EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02793 - HRM)
Hormone receptor domain
(Pfam reference: accession no. PF02793)
(Interpro reference: accession no. IPR001879)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
50 sequences @ 102 aa
(ave. pairwise identity: 0.29)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 30.94)
nucleotides
(available for above)
47 sequences @ 306 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 20.81)
amino acids, restricted set
(corresp. to available nt seqs)
47 sequences @ 102 aa
(ave. pairwise identity: 0.29)
New Hampshire format
(total tree length: 28.24)