EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03543 alignment
(14 sequences with 804 bp)


Q8XUH6_RALSO/102-299 AGACAAGGCTTGGCTTTCCGTGCACGATTTGGGGCGGAATCCGCGCAGCACTATTCA------------------------------------------------------------------------------GGCAGCTGTGTAGGCTTGTCAGCTGTATGG------------ATTCGCCTCCACGAGGCGGCCCCGGCCACGCATGCCGTCAACCGGGTCAATACTGCCGGTTCCTTTGATGGGATGGCTCATGCTAAGGTCTATCAGCGTGCCTACGAAGCGAATCAGAGCGATATGCTGCAGGGGCGAGCTTCGAAGCGTTTTGGGAAATCA...------------------...---------------...---------GACATG------GCAAGACTTGACGCAATAGCGCAAGAGCAGCCAAGCCAGATTTTAGGCCTCACC...---------------------------------ATTGGCACCGAAGCGTATTCGCACAAAAGCGTCGGAAGCACTGCGCGTGTATTGACGGAGTTCGATGGGTATGGTTTGTTGGCTTTGCGGATGGCTGGTTCGCGGGGAGCTATTAACGGCCATGCTGCAGCACTGCATCGGCAACCAGGCAGCAGTCACATCACCTTTTTCGAGCCCAATCTCGGTGAATTCCACATTCCGTTGCACGAC------------------ACCAAGGACTTTTTGCAAGCGTATGCGGGCATGCAAAAAAGTCTTGGGCAGCCT---------GTCTCCCAATTCGATCTGCTT
Y2140_BRAJA/79-270 CCGGCCACC------------TCCTTGTTCGAATACAGAACGGCCGACCTGCGTGATGCGAAT------------------------------------------GTGGAC------------------------GGCATCTGCGTCGGGCTGACTGCGGAGTGG------------TTCCGC---AATCTTAGCAACAGCCCATCAACCCGAATGAGTGCGCTCACACCCGGATCG------CAAACGCACGCCTCAGCGGCTGAACGGCAGCAGCAATATCAACGTCTTAAGGATCAGTTGCGAAGCAGGGGAGCAGGATCTTCTCAGGCCGACCTT...------------------...---------------...---------CAGGCACAAAATACCATTTTGGAGGAAGCAGGCTTGGAACCGGCTGGAGAAGAGAAGAGATTCGCA...---------------------------------------------TTCGGCAAGTCTTCGAACGTCAAGTCCATGGTGAACGAAATCAACGAAGACGGATCGAACCATTTACTCAGCTTGTATTTC------------GCTGAAGGCGGCGCCCACACAGTGGCGACGTCGGCCTCG---AATGGAACG---ACCACGCTTTTCGACCCTAACTATGGAGAATTTACTGTTCGATCAGATCCTGACCAG------------ATGGCTTCATTGTTACAAAGCCTCGCCAATCGTTACAGGAATCCCAACGGGCAGCATTTGTCGACAATCACGACGCAAAGGATG
Y4ZC_RHISN/71-260 AGACCGAGCACC---------TCCCTGTTCCGATACAGGACGGCCGAATTGGCCCAGGCGAAC------------------------------------------GCAGAT------------------------GGAATCTGCGTCGGCTTGACTGCGGAGTGG------------CTGCGT---AACCTCAACAGTCATCCGTCAATCCGAATGGAGGCCCTAGTACCCGGATCG------CAAAGGCACGCCTCAGCCACTGTTCGGCAGAAGGAGTACGAGAATCTGAAGGTTCACCTCCGAAGACAAGGAGCAGGACCTTCTGAGGCCGACTTC...------------------...---------------...---------GCGGCGCAAAACACTATGTTGCAGAAAGCAGGCCTTGCTCCATCCGGAAAGGAGAAAGTATACAAA...------------------------------------------------GTCGGCGAGCCTAACTTCCCGCGCATGCTAACCAAGATTACAGCCGACGGATCCAACCATTTGCTCAGCTTGTATTTC------------GCTGAGGGCGGCGCACACACCGTTGCGACCTCGGCAATG---GATGGAAAC---ACCACGCTCTTCGATCCTAATTTCGGCGAATTTACTGTGCAATCAGATCAG------------------ATAGATGATTTGTTCCGAAGCCTAGCCAATCGCTACAGCAATCCAAACCGGCAGCATTTAACAACGGTGACCACCCAAAAGATG
