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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03330 phylogeny
for amino acid alignment


 
(((((((((((((((((((Q946I1_ORYSA/65-158,Q9SDE4_ORYSA/62-146),Q9SDZ3_9FILI/63-148),((((((Q946I9_ORYSA/59-146,Q9FY31_FESPR/62-149),((Q8LMP7_ORYSA/65-153,Q946H7_ORYSA/62-150),O24208_ORYSA/69-157)),((Q7X9Q2_SAMNI/65-153,Q8LG16_ARATH/61-149),Q9ZP38_TOBAC/65-153)),(((Q7XE34_ORYSA/62-150,((Q9FY29_FESPR/64-151,Q9FY28_FESPR/60-147),Q8LMP8_ORYSA/84-161)),Q7XE35_ORYSA/59-147),Q946H8_ORYSA/85-173)),(Q8H6F7_MUSAC/60-147,((Q9XHW9_ORYSA/62-149,Q9XHX0_ORYSA/60-147),Q40637_ORYSA/63-151))),EXP17_ARATH/63-151)),((EXPA2_ARATH/67-152,Q84L49_MIRJA/65-150),((P93442_ORYSA/59-144,Q9FY30_FESPR/64-150),Q9AYR1_EUSGR/33-120))),((Q7XJA5_MARPO/33-124,Q9FYS9_9LAMI/22-113),Q84L40_MIRJA/67-154)),(((EXP24_ARATH/125-208,(Q8LGS7_PHYPA/73-158,Q9ZTG7_LYCES/19-103)),(((EXPA5_ARATH/73-151,Q8S347_CAPAN/59-136),Q8L9W7_ARATH/58-143),(Q84L77_PYRCO/65-150,Q9SWD3_9CARY/17-94))),((Q8LKJ9_GOSHI/67-151,EXP12_ARATH/62-146),((Q8W2X8_ORYSA/72-160,(EXPA7_ARATH/72-157,EXP18_ARATH/66-152)),Q9SNH7_ORYSA/89-175)))),((Q7XUD0_ORYSA/67-153,Q8LAT2_ARATH/75-161),(Q946I5_ORYSA/18-105,EXP20_ARATH/65-152))),Q7XJA1_PHYPA/86-171),Q7XJA2_PHYPA/67-149),Q84V44_PHYPA/67-150),(Q84V43_PHYPA/66-153,Q84V45_PHYPA/65-152)),Q8H276_ORYSA/110-180),((O65013_PINRA/74-152,((EXPR1_ARATH/62-139,Q8H4Q7_ORYSA/61-139),((Q84L47_MIRJA/44-123,(Q7XHJ2_QUERO/61-138,Q8LC65_ARATH/58-137)),(Q8H274_ORYSA/71-148,(Q7XCL0_ORYSA/68-146,Q8LGS6_ORYSA/74-151))))),((((Q84V41_PHYPA/70-157,Q84V42_PHYPA/73-155),((Q9FQ82_ORYSA/80-159,((Q94LR4_ORYSA/92-171,(((Q7XCG7_ORYSA/80-159,((MPAC1_CYNDA/56-135,MPAL1_LOLPR/78-157),Q8H7T4_ORYSA/78-157)),Q84UA7_MAIZE/80-159),Q94KT1_MAIZE/22-101)),(O24230_ORYSA/68-147,Q9ZR84_WHEAT/77-158))),Q949I4_FESPR/69-150)),(((Q7XT39_ORYSA/81-163,(Q946J6_ORYSA/100-182,Q94KT0_MAIZE/117-199)),Q941I7_ORYSA/75-166),((Q84WA9_ARATH/69-151,Q9AXE4_TOBAC/81-163),(((EXPB5_ARATH/70-149,EXPB2_ARATH/83-163),Q39802_SOYBN/84-165),Q9FRU8_ATRLE/80-160)))),((Q8LBG2_ARATH/66-146,Q8LLL9_ORYSA/84-166),EXPB1_ARATH/76-159)))),((EXPR2_ARATH/45-121,Q9ZP41_9ROSI/51-128),Q84V62_HEDHE/26-102)),((Q93MF1_AMYMD/34-132,Q9X5U4_STRLA/36-135),((Q97TP0_CLOAB/118-201,(Q89QY0_BRAJA/43-149,((Q89JS4_BRAJA/38-