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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03471 phylogeny
for nucleotide alignment


 
(((((((((((((((((((Y1842_MYCTU/354-444,((Q9F2L6_STRCO/356-433,Q9FCB6_STRCO/357-434),Q9RKZ4_STRCO/357-434)),Q9S1P5_STRCO/354-438),Q9RSE8_DEIRA/352-432),(((Q9FDL7_ZYMMO/343-422,Q98I41_RHILO/349-428),((Q9KLA9_VIBCH/348-428,(Y452_HAEIN/349-429,Q9CKE5_PASMU/363-443)),YTFL_ECOLI/346-426)),((Y260_SYNY3/352-434,Q9PDU9_XYLFA/362-443),Q9AB67_CAUCR/350-429))),((P95814_STRSQ/4360-4432,Q9HN02_HALN1/357-436),Q9HTJ8_PSEAE/368-446)),((((CVRA_VIBCH/493-572,Q98FJ2_RHILO/492-572),(Q9RZJ9_DEIRA/353-431,Q9I413_PSEAE/437-515)),(Q9AC15_CAUCR/207-290,Q98BK0_RHILO/260-343)),(O83906_TREPA/238-319,Q9JTN9_NEIMA/436-516))),(Q9HHN9_HALN1/381-459,((Y2387_MYCBO/339-422,Q9RZJ8_DEIRA/345-425),((((((CORC_PASMU/207-285,CORC_BUCAI/204-282),CORC_VIBCH/203-281),CORC_ECOLI/205-283),Q9K0P8_NEIMB/196-274),Q9HX36_PSEAE/200-278),Q9PEX7_XYLFA/238-316)))),(Q98FY2_RHILO/216-294,Q9A426_CAUCR/316-394)),Q9HXP6_PSEAE/340-418),YFJD_ECOLI/334-412),Q9KUG3_VIBCH/342-420),Q9CLN4_PASMU/342-419),Q9ZCM2_RICPR/337-415),(YOAE_ECOLI/431-511,Y323_BUCAI/438-518)),(O84258_CHLTR/333-412,Q9JSF2_CHLPN/331-410)),(((((O51220_BORBU/332-411,Q99VS1_STAAM/354-432),(YRKA_BACSU/356-433,(YQHB_BACSU/365-442,(YHDP_BACSU/354-431,(YUGS_BACSU/356-433,YHDT_BACSU/357-433))))),(Q97J64_CLOAB/351-428,HLYC_TREHY/180-259)),Q9CEK3_LACLA/349-430),((((Q9EZL7_CYTJO/349-431,(Q9CEM3_LACLA/354-438,((Q9A1A4_STRPY/352-436,O68574_STRMU/352-436),Q97NQ5_STRPN/352-435))),(O84430_CHLTR/285-364,Q9Z842_CHLPN/302-381)),(Q97LU4_CLOAB/357-439,Y740_RICPR/214-295)),((Q9ZJC9_HELPJ/356-435,Q9PIU6_CAMJE/368-447),(O83655_TREPA/174-252,O51086_BORBU/179-257))))),(((O66507_AQUAE/328-406,O67884_AQUAE/337-416),Q9WZU9_THEMA/353-431),Q9LG18_ARATH/771-877)),(O83071_TREPA/329-407,O83072_TREPA/369-447)),Q9PKD7_CHLMU/326-404,Q9Z8E8_CHLPN/325-403);
(((((((((((((((((((Y1842_MYCTU/354-444:0.52602,((Q9F2L6_STRCO/356-433:0.14944,Q9FCB6_STRCO/357-434:0.33973):0.07161,Q9RKZ4_STRCO/357-434:0.21150):0.07471):0.06939,Q9S1P5_STRCO/354-438:0.31869):0.09476,Q9RSE8_DEIRA/352-432:0.47628):0.01953,(((Q9FDL7_ZYMMO/343-422:0.57457,Q98I41_RHILO/349-428:0.11080):0.15215,((Q9KLA9_VIBCH/348-428:0.19274,(Y452_HAEIN/349-429:0.12054,Q9CKE5_PASMU/363-443:0.17770):0.19664):0.09336,YTFL_ECOLI/346-426:0.03267):0.40973):0.08690,((Y260_SYNY3/352-434:0.43171,Q9PDU9_XYLFA/362-443:0.27681):0.07117,Q9AB67_CAUCR/350-429:0.34121):0.03407):0.12429):0.03856,((P95814_STRSQ/4360-4432:0.59974,Q9HN02_HALN1/357-436:0.21499):0.09953,Q9HTJ8_PSEAE/368-446:0.53255):0.09459):0.03012,((((CVRA_VIBCH/493-572:0.70448,Q98FJ2_RHILO/492-572:0.43417):0.10131,(Q9RZJ9_DEIRA/353-431:0.45386,Q9I413_PSEAE/437-515:0.43574):0.06107):0.07503,(Q9AC15_CAUCR/207-290:0.31464,Q98BK0_RHILO/260-343:0.40711):0.12086):0.06587,(O83906_TREPA/238-319:0.63080,Q9JTN9_NEIMA/436-516:0.40101):0.24938):0.02079):0.04727,(Q9HHN9_HALN1/381-459:0.40167,((Y2387_MYCBO/339-422:0.42949,Q9RZJ8_DEIRA/345-425:0.39203):0.18546,((((((CORC_PASMU/207-285:0.25160,CORC_BUCAI/204-282:0.33514):0.13774,CORC_VIBCH/203-281:0.20570):0.12637,CORC_ECOLI/205-283:0.11287):0.27595,Q9K0P8_NEIMB/196-274:0.29453):0.09684,Q9HX36_PSEAE/200-278:0.21958):0.04473,Q9PEX7_XYLFA/238-316:0.29125):0.11297):0.07612):0.08660):0.17302,(Q98FY2_RHILO/216-294:0.21515,Q9A426_CAUCR/316-394:0.24219):0.19115):0.12020,Q9HXP6_PSEAE/340-418:0.31749):0.32850,YFJD_ECOLI/334-412:0.20386):0.12064,Q9KUG3_VIBCH/342-420:0.31480):0.19682,Q9CLN4_PASMU/342-419:0.15429):0.19408,Q9ZCM2_RICPR/337-415:0.45260):0.13255,(YOAE_ECOLI/431-511:0.40938,Y323_BUCAI/438-518:0.17933):0.32608):0.02789,(O84258_CHLTR/333-412:0.20894,Q9JSF2_CHLPN/331-410:0.32454):0.33160):0.11666,(((((O51220_BORBU/332-411:0.47701,Q99VS1_STAAM/354-432:0.40721):0.12457,(YRKA_BACSU/356-433:0.33155,(YQHB_BACSU/365-442:0.31282,(YHDP_BACSU/354-431:0.25263,(YUGS_BACSU/356-433:0.24059,YHDT_BACSU/357-433:0.46894):0.05760):0.07126):0.08595):0.26168):0.08396,(Q97J64_CLOAB/351-428:0.33788,HLYC_TREHY/180-259:0.46157):0.06525):0.05668,Q9CEK3_LACLA/349-430:0.55187):0.03413,((((Q9EZL7_CYTJO/349-431:0.32226,(Q9CEM3_LACLA/354-438:0.39943,((Q9A1A4_STRPY/352-436:0.19665,O68574_STRMU/352-436:0.14052):0.11264,Q97NQ5_STRPN/352-435:0.19771):0.14252):0.13390):0.09012,(O84430_CHLTR/285-364:0.15387,Q9Z842_CHLPN/302-381:0.20672):0.44305):0.05368,(Q97LU4_CLOAB/357-439:0.34932,Y740_RICPR/214-295:0.50724):0.07841):0.03123,((Q9ZJC9_HELPJ/356-435:0.40462,Q9PIU6_CAMJE/368-447:0.21293):0.26872,(O83655_TREPA/174-252:0.50675,O51086_BORBU/179-257:0.32628):0.13030):0.05885):0.03691):0.06530):0.08622,(((O66507_AQUAE/328-406:0.49773,O67884_AQUAE/337-416:0.30510):0.15065,Q9WZU9_THEMA/353-431:0.33119):0.16262,Q9LG18_ARATH/771-877:0.66577):0.10021):0.13344,(O83071_TREPA/329-407:0.46482,O83072_TREPA/369-447:0.51790):0.24546):0.44895,Q9PKD7_CHLMU/326-404:0.30654,Q9Z8E8_CHLPN/325-403:0.21585);