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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04014 phylogeny
for amino acid alignment


 
((((((((((((((Q9AC34_CAUCR/9-58,VAGC_SALDU/7-54),((((P72576_SYNY3/15-64,Y321_HAEIN/5-56),Q9Z384_ACTAC/7-58),(Y948_HAEIN/6-56,YPFU_ECOLI/5-54)),VAPB_BACNO/7-54)),(((CHPR_ECOLI/7-60,Q9JZS7_NEIMB/5-57),PEMI_ECOLI/7-61),(Q9K6K9_BACHD/8-60,Q9RX99_DEIRA/6-58))),(((((O28916_ARCFU/9-64,(O57970_PYRHO/7-63,Q9V263_PYRAB/7-63)),(Q9YEV8_AERPE/169-224,(Q97ZI3_SULSO/16-72,Q980F5_SULSO/7-63))),((Q9HS09_HALN1/7-62,Q9UX12_SULSO/10-64),(Q97CB8_THEVO/9-64,Q9HLW4_THEAC/9-64))),(O29464_ARCFU/7-61,O29778_ARCFU/7-61)),Q97VK4_SULSO/10-65)),Q9EYZ9_PHOPR/7-61),Q97RD4_STRPN/6-57),((O85908_SPHAR/4-59,Q98F73_RHILO/2-55),Q9HHH9_HALN1/10-65)),((O07779_MYCTU/2-57,Y2626_MYCBO/2-57),(O28094_ARCFU/6-55,Q97UV7_SULSO/7-58))),(O58917_PYRHO/66-124,Q97U92_SULSO/6-60)),((Q97XQ3_SULSO/4-58,Q9V2F7_PYRAB/4-58),(O73992_PYRHO/4-58,((Q9V0L9_PYRAB/4-58,Q97UE2_SULSO/4-58),O30311_ARCFU/3-59)))),Q97EA0_CLOAB/7-63),Q97D32_CLOAB/7-64),Q97HR7_CLOAB/7-62),Q97D34_CLOAB/7-62,((ABH_BACSU/7-62,Q9K5V5_BACHD/7-62),ABRB_BACSU/9-64));
((((((((((((((Q9AC34_CAUCR/9-58:0.82880,VAGC_SALDU/7-54:0.46054):0.03646,((((P72576_SYNY3/15-64:1.77001,Y321_HAEIN/5-56:0.22747):0.12638,Q9Z384_ACTAC/7-58:0.74581):0.36091,(Y948_HAEIN/6-56:0.33015,YPFU_ECOLI/5-54:0.65714):0.91056):0.23160,VAPB_BACNO/7-54:0.99278):0.41295):0.65930,(((CHPR_ECOLI/7-60:0.30111,Q9JZS7_NEIMB/5-57:1.19877):0.36049,PEMI_ECOLI/7-61:0.77315):0.25170,(Q9K6K9_BACHD/8-60:0.63754,Q9RX99_DEIRA/6-58:0.19912):0.11339):0.22958):0.23896,(((((O28916_ARCFU/9-64:1.00892,(O57970_PYRHO/7-63:0.15053,Q9V263_PYRAB/7-63:0.18593):0.19810):0.18825,(Q9YEV8_AERPE/169-224:0.39636,(Q97ZI3_SULSO/16-72:0.70431,Q980F5_SULSO/7-63:0.44482):0.17854):0.21897):0.23709,((Q9HS09_HALN1/7-62:0.73098,Q9UX12_SULSO/10-64:0.63348):0.29208,(Q97CB8_THEVO/9-64:0.45113,Q9HLW4_THEAC/9-64:0.10244):0.51964):0.28394):0.14332,(O29464_ARCFU/7-61:0.66108,O29778_ARCFU/7-61:0.50671):0.20378):0.26753,Q97VK4_SULSO/10-65:0.82037):0.56325):0.08671,Q9EYZ9_PHOPR/7-61:0.85609):0.14482,Q97RD4_STRPN/6-57:1.48789):0.46976,((O85908_SPHAR/4-59:1.10641,Q98F73_RHILO/2-55:0.55584):0.41329,Q9HHH9_HALN1/10-65:0.62083):0.43678):0.17512,((O07779_MYCTU/2-57:0.91028,Y2626_MYCBO/2-57:0.43054):0.49023,(O28094_ARCFU/6-55:0.35010,Q97UV7_SULSO/7-58:0.38684):0.83200):0.25280):0.28876,(O58917_PYRHO/66-124:0.90051,Q97U92_SULSO/6-60:0.65415):0.16044):0.00000,((Q97XQ3_SULSO/4-58:0.50472,Q9V2F7_PYRAB/4-58:0.25102):0.16615,(O73992_PYRHO/4-58:0.23923,((Q9V0L9_PYRAB/4-58:0.25664,Q97UE2_SULSO/4-58:0.37926):0.04026,O30311_ARCFU/3-59:0.34941):0.08123):0.10228):0.49335):0.79136,Q97EA0_CLOAB/7-63:0.43521):0.19818,Q97D32_CLOAB/7-64:0.29046):0.27881,Q97HR7_CLOAB/7-62:0.10442):0.08696,Q97D34_CLOAB/7-62:0.06843,((ABH_BACSU/7-62:0.19648,Q9K5V5_BACHD/7-62:0.34027):0.15108,ABRB_BACSU/9-64:0.09968):0.34053);