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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02987 phylogeny
for amino acid alignment


 
((((((((((((LEA2_CICAR/81-149,Q43478_HORVU/14-83),(((Q39871_SOYBN/280-349,Q9XFD0_WHEAT/10-79),LEA1_HORVU/32-101),(LEA1_CICAR/8-77,Q96270_ARATH/9-78))),((Q40696_ORYSA/28-97,Q40709_ORYSA/28-97),((Q42315_ARATH/2-71,Q9SUB2_ARATH/164-232),Q9SDV6_WHEAT/67-136))),((LE29_GOSHI/207-276,Q9ZRT9_ARATH/52-121),(((((DRPF_CRAPL/50-119,Q96271_ARATH/37-106),(((LE76_BRANA/136-209,(LEA1_CICAR/81-154,Q9T0H6_ARATH/24-97)),((LEA1_HORVU/105-178,(O23980_HORVU/42-109,P93614_WHEAT/87-156)),(LEA3_MAIZE/112-185,O04815_SPOST/48-121))),LE7_GOSHI/37-110)),((Q39871_SOYBN/353-422,Q39681_DAUCA/51-120),((O68678_BACME/31-98,O76508_EIMAC/30-106),Q9ZRT9_ARATH/216-285))),Q9ULG6_HUMAN/488-561),(Q96246_ARATH/287-359,(Q19790_CAEEL/373-442,Q41154_9MARC/66-131))))),((((LE29_GOSHI/119-188,Q39801_SOYBN/400-469),((Q96246_ARATH/137-206,((Q06431_BETVE/174-243,(LED8_DAUCA/189-257,(Q9SIN3_ARATH/295-364,Q96246_ARATH/71-135))),(LED8_DAUCA/258-323,Q39871_SOYBN/130-199))),((Q96246_ARATH/214-283,Q9ZTY1_SOYBN/164-233),((LED8_DAUCA/331-400,Q06431_BETVE/244-309),LED8_DAUCA/120-185)))),(((Q9SI55_ARATH/111-184,Q9ZPQ7_ARATH/107-180),(Q41154_9MARC/201-271,(LED8_DAUCA/51-116,(O23221_ARATH/190-258,((Q9ZPW6_ARATH/305-374,((Q9ZPW6_ARATH/82-151,Q9ZPW6_ARATH/232-301),Q9ZPW6_ARATH/159-228)),O23221_ARATH/124-189))))),Q9ZPW6_ARATH/378-447)),((Q40869_PICGL/124-190,Q9SVQ4_ARATH/90-156),(Q9XES7_SOYBN/64-133,LE29_GOSHI/41-110)))),((Q9SPJ6_SOYBN/36-105,Q9SUB2_ARATH/94-163),((O16527_CAEEL/119-188,(O16527_CAEEL/647-716,Q9XTH4_CAEEL/76-145)),(Q40929_PSEMZ/10-79,Q9SDL9_VICFA/80-149)))),(((Q9XTH4_CAEEL/3-72,Q9XTH4_CAEEL/163-232),(O16527_CAEEL/342-413,O16527_CAEEL/502-570)),(O16527_CAEEL/428-501,(O16527_CAEEL/199-268,O16527_CAEEL/272-341)))),(UB72_DEIRA/128-197,((DRPF_CRAPL/123-192,Q41060_PEA/245-314),Q39660_CHLVU/96-169))),((Q39801_SOYBN/199-265,(Q39801_SOYBN/125-191,Q39801_SOYBN/266-327)),Q39873_SOYBN/255-324)),(O16527_CAEEL/5-74,Q9XTH4_CAEEL/323-392)),UB72_DEIRA/48-117),Q9VA86_DROME/314-379,Q9VA86_DROME/397-470);
((((((((((((LEA2_CICAR/81-149:0.44374,Q43478_HORVU/14-83:1.11471):0.55027,(((Q39871_SOYBN/280-349:0.79738,Q9XFD0_WHEAT/10-79:0.05560):0.19489,LEA1_HORVU/32-101:0.38931):0.07045,(LEA1_CICAR/8-77:0.28308,Q96270_ARATH/9-78:0.37182):0.17967):0.22759):0.12418,((Q40696_ORYSA/28-97:0.27314,Q40709_ORYSA/28-97:0.62005):0.02273,((Q42315_ARATH/2-71:0.41840,Q9SUB2_ARATH/164-232:0.34135):0.45592,Q9SDV6_WHEAT/67-136:0.60623):0.31098):0.14089):0.19833,((LE29_GOSHI/207-276:0.70667,Q9ZRT9_ARATH/52-121:0.70185):0.33539,(((((DRPF_CRAPL/50-119:0.71884,Q96271_ARATH/37-106:0.61840):0.10070,(((LE76_BRANA/136-209:0.53423,(LEA1_CICAR/81-154:0.19198,