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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04313 phylogeny
for nucleotide alignment


 
(((((((((((((Y124_METJA/13-118,Y1214_METJA/9-201),((O27023_METTH/2-199,O28565_ARCFU/1-183),Q9V1Y1_PYRAB/70-226)),((Q9PPL7_CAMJE/56-178,(Q8YXU6_ANASP/8-116,Q8V6N5_9CAUD/21-123)),((((O51791_BORBU/28-143,(Q8Y6G9_LISMO/26-131,(Q8YST4_ANASP/21-128,(Q8TJE5_METAC/24-130,(Q8NMY6_CORGL/21-128,Q8P3G3_XANCP/21-127))))),(((Q8KRW6_BACPU/21-137,Q97DE3_CLOAB/27-138),Q9HIK3_THEAC/31-139),(((Q9RY15_DEIRA/20-121,Q8U2Z3_PYRFU/22-128),O57843_PYRHO/1-101),Q9YBP1_AERPE/33-133))),(O50667_BORBU/56-182,(Q8YL41_ANASP/80-193,(Q8YKC2_ANASP/65-179,Q8YK42_ANASP/65-178)))),(((T1RA_ECOLI/8-122,T1RE_ECOLI/8-122),(Q8YR34_ANASP/9-123,Q97S78_STRPN/10-124)),(((Q8PWC8_METMA/4-122,(T1RK_ECOLI/257-414,((Q8PSD8_METMA/3-130,(Q8TN75_METAC/203-314,Q8XU01_RALSO/20-133)),Q97RD0_STRPN/175-286))),Q8PTL0_METMA/3-123),Q9R481_9RHIZ/8-127))))),(Q98RD2_MYCPU/10-175,((Q8RN31_CAMJE/5-202,(Q8PUX4_METMA/5-213,(Q8YNG2_ANASP/3-211,(((Q8KEK4_CHLTE/3-126,Q9P9Y1_XYLFA/17-226),((Q8PTI2_METMA/22-234,Q92S35_RHIME/22-231),(O34141_KLEPN/4-238,(((Q8PUP0_METMA/4-201,(O25952_HELPY/2-196,(Q48426_KLEPN/5-203,Q8YTN1_ANASP/5-178))),(Q9HSR7_HALN1/13-222,((Q9KR78_VIBCH/127-229,(Q8PSV0_METMA/61-227,Q9I0B0_PSEAE/90-228)),Q9AAH5_CAUCR/110-216))),((Q8P6R2_XANCP/7-227,Q8RPF1_LEGPN/6-224),Q8YCS9_BRUME/6-218))))),((P95512_PASHA/3-211,T1RH_HAEIN/1-210),(Q8PZR1_METMA/1-208,Q9CKR5_PASMU/1-208)))))),T1RH_METJA/26-235))),(O25211_HELPY/2-178,Q9F6Z9_STRTR/6-221)),((O68167_9LACT/53-205,(O52272_LACLA/15-204,Q8NZF0_STRP8/5-205)),O30380_MYCPU/2-196)),Q9PR49_UREPA/29-220),Q8RJ98_CAMJE/27-219),(Q8NYL9_STAAW/3-190,(Q8PD78_XANCP/2-190,Q8YZF1_ANASP/2-112))),O25517_HELPY/6-88),Q9P9Z5_XYLFA/37-227),Q8KBB1_CHLTE/33-256),T1R1_ECOLI/30-220,T1RP_ECOLI/30-221);
(((((((((((((Y124_METJA/13-118:0.32700,Y1214_METJA/9-201:0.24304):0.13762,((O27023_METTH/2-199:0.46817,O28565_ARCFU/1-183:0.42603):0.14618,Q9V1Y1_PYRAB/70-226:0.31489):0.14897):0.16489,((Q9PPL7_CAMJE/56-178:0.49876,(Q8YXU6_ANASP/8-116:0.53169,Q8V6N5_9CAUD/21-123:0.70631):0.11732):0.16338,((((O51791_BORBU/28-143:0.42755,(Q8Y6G9_LISMO/26-131:0.24399,(Q8YST4_ANASP/21-128:0.25099,(Q8TJE5_METAC/24-130:0.24821,(Q8NMY6_CORGL/21-128:0.33757,Q8P3G3_XANCP/21-127:0.22903):0.14319):0.09129):0.08162):0.11264):0.12348,(((Q8KRW6_BACPU/21-137:0.30636,Q97