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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02779 phylogeny
for amino acid alignment


 
(((((((((((((((((Q9RYC0_DEIRA/22-198,((ODBB_BACSU/2-178,Q9RPS4_ENTFA/2-179),O84344_CHLTR/349-529)),Q9YBC3_AERPE/2-178),(ODBB_PSEPU/4-180,(((ODPB_BACST/2-179,Q9Y8I6_HALVO/4-182),(Q9XA61_STRCO/4-181,(Q9XA48_STRCO/7-184,O06160_MYCTU/24-201))),(ODPB_ACHLA/2-180,(ODPB_MYCPN/5-183,Q49109_MYCCA/2-180))))),((Q46143_9CLOT/2-180,(((ACOB_ALCEU/2-189,Q52015_PSEPU/3-190),(Q48430_KLEPN/2-194,Q57041_PELCA/3-193)),ACOB_BACSU/2-192)),((Q9Z8N3_CHLPN/7-183,((((O16144_ASCSU/30-206,(P79932_XENLA/12-188,ODPB_ASCSU/34-210)),(ODPB_SCHPO/36-214,ODPB_YEAST/37-215)),((ODPB_RHIME/136-314,ODPB_RICPR/1-179),ODPB_ZYMMO/137-315)),Q9ZQY3_MAIZE/37-215)),((O24458_ARATH/84-262,(ODPB_PORPU/2-180,Q9TLS3_CYACA/2-180)),P96103_THIFE/2-180)))),Q50851_MYXXA/1-172),((ODBB_HUMAN/69-245,Q93619_CAEEL/43-219),Q9SAV3_ARATH/30-206)),(((ODO1_ALCEU/595-795,(((ODO1_ECOLI/589-785,(ODO1_COXBU/589-785,Q9RXM3_DEIRA/590-790)),O85487_PSEPU/597-793),Q50992_NEIGO/232-432)),(((P94324_BRAJA/630-826,Q59736_RHOCA/631-827),ODO1_RICPR/583-779),((((O61199_CAEEL/649-868,(Q9ULD0_HUMAN/637-853,Q9VVC5_DROME/642-858)),Q9ZRQ2_ARATH/639-855),(O74378_SCHPO/642-855,ODO1_YEAST/644-857)),(Q23629_CAEEL/557-765,Q9VA02_DROME/568-774)))),((Q9Z8G5_CHLPN/567-763,ODO1_BACSU/590-789),(O50463_MYCTU/862-1063,P96746_CORGL/911-1109)))),(O52571_AMYMD/6-172,FAS3_RHOFA/15-177)),(((TKT_MYCGE/340-511,((TKT_TREPA/353-526,((((((TKT_RHOSH/349-522,(TKT_XANFL/355-528,(TKTC_ALCEU/359-531,((TKT2_ECOLI/352-524,TKT_HAEIN/353-527),Q60103_XANFL/374-546)))),(TKT_RHOCA/356-529,TKT2_RHIME/356-529)),((TKT_SCHPO/358-536,((TKT1_YEAST/353-532,TKT2_YEAST/354-533),(TKT_PICST/351-530,TKT1_CANAL/351-530))),((TKTC_CRAPL/207-381,Q9SMH7_CYAPA/458-632),P73282_SYNY3/357-533))),(TKT_MYCLE/373-557,Q9Z475_CORGL/352-534)),Q9ZM85_HELPJ/342-510),(O84755_CHLTR/355-527,TKT_AQUAE/375-548))),(TKT_STRPN/349-522,TKT_BACSU/352-525))),Q9RS71_DEIRA/356-529),(DAS_PICAN/364-548,DAS_CANBO/361-545))),((Q9ZC16_STRCO/303-468,((O96074_ASCSS/318-484,(Q9VHN7_DROME/317-483,O17759_CAEEL/311-477)),(TKT2_HUMAN/231-397,TKT_HUMAN/313-479))),(TKTC_METJA/7-174,(Q9V1I1_PYRAB/1-167,Q9YEJ5_AERPE/8-175)))),Y4MN_RHISN/34-201),(DXS_THEMA/297-464,DXS_TREPA/315-479)),(O96694_PLAFA/826-994,DXS_HELPJ/307-473)),(DXS_BACSU/314-480,(((DXS_AQUAE/316-481,DXS_HAEIN/318-483),((DXS_MYCLE/312-479,(DXS1_STRCO/314-481,O50408_MYCTU/210-376)),DXS_DEIRA/320-485)),(DXS_CHLPN/323-487,DXS_CHLTR/319-483)))),DXS_SYNLE/317-482),DXS_RHOCA/319-485),DXS_ARATH/397-563,O81954_CHLRE/402-568);
