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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02806 phylogeny
for nucleotide alignment


 
((((AMYM_BACST/444-527,(CDGT_THETU/437-521,(Q9ZAQ0_BACST/437-524,(Q59239_BACSP/454-537,CDGT_BACOH/432-515)))),(CDGT1_BACCI/444-527,(O52766_PAEMA/438-522,CDGT2_BACCI/437-521))),((AMY_CLOAB/394-465,Q48502_LACAM/409-477),CDGT_KLEOX/475-552)),((Q9U8X5_APIME/403-491,((O97396_PHACE/397-484,Q9U406_9CUCU/394-481),Q26854_TRICA/402-489)),(((O02622_CRAGI/421-509,AMY_PECMA/412-500),(Q91337_RANSY/205-293,(AMYC_HUMAN/422-510,Q98942_CHICK/423-511))),((Q9Y197_DERPT/403-493,Q52413_9PSED/373-461),AMY_ALTHA/383-470))),(Q9XZ45_LUTLO/409-496,(((Q17023_ANOGA/413-501,Q23767_CULTA/407-495),(Q16924_9DIPT/402-490,O02652_AEDAE/402-486)),(O77407_DROAN/405-493,((Q26193_PENVA/423-511,AMYA_DROME/405-493),((AMYR_DROAP/405-493,AMYR_DROPS/405-493),(Q25591_OSTNU/301-389,(((P97179_STRLI/388-464,AMY_STRLM/381-457),(O24781_BACSP/409-494,(AMY_STRVL/381-457,(O65947_STRSQ/375-451,AMY_STRTL/382-458)))),(AMY_STRHY/369-448,Q59964_STRSQ/374-457)))))))));
((((AMYM_BACST/444-527:0.35878,(CDGT_THETU/437-521:0.21768,(Q9ZAQ0_BACST/437-524:0.29527,(Q59239_BACSP/454-537:0.19178,CDGT_BACOH/432-515:0.17030):0.24306):0.11496):0.09502):0.00000,(CDGT1_BACCI/444-527:0.22001,(O52766_PAEMA/438-522:0.20347,CDGT2_BACCI/437-521:0.18752):0.12636):0.11108):0.43392,((AMY_CLOAB/394-465:0.44469,Q48502_LACAM/409-477:0.26088):0.23352,CDGT_KLEOX/475-552:0.53257):0.10534):0.30482,((Q9U8X5_APIME/403-491:0.28789,((O97396_PHACE/397-484:0.25102,Q9U406_9CUCU/394-481:0.15955):0.13941,Q26854_TRICA/402-489:0.20472):0.07347):0.00000,(((O02622_CRAGI/421-509:0.26892,AMY_PECMA/412-500:0.23465):0.09428,(Q91337_RANSY/205-293:0.29750,(AMYC_HUMAN/422-510:0.21088,Q98942_CHICK/423-511:0.17161):0.04793):0.12357):0.07400,((Q9Y197_DERPT/403-493:0.34528,Q52413_9PSED/373-461:0.38345):0.03942,AMY_ALTHA/383-470:0.46040):0.06117):0.07302):0.00000,(Q9XZ45_LUTLO/409-496:0.44401,(((Q17023_ANOGA/413-501:0.37618,Q23767_CULTA/407-495:0.21034):0.09251,(Q16924_9DIPT/402-490:0.13940,O02652_AEDAE/402-486:0.43753):0.12758):0.03661,(O77407_DROAN/405-493:0.29309,((Q26193_PENVA/423-511:0.19359,AMYA_DROME/405-493:0.12124):0.00000,((AMYR_DROAP/405-493:0.14049,AMYR_DROPS/405-493:0.19257):0.10676,(Q25591_OSTNU/301-389:0.25934,(((P97179_STRLI/388-464:0.13343,AMY_STRLM/381-457:0.07190):0.05116,(O24781_BACSP/409-494:0.24491,(AMY_STRVL/381-457:0.09575,(O65947_STRSQ/375-451:0.13376,AMY_STRTL/382-458:0.11446):0.07935):0.04965):0.04084):0.09020,(AMY_STRHY/369-448:0.15559,Q59964_STRSQ/374-457:0.16909):0.05018):0.14635):0.04384):0.06439):0.09035):0.07302):0.08043):0.11746);