTATATTCCAATGGGCGCAGCCCTTGCGATCTATGCTCGTGAGAATGGCGATGGCGTGATGTTTGAACCTGAGGAAATTTATGAT------------------GAACTTAACATTGAGCCAGAT---ACTGAACAACCAACAGGTTTTTATGAAGCAGTAGATAAGCCTAAAAAACGAGAAGAAAAAAAGAAA------------------------...ACAAAATCAGTTTCCCATTTAAGAATTGTGGAT
Q9CNA9_PASMU/5-160 TCATCACCAAAGCGTCCTTACTTGTTAAGAGCGTATTATGATTGGTTAGTGGATAATGATTTCACCCCTTATTTAGTGGTGGACGCGACTTATGTTGGTGTGAAAGTCCCTGTGGAATATGTCAAA---GATGGGCAAATTGTCCTCAATTTATCTGCGAATGCGACAGGTAATCTGGTACTAAGCAATGAAAGTATTCAGTTTAGCGCGCGTTTTCGTGGTATTTCACAAGATATTTTTATTCCTATGGGGGCTGCGTTAGCCATTTATGCCCGTGAAAATGGTGATGGTGTACTGTTTGAACCTGAAGCGATTTATGAT------------------GAGCTCGCAACACAAGATATTGGTGTTGAGCAGCCACTGAGCTTTGTTGAGGCTGTCGATAAACCAAAAACCAGTGAGAATACTCAAAAAAGCACAAACAAAGACAAAACGACGgaaAAAAAAGCGACTTCTCATTTAAGAATTATTAAA
SSPB_ECOLI/6-165 CTAACACCACGTCGTCCCTATCTGCTGCGTGCATTCTATGAGTGGTTGCTGGATAACCAGCTCACGCCGCACCTGGTGGTGGATGTGACGCTCCCTGGCGTGCAGGTTCCTATGGAATATGCGCGT---GACGGGCAAATCGTACTCAACATTGCGCCGCGTGCTGTCGGCAATCTGGAACTGGCGAATGATGAGGTGCGCTTTAACGCGCGCTTTGGTGGCATTCCGCGTCAGGTTTCTGTGCCGCTGGCTGCCGTGCTGGCTATCTACGCCCGTGAAAATGGCGCAGGCACGATGTTTGAGCCTGAAGCTGCCTACGATGAAGATACCAGCATCATGAAT---GATGAAGAGGCATCGGCAGACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCA...CGCGGTGGTCGACCGGCATTACGCGTTGTGAAG
Q9KUE4_VIBCH/10-158 ATGACACCACGCCGACCATATTTGCTACGTGCATTTTATGATTGGTTACTGGAAAATGAATTAACGCCGCACCTCGTCGTTGATGCCACTTTACCGGGCGTGAAGGTACCACTTGAATACGTTCAA---GATGGTCAAATTATTCTGAATGTTGCTCCACGAGCAGTGGGAAACCTAGAGTTGGGCAATGATGAAGTGACCTTTAATGCCCGTTTCGGTGGTCGTCCTCATTTGGTTATCGTGCCTATTTATGCTGTGCAGGCCATTTATGCCCGTGAAAATGGCGCAGGCACTATGTTTGAGCCGGAGCCTGCTTAT---------CTAGATATGATGGATTTTCCTGAAGAGATTGATTCAGAT---GACTCCTTGATTGAGCTGGAAAGCGATGTTGCGGTTGAGCACACTGAAGAGACT------------------CCACGCCCT---...AGAGGC---AAACCGAGTTTACGTGTCGTGAAG
Q9PEW6_XYLFA/9-146 ATGACCAGTCATCGGCCCTATCTGTTACGAGCCTTGGTCGAATGGATTAACGACAATGGGATGACTCCCCATATTTTGGTGGATGCGGGCATTCAGGGTGTGCAGGTTCCGGAAAGTGCGGTCAAG---GATGGTCGGGTCGTATTGAATATTGCTGGGCGTGCGGTGATGCATTTGCATATTGGCAATGACGGCGTCAGCTTTAATGCGCGTTTCGGTGGAGTCAGCTATCCGGTGCAGGTGCCAATGCAAGCGGTATTAGCAGTGTACGCACGTGAAACAGGGCAGGGTATGGCGTTACCAGACGATATCCAGGGTGAG------------------------CCGCCGGAAGATGTGCCGCCA---------------------CCGCCTGAGACGCCGAGTGGCGGCAAAGATACGTCC------------------CCTGTTTCT---...---GGGAAGCGATCGCACTTGCGCGTAGTGAAG
Q9HVY8_PSEAE/1-135 ATGAATTCCAGCCGTCCCTATCTGGTCCGCGCGCTCTATGAATGGATCGTCGACAACGATTGCACGCCACATATCCTGGTGAACGCAGAGTTCGCCGGGGTAAAGGTGCCTCCGGGTTATGCCAGC---GATGGGCAGATCGTGCTCAATGTCTCGCCCTCTGCCGTGCGGCATCTGCACATGGACAACGAGGCGGTCAGCTTCGAGGGGCGTTTCGGCGGCGTGGCGCAGAGCCTGTACATTCCAGCGCTGGCGGTAATGGCCATCTACGCCCGGGAAAACGGACAGGGCATGGTCTTCGATCTGGAGCAGCCGGGT---------------------------CCGGTGGACGACGAGCCG---------------------------GGCGATGACGATGGCGGACCGTCCGATGAGCCG------------------CCGCGTCCC---...---AGTGGCAGGCCATCCCTGAAGGTGGTCAAG
Q9JW84_NEIMA/2-130 CCCACCTCAACCAAACCCTACATCCTCCGCGCACTTTGCGAATGGTGCAGCGACAACAGCCTCACACCGCACATCCTTGTCTGGGTCAAC---GAACACACGCGCGTCCCCATGCAGTACGTCCGC---GACAACGAAATTATGCTCAACATCGGCGCGACCGCCACGCAAAACCTTCAAATCGACAACGATTGGATCAGCTTTTCCGCCCGCTTCGGCGGACAGGCGCACGACATATGGATACCTGTCGGACACGTCCTCAGCCTTTTCGCACGGGAGACCGGCGAAGGTATGGGGTTTGAATTGGAAGCGTATCGC---------------------------------------------CCC------------------------GACACGTCGCCTGAAAACACCTCTGCCGAAACC---------------GCGCCCCGGCCC---...------GCCAAAAAAGGCTTGAAATTGGTCAAA
O52735_FRANO/1-135 ATGGCTATGCTTAGAGCATATGTAGTTAAAGCTACATACAACTGGCTAGTTGATCATGGATTTACACCTTATGTTTTAGTTGATACTGAGTATGAAGGTGTTATAGTACCAGCAAACTATATTGATGAAGATAAAAAAATACTTTTAGATTTATCTCCTCAAGCAATACAAGATTTAGTTATAGATGATAATCATATTAGCTTTGCTGCAACGTTTGATAGTGAGCCAATGTCTATAAATATTCCTATCGAGGCTGTCTTAGAAGTATTTTCTAAAGAAACAGAGCAAGGAATGTATGCTCGCGAATTTGGTTATGGA------------------------------------------------------------------------ATTAATATCAATGAAGGCGAAGATGATGAAACTGCTAAT------------CCTAAGAAATTAggaGAAACTAATTCAGATAACGTTCTTTCATTAGAT