(((((((((((((((((Q9RYC0_DEIRA/22-198:0.20762,((ODBB_BACSU/2-178:0.21796,Q9RPS4_ENTFA/2-179:0.35023):0.08156,O84344_CHLTR/349-529:0.39176):0.12220):0.06239,Q9YBC3_AERPE/2-178:0.31216):0.02535,(ODBB_PSEPU/4-180:0.35433,(((ODPB_BACST/2-179:0.29371,Q9Y8I6_HALVO/4-182:0.24807):0.09227,(Q9XA61_STRCO/4-181:0.26538,(Q9XA48_STRCO/7-184:0.24951,O06160_MYCTU/24-201:0.27721):0.10890):0.14480):0.06834,(ODPB_ACHLA/2-180:0.18792,(ODPB_MYCPN/5-183:0.24507,Q49109_MYCCA/2-180:0.33226):0.14746):0.17952):0.11768):0.05299):0.04263,((Q46143_9CLOT/2-180:0.34975,(((ACOB_ALCEU/2-189:0.16962,Q52015_PSEPU/3-190:0.24036):0.07088,(Q48430_KLEPN/2-194:0.23619,Q57041_PELCA/3-193:0.20154):0.08163):0.06605,ACOB_BACSU/2-192:0.24325):0.17382):0.06999,((Q9Z8N3_CHLPN/7-183:0.20145,((((O16144_ASCSU/30-206:0.22514,(P79932_XENLA/12-188:0.08227,ODPB_ASCSU/34-210:0.23016):0.05760):0.03494,(ODPB_SCHPO/36-214:0.09814,ODPB_YEAST/37-215:0.14274):0.08404):0.06307,((ODPB_RHIME/136-314:0.11202,ODPB_RICPR/1-179:0.13524):0.02813,ODPB_ZYMMO/137-315:0.17618):0.09641):0.05486,Q9ZQY3_MAIZE/37-215:0.11282):0.20895):0.13600,((O24458_ARATH/84-262:0.13595,(ODPB_PORPU/2-180:0.09406,Q9TLS3_CYACA/2-180:0.15629):0.05883):0.23132,P96103_THIFE/2-180:0.44823):0.05510):0.23526):0.22332):0.04183,Q50851_MYXXA/1-172:0.71527):0.07663,((ODBB_HUMAN/69-245:0.14987,Q93619_CAEEL/43-219:0.17048):0.08563,Q9SAV3_ARATH/30-206:0.15225):0.18705):0.23832,(((ODO1_ALCEU/595-795:0.17295,(((ODO1_ECOLI/589-785:0.17351,(ODO1_COXBU/589-785:0.20819,Q9RXM3_DEIRA/590-790:0.15192):0.05100):0.02075,O85487_PSEPU/597-793:0.15247):0.03278,Q50992_NEIGO/232-432:0.28602):0.03408):0.10705,(((P94324_BRAJA/630-826:0.06913,Q59736_RHOCA/631-827:0.15537):0.06864,ODO1_RICPR/583-779:0.23279):0.03712,((((O61199_CAEEL/649-868:0.10064,(Q9ULD0_HUMAN/637-853:0.09471,Q9VVC5_DROME/642-858:0.09698):0.05167):0.14886,Q9ZRQ2_ARATH/639-855:0.12609):0.05756,(O74378_SCHPO/642-855:0.14316,ODO1_YEAST/644-857:0.15562):0.13881):0.04304,(Q23629_CAEEL/557-765:0.21132,Q9VA02_DROME/