EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02782 - FGGY_C)
FGGY family of carbohydrate kinases, C-terminal domain
(Pfam reference: accession no. PF02782)
(Interpro reference: accession no. IPR000577)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 245 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.01)
nucleotides
(available for above)
12 sequences @ 735 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 7.29)
amino acids, restricted set
(corresp. to available nt seqs)
12 sequences @ 245 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 10.33)