Y2058_BRAJA/90-278 CGTCCT------------------CTGTTCGATTACAGGACGGCGGAATTGCCCCAAGCCAAT------------------------------------------GTCAGT------------------------GGAATCTGTGTTGGATTGGCCGCGGAGTGG------------CTCCTT---GATCTCCCAAGCAGCGCTTCCTCCCGAATGGGGGTTCTGCTCCCGGGCACG------GAAAATCACCGCTCGGCGGCAAGACGGCAGGAACAGTCTGAAAAGCTTAAGACTCAATTGAAAGAGGATAAGGCGGAAGGGTCTCAC---AATTTC...------------------...---------------...---------CAGGCAAAAAGCACAATCTTGCGTGACGCCGGCCTAGAACCATCTGCTGAAGAGACGCGATATAGG...---------------------------------------------TTTGGTACATCTTCGTGCATCGACAAGATCGTAAACGAGCTTGCGCAGGATCCATCCGTCCATTTGGTCAGCTTGAAATTC------GTCCAACCTGGCGCCGGCACCCACACGATTGCAACGGCAACGTCG---AATGGAACG---ACGATCCTCTCTGATCCTAACTATGGCGAATTTACTGTTCCGTCAGATCGG------------------GTCGGAGGGTTGTTTAAGAGTCTTGCCGAGCGCTATAGCACCCTGAACAAACGTGATATTTCGGCGGTCGTCACACAAAGGATC
Q9RBW5_PSESH/135-320 GATATCGAC------------GCAGTATTTAACTATAGAATTGCAGCGTTGAATAATGCGAAC------------------------------------------GCTAGT------------------------CAATCTTGTATGGGCTTGGCAATCCAATGG------------CTGCGATTGCGTGATGAGGAGGAGGCGAGTTACAGAATGGAGGCGCTGGATCTTGACCATGCT---------------------TCGGACATCCAGAACCAATACGAAAATGCAGCAGGTTCAGTGAGCGGGTCGCGGGAGCAGCGAGAAGCAGGTCGAATA...------------------...---------------...---------TCGGCGCGCAAAACCCTTTTGCGAAGTCAAGATTTGCAGCCTGTAGGTGAACCCTCGGTATTCCAT...------------------------------------------------------GCGGATCGGCAATCGACCGCATTGCAAAAAATTGCGCGCGATGGTAGCGTCCATTTGATCAGCTTGTGCTTT---GAAAACAATGGAAAGCGTGTAAGGCATGCCATCACTGCTTCCAGCTCC---GAAGGCAGT---GTGAACGTCTTTGATCCAAACTATGGCGAGTTCTCTACCACTTTACCGGAG------------------TTGCCTTCGATGTTCCAGAATCTGATGACCAGATACGGCAGTCGACTGAATGGGCACCTGCAATTGGAGAGCATGGTTATTCAG
AVP3_PSESH/79-259 CAAGTAAGCTTG---------AGTGATTTTTCTGTGGCTTCAAGAGATGTTAATCATAAC---------------------------------------------------------------------------AATATTTGTGCCGGCCTCTCCACGGAGTGG------------CTTGTAATGAGTAGTGACGGAGATGCAGAATCACGCATGGACCATCTCGACTATAACGGA------GAGGGACAAAGCAGGGGAAGCGAAAGGCATCAGGTTTATAATGATGCGTTACGTGCCGCACTATCAAATGATGATGAAGCACCTTTTTTCACAGCC...------------------...---------------...---------AGTACC------GCTGTTATCGAAGATGCTGGTTTCTCTCTACGCAGGGAACCAAAAACTGTTCAT...