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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03797 - Autotransporter)
Autotransporter beta-domain
(Pfam reference: accession no. PF03797)
(Interpro reference: accession no. IPR005546)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
219 sequences @ 399 aa
(ave. pairwise identity: 0.16)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 175.75)
nucleotides
(available for above)
209 sequences @ 1197 bp
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 103.70)
amino acids, restricted set
(corresp. to available nt seqs)
209 sequences @ 399 aa
(ave. pairwise identity: 0.16)
New Hampshire format
(total tree length: 172.03)