126,(((((RLPA_SYNY3/227-317,Q8DLZ3_SYNEL/217-307),(Q89X70_BRAJA/74-161,RLPA_ANASP/274-366)),(Q7U7N8_SYNPX/60-150,(Q7U4N9_SYNPX/113-203,Q7V582_PROMM/105-195))),((((Q7NLH5_GLOVI/257-347,Q89G77_BRAJA/82-168),(Q98DT8_RHILO/32-119,(Q8FXW2_BRUSU/28-115,Q8UIK3_AGRT5/29-116))),((O67382_AQUAE/55-145,(((RLPA_HAEIN/69-159,RLPA_PASMU/68-158),((RLPA_HELPY/115-205,Q7M7V1_WOLSU/75-165),RLPA_CAMJE/77-167)),((((RLPA_NEIMA/59-149,(((Q83CW5_COXBU/71-161,(Q7NPV8_CHRVO/99-189,Q7W015_BORPE/84-174)),((Q7MN13_VIBVY/80-170,Q82T62_NITEU/105-195),Q87C59_XYLFT/126-216)),(Q87VW3_PSESM/103-193,Q8EHQ2_SHEON/98-188))),((Q89LM2_BRAJA/151-241,(Q8G0U5_BRUSU/105-195,Q8UF98_AGRT5/115-205)),(Q7PBP9_RICSI/166-259,(O51677_BORBU/44-134,Q8F9X6_LEPIN/103-193)))),(Q8KA94_CHLTE/70-164,Q9A7A1_CAUCR/66-156)),((RLPA_TREPA/27-117,Q8KAS8_CHLTE/66-156),Q7VKA6_HAEDU/76-166)))),(Q8XUC4_RALSO/94-184,(Q7N763_PHOLL/72-162,(RLPA_ECOLI/78-166,RLPA_YERPE/75-165))))),(Q87WR7_PSESM/28-118,Q9HVT6_PSEAE/31-121))),RLPA_AQUAE/129-219)),Y3177_SYNY3/1-87))),YDJM_BACSU/30-121))),Q9AF65_CLAMS/559-624),(Q7S4C4_NEUCR/73-147,Q9P8A6_AGABI/167-239)),O34918_BACSU/58-127),Q87AG9_XYLFT/395-464,Q8P513_XANCP/417-486);
(((((((((((((((((((Q946I1_ORYSA/65-158:0.40171,Q9SDE4_ORYSA/62-146:0.13528):0.12545,Q9SDZ3_9FILI/63-148:0.17516):0.10204,((((((Q946I9_ORYSA/59-146:0.05032,Q9FY31_FESPR/62-149:0.21589):0.15513,((Q8LMP7_ORYSA/65-153:0.11361,Q946H7_ORYSA/62-150:0.16717):0.07701,O24208_ORYSA/69-157:0.20931):0.06600):0.02832,((Q7X9Q2_SAMNI/65-153:0.11387,Q8LG16_ARATH/61-149:0.16372):0.04885,Q9ZP38_TOBAC/65-153:0.10999):0.02415):0.09777,(((Q7XE34_ORYSA/62-150:0.13630,((Q9FY29_FESPR/64-151:0.23219,Q9FY28_FESPR/60-147:0.03325):0.08637,Q8LMP8_ORYSA/84-161:0.18619):0.08576):0.01151,Q7XE35_ORYSA/59-147:0.16411):0.05003,Q946H8_ORYSA/85-173:0.11614):0.04966):0.05954,(Q8H6F7_MUSAC/60-147:0.17400,((Q9XHW9_ORYSA/62-149:0.26023,Q9XHX0_ORYSA/60-147:0.03586):0.05146,Q40637_ORYSA/63-151:0.18215):0.04577):0.04479):0.09688,EXP17_ARATH/63-151:0.19979):0.11976):0.02240,((EXPA2_ARATH/67-152:0.21902,Q84L49_MIRJA/65-150:0.07840):0.05294,((P93442_ORYSA/59-144:0.03412,Q9FY30_FESPR/64-150:0.23507):0.08810,Q9AYR1_EUSGR/33-120:0.14493):0.06710):0.04026):0.01324,((Q7XJA5_MARPO/33-124:0.42739,Q9FYS9_9LAMI/22-113:0.35929):0.11074,Q84L40_MIRJA/67-