---------------------------------------GCGTCAGGTGGCAGTGCGCAATTGGGCCAGACAGTAGCCCATGATGTAGCTCAATCTGGTAGAAAACATTTGCTGAGCTTACGTTTT------------GCAAACGTTCAAGGACACGCAATCGCGTGCTCCTGTGAG---GGAAGTCAG---TTCAAGCTGTTTGACCCTAACCTCGGTGAGTTTCAATCATCCCGCAGCGCA------------------GCACCGCAGCTCATTAAGGGCTTAATAGATCACTATAAT------------------------AGCTTAAACTACGACGTAGCT
Q7VLE8_HAEDU/2801-3022 CGTAGTTCAGTA---------GAAGAATACGGCGGAGAAGTGACCTTCAAATATGCGCAATCAAAAGGTGAAGTGTATAATGAAATTGTTAAACATGCAGAGACACAAAAT------------------------GGCGTATGTGAAGCGACTTGTTCACACTGG------------ATAGCGAAGAAAGTCAAT------GATGAAAATATATGGACAGACTTATATAAAGATGGCCAA---AAAGGTAGAAAAGGCGGATTAAATAAAGATGCAATAGAGTCAATAGAAAAACTGCAAACTGAATTCATCAATGCAGGCACAGCAACCCAACAGTTC...------------------...---------------...---------AAACTAACTAACACATGGTTAGAAGAACAAGGCGTAGTACCAAAACAAAAATATTTTGGTAAATTG...---------------------AGCCGTGCGGATGAAGTTGCAGGAACGGTTTCAAAAAATGATGTTAGTGCATTAGTAAAAGCGATCCTAGATACCGGTAATGAAAGTAGTGCTGTGAAGAAAATC---TCAATAAACTTAGAGGGCGGCTCACACACCGTATCAGCAAGTATAGAA---GGGCAAAAA---GTTGTATTCTTTGACCCTAACTTTGGCGAAATTACCTTCAAAGATAAGAAAAGCTTCGAAAAATGGATGAAGAATGCATTCTGGAAGAAAAGTGGTTATGCCGGTAAGAAAGACACTAAACGCTTCTTTAATGTAGTGAACTATCATAAGAAT
P76_HAESO/653-873 CGTTCTTCCGTT---------GAAGAGTTTGGTGGAGAAGTAAGCTTTAAGTTTGCCCAATCTAAAGGAGAAGTTTACAAGGAAATTGTAAAACACATTGAAACACAAAAT------------------------GGTGTGTGTGAATCAACTTGTGCACATTGG------------ATTGCAAAAAATGTTAATCCAACCGACGAGAATTTCTTTAATACCCTTTATGAAGGTGGTAAA---AAAGGACAC---------TTGAAAAAAGAAACTATTGATTCTATTAAAAAACTTCAAACTGAGTTTATTAATAGCGGTAGTGCGACTCAACAATTC...------------------...---------------...---------AAATTGACAGATAGTTGGTTGCAAGAGCAGGGTGTTGTTCCGAAAGAGAAAAAAGTAGCAGATTTT...---------------------GTTCGTCGTGATGAAGTATCAGGAACTGTATCAAAAAATGATGTATCCTCATTAGTAAAAGCGATTTTGGATACAGGCGATGATACTGCCGGTGTTAAGAAAATC---TCCATTAATCTTGAGGGAGGATCTCACACTGTATCTGCGGCGGTTGAC---GGCTCAAAA---GTTACTTTCTTTGATCCGAATTTTGGTGAAATGACATTTCCAACTCATCAGCAGTTTGAGAATTGGTTGAAGAATGCATTTTGGCAAAAAAGTGGCTACGCTGGAAAGCAAGAAGGAAGACGTTTCTTTAATGTGGTCAACTACAAAAAAAAT
