EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF02759 - RUN)
RUN domain
(Pfam reference: accession no. PF02759)
(Interpro reference: accession no. IPR004012)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 257 aa
(ave. pairwise identity: 0.21)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 16.32)
nucleotides
(available for above)
15 sequences @ 771 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 9.35)
amino acids, restricted set
(corresp. to available nt seqs)
15 sequences @ 257 aa
(ave. pairwise identity: 0.21)
New Hampshire format
(total tree length: 14.75)