154:0.11772):0.07765):0.03392,(((EXP24_ARATH/125-208:0.11727,(Q8LGS7_PHYPA/73-158:0.35089,Q9ZTG7_LYCES/19-103:0.28906):0.14683):0.13218,(((EXPA5_ARATH/73-151:0.20896,Q8S347_CAPAN/59-136:0.11978):0.06808,Q8L9W7_ARATH/58-143:0.15731):0.02802,(Q84L77_PYRCO/65-150:0.05327,Q9SWD3_9CARY/17-94:0.20531):0.08828):0.04694):0.04725,((Q8LKJ9_GOSHI/67-151:0.08298,EXP12_ARATH/62-146:0.17802):0.29320,((Q8W2X8_ORYSA/72-160:0.20668,(EXPA7_ARATH/72-157:0.13197,EXP18_ARATH/66-152:0.24080):0.09483):0.21717,Q9SNH7_ORYSA/89-175:0.23127):0.14860):0.10056):0.02776):0.12837,((Q7XUD0_ORYSA/67-153:0.11544,Q8LAT2_ARATH/75-161:0.29222):0.31989,(Q946I5_ORYSA/18-105:0.27017,EXP20_ARATH/65-152:0.19777):0.20947):0.10644):0.06313,Q7XJA1_PHYPA/86-171:0.33895):0.13382,Q7XJA2_PHYPA/67-149:0.22082):0.10883,Q84V44_PHYPA/67-150:0.15694):0.11959,(Q84V43_PHYPA/66-153:0.10486,Q84V45_PHYPA/65-152:0.20212):0.35751):0.20926,Q8H276_ORYSA/110-180:0.29511):0.36319,((O65013_PINRA/74-152:0.47672,((EXPR1_ARATH/62-139:0.42851,Q8H4Q7_ORYSA/61-139:0.32194):0.20510,((Q84L47_MIRJA/44-123:0.39101,(Q7XHJ2_QUERO/61-138:0.21168,Q8LC65_ARATH/58-137:0.16927):0.11118):0.08426,(Q8H274_ORYSA/71-148:0.46468,(Q7XCL0_ORYSA/68-146:0.17669,Q8LGS6_ORYSA/74-151:0.08527):0.10386):0.16578):0.12695):0.07317):0.28004,((((Q84V41_PHYPA/70-157:0.41563,Q84V42_PHYPA/73-155:0.15425):0.41319,((Q9FQ82_ORYSA/80-159:0.28958,((Q94LR4_ORYSA/92-171:0.17187,(((Q7XCG7_ORYSA/80-159:0.14958,((MPAC1_CYNDA/56-135:0.17007,MPAL1_LOLPR/78-157:0.24008):0.15411,Q8H7T4_ORYSA/78-157:0.17905):0.02194):0.12258,Q84UA7_MAIZE/80-159:0.19688):0.12137,Q94KT1_MAIZE/22-101:0.08986):0.04918):0.05001,(O24230_ORYSA/68-147:0.01571,Q9ZR84_WHEAT/77-158:0.28525):0.04627):0.08709):0.04426,Q949I4_FESPR/69-150:0.25697):0.28383):0.10885,(((Q7XT39_ORYSA/81-163:0.15870,(Q946J6_ORYSA/100-182:0.08285,Q94KT0_MAIZE/117-199:0.22638):0.12136):0.03880,Q941I7_ORYSA/75-166:0.22229):0.11389,((Q84WA9_ARATH/69-151:0.18565,Q9AXE4_TOBAC/81-163:0.42702):0.10016,(((EXPB5_ARATH/70-149:0.36315,EXPB2_ARATH/83-163:0.03205):0.10276,Q39802_SOYBN/84-165:0.30405):0.07036,Q9FRU8_ATRLE/80-160:0.21720):0.04463):0.05059):0.10186):0.10302,((Q8LBG2_ARATH/66-146:0.18429,Q8LLL9_ORYSA/84-166:0.22659):0.11710,EXPB1_ARATH/76-159:0.18624):0.30413):0.08885):0.30071):0.32070,((EXPR2_ARATH/45-121:0.26993,Q9ZP41_9ROSI/51-128:0.24909):0.23567,Q84V62_HEDHE/26-102:0.54034):0.20600):0.09701,((Q93MF1_AMYMD/34-132:0.14096,Q9X5U4_STRLA/36-135:0.57137):0.74620,((Q97TP0_CLOAB/118-201:0.57062,(Q89QY0_BRAJA/43-149:0.84091,((Q89JS4_BRAJA/38-126:0.63866,(((((RLPA_SYNY3/227-317:0.15092,Q8DLZ3_SYNEL/217-307:0.14257):0.08058,(Q89X70_BRAJA/74-161:0.36683,RLPA_ANASP/274-366:0.09584):0.06483):0.05230,(Q7U7N8_SYNPX/60-150:0.19940,(Q7U4N9_SYNPX/113-203:0.12651,Q7V582_PROMM/105-195:0.11099):0.13039):0.15634):0.06157,((((Q7NLH5_GLOVI/257-347:0.35023,Q89G77_BRAJA/82-168:0.29238):0.14200,(Q98DT8_RHILO/32-119:0.03140,(Q8FXW2_BRUSU/28-115:0.07443,Q8UIK3_AGRT5/29-116:0.24928):0.14802):0.27186):0.08832,((O67382_AQUAE/55-145:0.36614,(((RLPA_HAEIN/69-159:0.25620,RLPA_PASMU/68-158:0.13327):0.21247,((RLPA_HELPY/115-205:0.14019,Q7M7V1_WOLSU/75-165:0.15326):0.10701,RLPA_CAMJE/77-167:0.14230):0.13996):0.11149,((((RLPA_NEIMA/59-149:0.17083,(((Q83CW5_COXBU/71-161:0.37177,(Q7NPV8_CHRVO/99-189:0.19943,Q7W015_BORPE/84-174:0.26617):0.04382):0.07650,((Q7MN13_VIBVY/80-170:0.12763,Q82T62_NITEU/105-195:0.26527):0.05833,Q87C59_XYLFT/126-216:0.22938):0.03595):0.05049,(Q87VW3_PSESM/103-193:0.20945,Q8EHQ2_SHEON/98-188:0.20515):0.08333):0.07403):0.03879,((Q89LM2_BRAJA/151-241:0.20125,(Q8G0U5_BRUSU/105-195:0.16632,Q8UF98_AGRT5/115-205:0.25841):0.08123):0.14205,(Q7PBP9_RICSI/166-259:0.29825,(O51677_BORBU/44-134:0.26211,Q8F9X6_LEPIN/103-193:0.27223):0.05068):0.07662):0.06252):0.05389,(Q8KA94_CHLTE/70-164:0.36039,Q9A7A1_CAUCR/66-156:0.20117):0.08056):0.07740,((RLPA_TREPA/27-117:0.23893,Q8KAS8_CHLTE/66-156:0.27532):0.13121,Q7VKA6_HAEDU/76-166:0.31740):0.10145):0.03508):0.03825):0.04429,(Q8XUC4_RALSO/94-184:0.41156,(Q7N763_PHOLL/72-162:0.09618,(RLPA_ECOLI/78-166:0.33393,RLPA_YERPE/75-165:0.08079):0.15006):0.23429):0.17612):0.08569):0.04275,(Q87WR7_PSESM/28-118:0.21027,Q9HVT6_PSEAE/31-121:0.15559):0.07548):0.03405):0.03156,RLPA_AQUAE/129-219:0.49611):0.08001):0.11091,Y3177_SYNY3/1-87:0.53820):0.12704):0.13099):0.04046,YDJM_BACSU/30-121:1.24942):0.34780):0.34752):0.13229,Q9AF65_CLAMS/559-624:0.37963):0.16976,(Q7S4C4_NEUCR/73-147:0.62943,Q9P8A6_AGABI/167-239:0.89257):0.05631):0.52382,O34918_BACSU/58-127:0.22620):0.07093,Q87AG9_XYLFT/395-464:0.19712,Q8P513_XANCP/417-486:0.06912);