Q9CPH9_PASMU/3697-3917 CGTGCTTCAGTA---------GCAGAATATGGTGGAGAGGTCAGCTTTAAATATGCACAATCTAAAGGCGAAGTGTATAAAGAGATCGTGAAACACGTTGATACGCAACAT------------------------GGTGTGTGTGAATCCACGTGTGCCCACTGG------------ATTGCGAACAAAGTCAGTAGCCAAGGTGAAGACTTCTGGAATACGATGTACGAAGGCGGTAAG---AAAGGTCAC---------TTGAAGCAAGAGGCGATTGACTCGATTAAGAAACTGCAAACAGAGTTTATGCAAAGTGGCAGTGCGACGCAGCAATTC...------------------...---------------...---------AAATTGACTGATAATTGGTTACAAGAGCAAGGCGTAGTACCGAAAGAGAAAAAAGTCGGCGATTTG...---------------------AGCCGTCGTGATGAAGTGGCGGGTACGGTATCGAAAAGTGATATTTCCGCATTGACCAAAGCGATTTTAGATACGGGTAGCGATACTGCTGGCGCGAAGAAGATC---TCGATTAATCTTGAAGGCGGTTCACATACTGTGTCGGCGCTTGTTCAA---GGCGAAAAA---GTCGTATTTTTCGATCCAAACTTCGGCGAAATGACGTTCCCAAGCCATCAAAAATTTGAAAGTTGGCTCAAAGAAGCATTTTGGGAGAAAAGTGGTTATGCGGGTAAAAAAGAAGGTAAACGCTTCTTTAATGTAGTGAATTATCACGCAGAA
Q7N4D9_PHOLL/105-321 CGAAATTCGGCG---------AGTAAACACGGGGGGCAAGTCACCTTCAAATTTGCCCAAACCAAAGGGACCTTCCTAGACCAAATCATGAAACACAAAGACACCTCAGGC------------------------GGTGTCTGCGAGTCTATATCTGCTCATTGG------------ATAAGCGCCCATGCCAAG------GGTGAAAGCATCTTTGACCAACTCTATGTCGGGGGACAA---AAGGGAAAA---------TTTCATATCGACTCACTAGTTTCCATTAAGCAGTTACAGATGGAC---------AGTTATCTAGATGATGAACAAAGT...------------------...---------------...---------ACCATGACAGAGTACTGGCTTGGTACGCAAGGCATTCAGCCAATCATGCAAAAAAACGACGTGGAC...---------------------GAACACTCATCCAAGGTAGTCGGTCAAACCGGTAACAAAGGTACAACAGACCTATTACGCGCTATTCTGGATACGGGTGATAAAGGCTCAGGCTACAAGAAAATT---AGTTTTCTCGGAAAAATGGCTGGACATACTGTAGCGGCCTATGTGGAT---GATCAGAAAGGTGTCATCTTCTTTGATCCCAACTTCGGCGAATTCAGCTTCCCAAGCATAACTTCGTTTTCTCGCTGGTTCACTGACGATTTCTGGCCAAAATCTTGGTACAACCTGGAAATCGGTCTGGGACAACAATTTGAAGTCTTCAACTACGAGCTTAAA
Q7N0U1_PHOLL/100-325 CGAAATTCTGCG---------AGTAAGCACGGCGGCGAAATCACCTTCAAGTTCGCCCAGACCAAGGGGACCTTTCTGGATCAAATCATGAAACATAGTGACACCGCCGGC------------------------GGGGTTTGTGAATCCATATCAGCTCATTGG------------ATAAGCGCTCATGCCAAA------GGGGAAAGTGTCTTCGATCAACTCTATGTGGGCGGCCAA---AAAGGACAG---------TTTCATATCGACTCTCTGGTTTCCATTAAGCAGTTACAGATGGAT------GGTATAGCCCAAGATGTCGATCAAGAC...------------------...---------------...---------ACTATGACCGAATCTTGGCTTAGCGAAAATGGCATCCAACCACGCATGAAAACGATAACCTATCAAagcGCCAACGGGCCCATTAATTACAAACGTCCAATCGAAGTCAACGGTCAGACCGGCAGTAATGGCACATCAGATCTACTAAACGCTATTCTAGACACAGGCGATAAAGGTTCTAGCTATAAAAAGATT---AGTTTTTCAGGACAGATGGCCGGGCATGCCGTAGCCGCTTATGTAGAT---GACCAGAAGGGTGTTACTTTCTTTGACCCTAACTTTGGCGAGTTCCACTTTCCAAACAAAGAATCATTCTCTAATTGGTTCTCTCAAGATTTCTGGTCCAAATCCATGTACAACAAGGAAATCGGTCTTGGGCAACATTTCCAAGTCCTCAACTACGAGCCTAAA
