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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02627 phylogeny
for nucleotide alignment


 
(((((((((((((((((((O30263_ARCFU/32-115,Q8U668_AGRT5/48-130),(O53749_MYCTU/49-133,Q9CB37_MYCLE/51-135)),((Q8GMI8_STRGL/41-122,(((Q88IP0_PSEPK/41-115,Q7NX57_CHRVO/41-125),(Q7MJJ5_VIBVY/55-138,Q7ULD6_RHOBA/54-137)),Q7WJL9_BORBR/42-124)),((((((Q7WNI3_BORBR/39-122,Q872E4_NEUCR/44-109),Q89NA9_BRAJA/36-119),(((Q89RQ0_BRAJA/34-116,O53905_MYCTU/40-123),Q9A3V6_CAUCR/52-136),(Q89SZ5_BRAJA/50-134,(Q89CP9_BRAJA/40-125,(Q82QS6_STRAW/57-140,Q8TN24_METAC/40-121))))),((Q82MM5_STRAW/103-186,((Q8FN71_COREF/14-100,Q8NN44_CORGL/15-100),(((((Q7NXV7_CHRVO/15-94,(Q92XD0_RHIME/12-93,Q987X0_RHILO/12-95)),((Q98K47_RHILO/12-94,((((Q7NMU5_GLOVI/47-129,Q840R0_9GAMM/10-95),Q9I6M1_PSEAE/12-94),(Q89CI6_BRAJA/13-94,Q98L97_RHILO/13-95)),((Q7WHA8_BORBR/12-94,Q89D50_BRAJA/12-94),((Q8UI08_AGRT5/12-94,Q92S80_RHIME/12-94),Q89M11_BRAJA/16-98)))),(Q7VW83_BORPE/12-94,((Q82PT4_STRAW/14-96,Q9FC57_STRCO/14-95),Q9RDI4_STRCO/14-96)))),(Q82A02_STRAW/34-115,((Q82HT0_STRAW/32-114,Q9KZB1_STRCO/28-109),((Q7WN29_BORBR/12-94,Q89PR3_BRAJA/12-94),Q9KZB2_STRCO/10-92)))),(Q93HH4_STRAW/42-128,Q9RJG5_STRCO/31-117)),(Q7P0I8_CHRVO/10-92,Q8FER3_ECOL6/13-95)))),(Q7USN7_RHOBA/41-121,(Q7NI16_GLOVI/40-125,(P96684_BACSU/12-94,(Q8D7H9_VIBVU/12-94,Q8NUW4_STAAW/10-92)))))),((((Q8NMX8_CORGL/269-355,Q8FN18_COREF/270-361),Q89F01_BRAJA/58-143),((Q89XS3_BRAJA/55-139,Q8UJP9_AGRT5/55-127),Q881R7_PSESM/57-141)),(Q8GMC9_STRGL/56-141,Q9RTJ7_DEIRA/77-160))),((((Q7VTI6_BORPE/91-170,Q8XYW1_RALSO/93-173),((Q9ANL0_BRAJA/95-178,(Q8FVW4_BRUSU/94-170,Q83BM5_COXBU/96-175)),((Q82IC5_STRAW/94-177,(AHPD_MYCTU/93-176,Q9X5V1_STRVD/94-172)),Q9A268_CAUCR/95-178))),O06218_MYCTU/45-127),(Q9JUP9_NEIMA/41-123,(((Q7UTX7_RHOBA/162-245,Q8ZSI6_ANASP/44-126),((Q8DUG8_STRMU/42-124,Q8RR45_STRSU/50-134),(Q88GS9_PSEPK/72-155,Q9I1E7_PSEAE/38-118))),Q53427_LEGPN/38-123)))))),(((Q8U670_AGRT5/64-149,Q9LBE9_PSEHY/66-154),O69814_STRCO/47-126),((Q98JY9_RHILO/46-129,(Q8UDR5_AGRT5/44-127,Q8YLD1_ANASP/42-125)),Q89IL8_BRAJA/43-126))),((Q54401_STRLA/19-103,Q89N13_BRAJA/21-105),Q8NLN6_CORGL/20-105)),((((O06800_MYCTU/26-109,((Q89I69_BRAJA/24-107,Q7P1X7_CHRVO/26-109),Q8GQ78_PSEAE/24-107)),(((Q88K69_PSEPK/28-111,Q87XC8_PSESM/23-106),Q7WQ74_BORBR/23-106),(Q9I5X1_PSEAE/24-106,(Y1053_HAEIN/24-107,Q9JTG8_NEIMA/24-106)))),(Q8PBZ0_XANCP/31-114,Q9X1V5_THEMA/22-105)),(YAC7_ALCEU/24-107,Q8DKG6_SYNEL/35-118))),((Q984R0_RHILO/14-98,Q98BX3_RHILO/57-141),YCO4_PARDE/21-104)),Q89PM8_BRAJA/34-118),((Q978P3_THEVO/22-105,Q9HLI4_THEAC/22-105),(Q81CE2_BACCR/28-111,(O32166_BACSU/32-115,Q9K796_BACHD/28-111)))),(Q8PUU3_METMA/18-101,Q8PYV8_METMA/9-92)),((Q9WYF2_THEMA/12-95,O27018_METTH/13-96),Q8PZJ3_METMA/27-110)),(Q8PZ63_METMA/30-113,Q8PZX1_METMA/20-103)),(Q8PYL6_METMA/19-102,Q8RCV6_THETN/21-104)),(Q8EMR2_OCEIH/26-109,Q8EMR2_OCEIH/135-218)),((Q8TXW6_METKA/29-113,(O68251_DEHMU/42-118,O29899_ARCFU/36-119)),(O26169_METTH/26-109,Q8PYE4_METMA/43-127))),((((O74758_SCHPO/128-205,YJ81_YEAST/199-283),(((Q7VG56_HELHP/77-162,(DC4C_ACIAD/35-119,((Q87H24_VIBPA/33-118,(O26336_METTH/31-115,((((((Q8FQN1_COREF/33-119,P71826_MYCTU/26-111),(Q84H85_9MICC/39-123,Q828B2_STRAW/38-123)),(((Q8A7Y1_BACTN/311-396,(Q7VG63_HELHP/216-301,Q8RN34_CAMJE/39-124)),Q9RVP9_DEIRA/30-114),((Q87FG9_VIBPA/158-243,Q8A8P6_BACTN/142-227),Q9PCL2_XYLFA/167-252))),((Q9KXX7_STRCO/38-123,(((((((Q89LE4_BRAJA/50-134,(Q8Y1Q8_RALSO/21-105,Q930A6_RHIME/41-125)),Q881M4_PSESM/43-127),Q8Y1Q8_RALSO/150-234),((Q89LE4_BRAJA/177-261,Q881M4_PSESM/170-254),Q930A6_RHIME/168-252)),((Q7WPY0_BORBR/32-117,Q8CL33_YERPE/30-114),(Q7NSY1_CHRVO/13-97,Q8XQ14_RALSO/17-101))),((((Q8E1D2_STRA5/17-102,((Q88TS1_LACPL/17-102,Q8EWL7_MYCPE/18-103),Q81RU7_BACAN/19-103)),Q9CFE3_LACLA/16-101),Q8DV36_STRMU/17-102),Q8NRJ9_CORGL/17-103)),(Q930M4_RHIME/170-255,Q8UH27_AGRT5/28-112))),(((Q9RV26_DEIRA/68-152,((Q8FW21_BRUSU/42-126,Q9KX42_9RHIZ/39-123),(Q9L5A7_9PROT/34-118,Q9L5B1_9RHOB/33-117))),(O67982_RHOOP/297-381,Q8FN50_COREF/40-124)),((((Q8KL33_RHIET/67-151,(Q8KL13_RHIET/51-135,Q97UW0_SULSO/43-128)),(((Q8D1N8_YERPE/49-133,Q88GS0_PSEPK/34-118),((Q7WNR4_BORBR/34-118,Q8UK98_AGRT5/34-118),Q89UN1_BRAJA/34-118)),Q87WR5_PSESM/34-118)),((Q7WPN1_BORBR/34-118,Q7WNG4_BORBR/34-118),Q7W0B6_BORPE/40-124)),(((Q88N35_PSEPK/35-119,Q8XX67_RALSO/35-119),Q8PDG7_XANCP/35-119),((O86608_STRCO/355-439,Q82MF4_STRAW/285-369),(Q89IH0_BRAJA/35-120,Q9A5N6_CAUCR/302-387))))))),((YNQ6_PARDE/40-126,Q52659_RHOCA/40-126),YNQ5_PARDE/35-121)),(Q930M4_RHIME/49-134,Q930M4_RHIME/308-395)))),Q8EKK9_SHEON/33-118))),Q9CE69_LACLA/31-116),(Q87FG9_VIBPA/24-106,((Q8A7Y1_BACTN/178-261,Q8TTM1_METAC/27-111),Q7VG63_HELHP/82-166)))),Q7UPD1_RHOBA/39-122),((Q8Q0J3_METMA/14-97,(Q8UGQ2_AGRT5/19-101,Q8Y972_LISMO/15-97)),P73604_SYNY3/23-107))),(Y1511_METJA/18-101,(Y742_METJA/19-103,O26787_METTH/36-120))),(Q8PSC4_METMA/27-113,Q8TP59_METAC/27-113)),Q8PT04_METMA/24-107,Q8TNJ6_METAC/14-97);