568-774:0.17807):0.18236):0.04680):0.07561):0.02582,((Q9Z8G5_CHLPN/567-763:0.29173,ODO1_BACSU/590-789:0.25247):0.10504,(O50463_MYCTU/862-1063:0.13140,P96746_CORGL/911-1109:0.15312):0.20073):0.03442):1.60257):1.26011,(O52571_AMYMD/6-172:0.26193,FAS3_RHOFA/15-177:0.45830):0.42115):0.36069,(((TKT_MYCGE/340-511:0.65563,((TKT_TREPA/353-526:0.43861,((((((TKT_RHOSH/349-522:0.13959,(TKT_XANFL/355-528:0.15039,(TKTC_ALCEU/359-531:0.19882,((TKT2_ECOLI/352-524:0.19383,TKT_HAEIN/353-527:0.12268):0.17260,Q60103_XANFL/374-546:0.17175):0.09999):0.14487):0.09432):0.05586,(TKT_RHOCA/356-529:0.17332,TKT2_RHIME/356-529:0.21837):0.11293):0.12387,((TKT_SCHPO/358-536:0.17119,((TKT1_YEAST/353-532:0.11352,TKT2_YEAST/354-533:0.12387):0.04814,(TKT_PICST/351-530:0.09042,TKT1_CANAL/351-530:0.13766):0.03389):0.04579):0.19668,((TKTC_CRAPL/207-381:0.12772,Q9SMH7_CYAPA/458-632:0.30141):0.10437,P73282_SYNY3/357-533:0.18572):0.10622):0.12083):0.07179,(TKT_MYCLE/373-557:0.22543,Q9Z475_CORGL/352-534:0.13377):0.17850):0.08223,Q9ZM85_HELPJ/342-510:0.51488):0.01876,(O84755_CHLTR/355-527:0.28805,TKT_AQUAE/375-548:0.28119):0.10015):0.00385):0.02698,(TKT_STRPN/349-522:0.29349,TKT_BACSU/352-525:0.11290):0.10063):0.04531):0.05827,Q9RS71_DEIRA/356-529:0.25519):0.25775,(DAS_PICAN/364-548:0.24009,DAS_CANBO/361-545:0.09114):0.46110):0.55540):0.05757,((Q9ZC16_STRCO/303-468:0.35228,((O96074_ASCSS/318-484:0.28326,(Q9VHN7_DROME/317-483:0.15235,O17759_CAEEL/311-477:0.19392):0.05528):0.03870,(TKT2_HUMAN/231-397:0.26004,TKT_HUMAN/313-479:0.09526):0.03299):0.17769):0.46143,(TKTC_METJA/7-174:0.32731,(Q9V1I1_PYRAB/1-167:0.16224,Q9YEJ5_AERPE/8-175:0.57530):0.32858):0.09506):0.09942):0.14429,Y4MN_RHISN/34-201:0.68772):0.39985,(DXS_THEMA/297-464:0.30189,DXS_TREPA/315-479:0.41025):0.07852):0.03338,(O96694_PLAFA/826-994:0.65084,DXS_HELPJ/307-473:0.31067):0.10071):0.12056,(DXS_BACSU/314-480:0.37089,(((DXS_AQUAE/316-481:0.18853,DXS_HAEIN/318-483:0.26387):0.06207,((DXS_MYCLE/312-479:0.19814,(DXS1_STRCO/314-481:0.21001,O50408_MYCTU/210-376:0.33757):0.13899):0.36598,DXS_DEIRA/320-485:0.31264):0.07954):0.06856,(DXS_CHLPN/323-487:0.11838,DXS_CHLTR/319-483:0.26781):0.54849):0.02718):0.05682):0.03975,DXS_SYNLE/317-482:0.24809):0.16789,DXS_RHOCA/319-485:0.24090):0.19895,DXS_ARATH/397-563:0.10494,O81954_CHLRE/402-568:0.14589);