DE3_CLOAB/27-138:0.32217):0.25586,Q9HIK3_THEAC/31-139:0.45019):0.19707,(((Q9RY15_DEIRA/20-121:0.75178,Q8U2Z3_PYRFU/22-128:0.38279):0.13962,O57843_PYRHO/1-101:0.30185):0.20508,Q9YBP1_AERPE/33-133:0.52795):0.09963):0.10104):0.10541,(O50667_BORBU/56-182:0.56969,(Q8YL41_ANASP/80-193:0.22696,(Q8YKC2_ANASP/65-179:0.29016,Q8YK42_ANASP/65-178:0.39062):0.10499):0.40165):0.14340):0.06459,(((T1RA_ECOLI/8-122:0.16602,T1RE_ECOLI/8-122:0.22474):0.14397,(Q8YR34_ANASP/9-123:0.33140,Q97S78_STRPN/10-124:0.36549):0.12689):0.21525,(((Q8PWC8_METMA/4-122:0.53994,(T1RK_ECOLI/257-414:0.59403,((Q8PSD8_METMA/3-130:0.42460,(Q8TN75_METAC/203-314:0.16193,Q8XU01_RALSO/20-133:0.44442):0.20579):0.08486,Q97RD0_STRPN/175-286:0.59088):0.11343):0.18236):0.06962,Q8PTL0_METMA/3-123:0.47962):0.07420,Q9R481_9RHIZ/8-127:0.66400):0.08715):0.35527):0.02416):0.15087):0.11598,(Q98RD2_MYCPU/10-175:0.50166,((Q8RN31_CAMJE/5-202:0.39568,(Q8PUX4_METMA/5-213:0.25772,(Q8YNG2_ANASP/3-211:0.30103,(((Q8KEK4_CHLTE/3-126:0.37403,Q9P9Y1_XYLFA/17-226:0.12278):0.28046,((Q8PTI2_METMA/22-234:0.48517,Q92S35_RHIME/22-231:0.39234):0.15675,(O34141_KLEPN/4-238:0.52176,(((Q8PUP0_METMA/4-201:0.27373,(O25952_HELPY/2-196:0.53110,(Q48426_KLEPN/5-203:0.23481,Q8YTN1_ANASP/5-178:0.26101):0.06911):0.09041):0.41084,(Q9HSR7_HALN1/13-222:0.40138,((Q9KR78_VIBCH/127-229:0.49913,(Q8PSV0_METMA/61-227:0.30207,Q9I0B0_PSEAE/90-228:0.20526):0.13660):0.09314,Q9AAH5_CAUCR/110-216:0.30874):0.28654):0.13911):0.02778,((Q8P6R2_XANCP/7-227:0.27332,Q8RPF1_LEGPN/6-224:0.70099):0.12840,Q8YCS9_BRUME/6-218:0.54024):0.12623):0.09723):0.07007):0.11328):0.10438,((P95512_PASHA/3-211:0.27593,T1RH_HAEIN/1-210:0.30137):0.07359,(Q8PZR1_METMA/1-208:0.31699,Q9CKR5_PASMU/1-208:0.36145):0.10564):0.15674):0.06555):0.11261):0.22195):0.10296,T1RH_METJA/26-235:0.43255):0.09680):0.04033):0.05528,(O25211_HELPY/2-178:0.40534,Q9F6Z9_STRTR/6-221:0.48385):0.39265):0.14959,((O68167_9LACT/53-205:0.54857,(O52272_LACLA/15-204:0.42408,Q8NZF0_STRP8/5-205:0.33279):0.11508):0.19485,O30380_MYCPU/2-196:0.52905):0.13789):0.10822,Q9PR49_UREPA/29-220:0.22485):0.11077,Q8RJ98_CAMJE/27-219:0.25650):0.12071,(Q8NYL9_STAAW/3-190:0.40963,(Q8PD78_XANCP/2-190:0.60785,Q8YZF1_ANASP/2-112:0.13085):0.10271):0.19622):0.09018,O25517_HELPY/6-88:0.32747):0.09319,Q9P9Z5_XYLFA/37-227:0.30984):0.24748,Q8KBB1_CHLTE/33-256:0.15663):0.06365,T1R1_ECOLI/30-220:0.17938,T1RP_ECOLI/30-221:0.10288);