(((((((((((((((((((O30263_ARCFU/32-115:0.70280,Q8U668_AGRT5/48-130:0.88307):0.20803,(O53749_MYCTU/49-133:0.21503,Q9CB37_MYCLE/51-135:0.45176):0.73521):0.09897,((Q8GMI8_STRGL/41-122:0.48162,(((Q88IP0_PSEPK/41-115:0.43713,Q7NX57_CHRVO/41-125:0.16143):0.07270,(Q7MJJ5_VIBVY/55-138:0.42233,Q7ULD6_RHOBA/54-137:0.31249):0.15711):0.13567,Q7WJL9_BORBR/42-124:0.40201):0.05091):0.07359,((((((Q7WNI3_BORBR/39-122:0.14248,Q872E4_NEUCR/44-109:0.48337):0.15227,Q89NA9_BRAJA/36-119:0.39031):0.08250,(((Q89RQ0_BRAJA/34-116:0.35775,O53905_MYCTU/40-123:0.39940):0.07710,Q9A3V6_CAUCR/52-136:0.39872):0.15345,(Q89SZ5_BRAJA/50-134:0.54529,(Q89CP9_BRAJA/40-125:0.55462,(Q82QS6_STRAW/57-140:0.36856,Q8TN24_METAC/40-121:0.43903):0.09361):0.13343):0.02502):0.04688):0.11313,((Q82MM5_STRAW/103-186:0.58135,((Q8FN71_COREF/14-100:0.09556,Q8NN44_CORGL/15-100:0.37330):0.31861,(((((Q7NXV7_CHRVO/15-94:0.19805,(Q92XD0_RHIME/12-93:0.16123,Q987X0_RHILO/12-95:0.17585):0.14599):0.06161,((Q98K47_RHILO/12-94:0.22917,((((Q7NMU5_GLOVI/47-129:0.24243,Q840R0_9GAMM/10-95:0.32965):0.06533,Q9I6M1_PSEAE/12-94:0.21540):0.04433,(Q89CI6_BRAJA/13-94:0.18286,Q98L97_RHILO/13-95:0.27252):0.15525):0.03868,((Q7WHA8_BORBR/12-94:0.19769,Q89D50_BRAJA/12-94:0.15746):0.02926,((Q8UI08_AGRT5/12-94:0.27545,Q92S80_RHIME/12-94:0.14165):0.11390,Q89M11_BRAJA/16-98:0.33282):0.07612):0.02644):0.03124):0.03841,(Q7VW83_BORPE/12-94:0.23926,((Q82PT4_STRAW/14-96:0.18316,Q9FC57_STRCO/14-95:0.10072):0.08124,Q9RDI4_STRCO/14-96:0.18009):0.17339):0.11394):0.00997):0.06442,(Q82A02_STRAW/34-115:0.17782,((Q82HT0_STRAW/32-114:0.15185,Q9KZB1_STRCO/28-109:0.06786):0.10838,((Q7WN29_BORBR/12-94:0.13357,Q89PR3_BRAJA/12-94:0.17483):0.30906,Q9KZB2_STRCO/10-92:0.17774):0.09784):0.04526):0.17440):0.04112,(Q93HH4_STRAW/42-128:0.16323,Q9RJG5_STRCO/31-117:0.12769):0.18331):0.05398,(Q7P0I8_CHRVO/10-92:0.31775,Q8FER3_ECOL6/13-95:0.33490):0.12783):0.02509):0.04350):0.06938,(Q7USN7_RHOBA/41-121:0.52905,(Q7NI16_GLOVI/40-125:0.40177,(P96684_BACSU/12-94:0.31305,(Q8D7H9_VIBVU/12-94:0.40076,Q8NUW4_STAAW/10-92:0.50226):0.06900):0.19961):0.07573):0.17711):0.06916):0.07694,((((Q8NMX8_CORGL/269-355:0.35454,Q8FN18_COREF/270-361:0.19040):0.12531,Q89F01_BRAJA/58-143:0.19053):0.18682,((Q89XS3_BRAJA/55-139:0.24719,Q8UJP9_AGRT5/55-127:0.38875):0.09316,Q881R7_PSESM/57-141:0.32069):0.07408):0.20240,(Q8GMC9_STRGL/56-141:0.47428,Q9RTJ7_DEIRA/77-160:0.42064):0.05668):0.18086):0.12682,((((Q7VTI6_BORPE/91-170:0.14884,Q8XYW1_RALSO/93-173:0.20492):0.22122,((Q9ANL0_BRAJA/95-178:0.26964,(Q8FVW4_BRUSU/94-170:0.13729,Q83BM5_COXBU/96-175:0.48210):