YOPT_YERPE/103-320 AGAGAGTCTGTT---------GCAAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATAAAATAATAAAACATTCAGACACTGCTAGC------------------------GGTGTCTGTGAGGCTTTATGTGCACATTGG------------ATCAGGAGCCATGCACAA------GGCCAAAGCTTATTTGACCAGCTCTATGTTGGCGGGCGT---AAGGGGAAA---------TTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGAT------GGTTGTAAAGCAGACGTTGATCAAGAT...------------------...---------------...---------GAGGTAACACTAGATTGGTTCAAGAAAAATGGCATATCAGAACGTATGATTGAACGGCATTGCTTA...---------------------CTGCGTCCAGTTGATGTTACTGGTACGACGGAATCAGAAGGGCTGGATCAATTATTAAACGCTATCCTTGATACTCATGGGATAGGTTACGGTTATAAAAAAATA---CATCTCTCAGGCCAAATGTCAGCCCACGCCATAGCGGCGTATGTCAAC---GAAAAGAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCCGCAAATGGTTTACTAACTCATTCTGGGGTAATTCTATGTATCATTATCCTCTGGGGGTGGGGCAGCGTTTTAGAGTGTTAACATTTGACTCCAAG
Q7P1F8_CHRVO/133-334 CGCGCCGATTTG---------GCCAAGCTGGGCCTGACCGACATGAAGGAG------------------------------------------------------------------------------------GGCGTGTGCAACGGCCTGTCTTATGCCTGGGCCGAGGAACAGCTGAAAACCGGCAACGGCGCGAACACGCTGGATTGGATAGCCCGGGTGGCCGCCAGCGACAGCCTGGCGCGCGGCCCGCGCGGCGACGCGACGCCGTCTGCGCTCAGCCAATCGCGCATTCCTCTGCTCAACCAGCTCAAGAAGATGCAGGACTTCCAGTTCagcCAGTTCGCCAACACCGGCagtCCCAAGCAGGACATGagcAACTACCTGCAGGCGGTCGATGGCTGGGGCAAGCGCAACGGCATGGATGCCAGCGTGGACATCCTCAATCCCGGC...------------------------------------------------------GCGACGCCGGCCGAGCGCCAGCTATGCGCGCGTCTACCCGCGCACGACGACGGCGCGCTGGTGTTCCGCACC---------------------ACCGAACATACGATGGCCATGTCCAGCCGC---GGCGGAACC---TACAGCTTCTTCGAGCCCAACTACGGCATGGCCAGCTTCCAGGACAAGCGCCGCTTCGACGACTTCGTCGCCGCCTTCCTGCTGGCCGAG---------------------GGCCACAAGCCGCCGTTCATGCTGACCGAACTGAAGCTCGAC
Q9JP32_PSESM/128-344 AGAAAGATTGCC---------CAAGAGCACGGCTGTCAGCTTGTCCACCCGTTTCACCAGAGCAAATTTCTATTTGAAAAAACTATCGATGATAGAGCGTTTGCTGCTGACTATGGCCGCGCGGGTGGCGACGGGCACGCTTGTCTGGGGCTATCAGTAAATTGG------------TGTCAGAGCCGTGCA---------------------------------------------------AAAGGGCAGTCGGATGAGGCCTTCTTTCACAAACTGGAGGACTATCAGGGCGATGCATTGCTACCCAGGGTAATGGGCTTCCAGCATATCGAGCAG...------------------...---------------...---------CAGGCCTATTCAAACAAGTTGCAGAACGCAGCACCTATGCTTCTGGACACACTTCCCAAGTTGGGC...ATGACACTTGGAAAAGGGCTGGGCAGAGCACAGCACGCGCACTATGCGGTTGCTCTGGAAAACCTTGATCGCGATCTCAAAGCAGTGTTGCAGCCCGGTAAAGACCAGATGCTTCTGTTTTTGAGT---------------------GATAGCCATGCGATGGCTCTGCATCAGGAC---AGTCAGGGATGTCTGCATTTTTTTGATCCTCTTTTTGGCGTGGTTCAGGCAGACAGCTTCAGCAACATGAGCCATTTT---CTTGCTGATGTGTTCAAGCGCGACGTAGGTACGCACTGGCGTGGCACGGAGCAACGTCTGCAACTGAGCGAAATGGTGCCCAGA