Q9T0H6_ARATH/24-97:0.65862):0.12116):0.08830,((LEA1_HORVU/105-178:0.01351,(O23980_HORVU/42-109:0.29136,P93614_WHEAT/87-156:0.35078):0.39204):0.17693,(LEA3_MAIZE/112-185:0.18818,O04815_SPOST/48-121:0.27453):0.11008):0.20861):0.07385,LE7_GOSHI/37-110:0.39893):0.12877):0.20447,((Q39871_SOYBN/353-422:0.68082,Q39681_DAUCA/51-120:0.82802):0.31449,((O68678_BACME/31-98:0.87512,O76508_EIMAC/30-106:0.47499):0.21856,Q9ZRT9_ARATH/216-285:0.70574):0.00000):0.13746):0.05041,Q9ULG6_HUMAN/488-561:1.54106):0.00000,(Q96246_ARATH/287-359:0.91141,(Q19790_CAEEL/373-442:1.04993,Q41154_9MARC/66-131:0.70527):0.06866):0.21551):0.00517):0.24805):0.10648,((((LE29_GOSHI/119-188:0.54669,Q39801_SOYBN/400-469:0.30967):0.68689,((Q96246_ARATH/137-206:0.35480,((Q06431_BETVE/174-243:0.30278,(LED8_DAUCA/189-257:0.32691,(Q9SIN3_ARATH/295-364:0.79827,Q96246_ARATH/71-135:0.52900):0.08901):0.08080):0.14730,(LED8_DAUCA/258-323:0.22657,Q39871_SOYBN/130-199:0.19690):0.08374):0.15593):0.08620,((Q96246_ARATH/214-283:0.23656,Q9ZTY1_SOYBN/164-233:0.24450):0.33605,((LED8_DAUCA/331-400:0.19592,Q06431_BETVE/244-309:0.16933):0.10006,LED8_DAUCA/120-185:0.40025):0.17185):0.00000):0.23059):0.33390,(((Q9SI55_ARATH/111-184:0.41029,Q9ZPQ7_ARATH/107-180:0.01219):0.82432,(Q41154_9MARC/201-271:1.06005,(LED8_DAUCA/51-116:1.20288,(O23221_ARATH/190-258:0.68167,((Q9ZPW6_ARATH/305-374:0.62450,((Q9ZPW6_ARATH/82-151:0.26117,Q9ZPW6_ARATH/232-301:0.30959):0.00000,Q9ZPW6_ARATH/159-228:0.27053):0.23215):0.07131,O23221_ARATH/124-189:0.22235):0.08212):0.20016):0.04590):0.10012):0.13230,Q9ZPW6_ARATH/378-447:1.18194):0.04477):0.09055,((Q40869_PICGL/124-190:0.22691,Q9SVQ4_ARATH/90-156:0.92018):0.45180,(Q9XES7_SOYBN/64-133:1.24741,LE29_GOSHI/41-110:0.96841):0.17322):0.29250):0.08234):0.08880,((Q9SPJ6_SOYBN/36-105:0.62045,Q9SUB2_ARATH/94-163:0.58912):0.09806,((O16527_CAEEL/119-188:0.56352,(O16527_CAEEL/647-716:0.43299,Q9XTH4_CAEEL/76-145:0.44872):0.20893):0.11821,(Q40929_PSEMZ/10-79:0.94280,Q9SDL9_VICFA/80-149:0.65900):0.23211):0.04385):0.17542):0.02170,(((Q9XTH4_CAEEL/3-72:0.32946,Q9XTH4_CAEEL/163-232:0.64838):0.44298,(O16527_CAEEL/342-413:0.68956,O16527_CAEEL/502-570:0.04428):0.24318):0.20121,(O16527_CAEEL/428-501:0.72959,(O16527_CAEEL/199-268:0.18188,O16527_CAEEL/272-341:0.31105):0.23971):0.00000):0.20307):0.24105,(UB72_DEIRA/128-197:0.52541,((DRPF_CRAPL/123-192:0.40084,Q41060_PEA/245-314:1.35256):0.26302,Q39660_CHLVU/96-169:0.91126):0.36275):0.06346):0.09466,((Q39801_SOYBN/199-265:0.31520,(Q39801_SOYBN/125-191:0.19650,Q39801_SOYBN/266-327:0.12255):0.18200):0.41670,Q39873_SOYBN/255-324:0.47292):0.17280):0.24560,(O16527_CAEEL/5-74:0.82925,Q9XTH4_CAEEL/323-392:0.78681):0.36979):0.26719,UB72_DEIRA/48-117:1.01966):0.49674,Q9VA86_DROME/314-379:0.15233,Q9VA86_DROME/397-470:0.15318);