0.09082):0.06870,((Q82IC5_STRAW/94-177:0.07937,(AHPD_MYCTU/93-176:0.31563,Q9X5V1_STRVD/94-172:0.23040):0.12820):0.06404,Q9A268_CAUCR/95-178:0.45785):0.06415):0.13527):0.29062,O06218_MYCTU/45-127:0.72158):0.03274,(Q9JUP9_NEIMA/41-123:0.44243,(((Q7UTX7_RHOBA/162-245:0.23684,Q8ZSI6_ANASP/44-126:0.55771):0.11008,((Q8DUG8_STRMU/42-124:0.50422,Q8RR45_STRSU/50-134:0.13806):0.19518,(Q88GS9_PSEPK/72-155:0.09409,Q9I1E7_PSEAE/38-118:0.23172):0.29996):0.05976):0.12043,Q53427_LEGPN/38-123:0.66517):0.22973):0.28647):0.04563):0.07935):0.01821):0.04584,(((Q8U670_AGRT5/64-149:0.63320,Q9LBE9_PSEHY/66-154:0.44890):0.11938,O69814_STRCO/47-126:0.56391):0.06752,((Q98JY9_RHILO/46-129:0.18273,(Q8UDR5_AGRT5/44-127:0.18955,Q8YLD1_ANASP/42-125:0.47428):0.08297):0.13846,Q89IL8_BRAJA/43-126:0.19198):0.44037):0.08866):0.09367,((Q54401_STRLA/19-103:0.20241,Q89N13_BRAJA/21-105:0.26195):0.07590,Q8NLN6_CORGL/20-105:0.30699):0.20776):0.07460,((((O06800_MYCTU/26-109:0.45268,((Q89I69_BRAJA/24-107:0.16554,Q7P1X7_CHRVO/26-109:0.15141):0.04697,Q8GQ78_PSEAE/24-107:0.17013):0.08352):0.06768,(((Q88K69_PSEPK/28-111:0.16295,Q87XC8_PSESM/23-106:0.27644):0.07652,Q7WQ74_BORBR/23-106:0.19854):0.07361,(Q9I5X1_PSEAE/24-106:0.09978,(Y1053_HAEIN/24-107:0.34654,Q9JTG8_NEIMA/24-106:0.07919):0.17587):0.16596):0.12656):0.00053,(Q8PBZ0_XANCP/31-114:0.15790,Q9X1V5_THEMA/22-105:0.35427):0.36248):0.04437,(YAC7_ALCEU/24-107:0.39865,Q8DKG6_SYNEL/35-118:0.31900):0.10172):0.06177):0.08365,((Q984R0_RHILO/14-98:0.26296,Q98BX3_RHILO/57-141:0.13230):0.27483,YCO4_PARDE/21-104:0.34694):0.06832):0.09200,Q89PM8_BRAJA/34-118:0.75936):0.23999,((Q978P3_THEVO/22-105:0.16617,Q9HLI4_THEAC/22-105:0.16990):0.25665,(Q81CE2_BACCR/28-111:0.16024,(O32166_BACSU/32-115:0.25201,Q9K796_BACHD/28-111:0.19331):0.07956):0.27568):0.08403):0.07739,(Q8PUU3_METMA/18-101:0.25148,Q8PYV8_METMA/9-92:0.13110):0.30952):0.08747,((Q9WYF2_THEMA/12-95:0.43692,O27018_METTH/13-96:0.57405):0.07564,Q8PZJ3_METMA/27-110:0.51502):0.08176):0.08466,(Q8PZ63_METMA/30-113:0.19733,Q8PZX1_METMA/20-103:0.16296):0.38615):0.01250,(Q8PYL6_METMA/19-102:0.42089,Q8RCV6_THETN/21-104:0.27855):0.10055):0.09488,(Q8EMR2_OCEIH/26-109:0.23878,Q8EMR2_OCEIH/135-218:0.21431):0.25859):0.06724,((Q8TXW6_METKA/29-113:0.84801,(O68251_DEHMU/42-118:0.54412,O29899_ARCFU/36-119:0.57299):0.06888):0.10102,(O26169_METTH/26-109:0.40503,Q8PYE4_METMA/43-127:0.46332):0.16981):0.09739):0.08471,((((O74758_SCHPO/128-205:0.32429,YJ81_YEAST/199-283:0.43204)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