EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03288 - Pox_D5)
Poxvirus D5 protein-like
(Pfam reference: accession no. PF03288)
(Interpro reference: accession no. IPR004968)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
18 sequences @ 366 aa
(ave. pairwise identity: 0.24)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 14.26)
nucleotides
(available for above)
18 sequences @ 1098 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 9.90)
amino acids, restricted set
(corresp. to available nt seqs)
18 sequences @ 366 aa
(ave. pairwise identity: 0.24)
New Hampshire format
(total tree length: 14.26)