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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02559 phylogeny
for restricted amino acid alignment


 
((((((((((((((((Q8K8Z6_STRP3/459-556,Q97TD0_STRPN/488-585),Q9CJI0_LACLA/484-581),(Q8NXZ6_STAAW/494-591,((MFD_BACSU/499-596,Q9KGJ2_BACHD/500-597),(Q92F61_LISIN/500-597,O85234_LACSK/496-593)))),(Q8R759_THETN/500-597,Q9RU62_DEIRA/374-471)),(((MFD_BORBU/458-555,Q9X1G2_THEMA/249-344),O83364_TREPA/475-572),(Q8XHJ9_CLOPE/494-591,Q97E98_CLOAB/501-598))),(((Q8RH90_FUSNN/334-427,(MFD_HELPY/360-457,Q9PNK9_CAMJE/343-440)),Q8KEN4_CHLTE/423-520),((((((MFD_HAEIN/478-575,Q8ZQ01_SALTY/476-573),Q9KQW2_VIBCH/481-578),Q9HZK3_PSEAE/477-574),Q8PIN7_XANAC/484-581),((Q8XYW4_RALSO/491-588,Q9JU50_NEIMA/626-723),MFD_BUCAI/141-238)),(MFD_RICPR/455-549,(MFD_MYXXA/531-628,((Q8UEH9_AGRT5/497-593,(Q8YC44_BRUME/502-598,Q98LX9_RHILO/495-591)),Q9A782_CAUCR/482-579)))))),((MFD_SYNY3/526-618,Q8YLT1_ANASP/512-608),((MFD_MYCTU/517-621,Q8NRS9_CORGL/499-604),Q9F2P1_STRCO/506-607))),(O84753_CHLTR/434-529,Q9SGA4_ARATH/140-242)),Q9RRL6_DEIRA/8-118),Q8XNS3_CLOPE/1-115),(Q92JN7_RICCN/12-122,(Q8YJ08_BRUME/30-140,Q9AAE8_CAUCR/25-135))),(O53568_MYCTU/2-112,Q8NMB7_CORGL/2-112)),(O83524_TREPA/35-145,Q50887_MYXXA/9-119)),O51330_BORBU/2-110),Q9KD36_BACHD/1-110),P96659_BACSU/1-111,Q9K600_BACHD/1-111);
((((((((((((((((Q8K8Z6_STRP3/459-556:0.16761,Q97TD0_STRPN/488-585:0.17825):0.13394,Q9CJI0_LACLA/484-581:0.20468):0.22916,(Q8NXZ6_STAAW/494-591:0.30848,((MFD_BACSU/499-596:0.09664,Q9KGJ2_BACHD/500-597:0.15181):0.11329,(Q92F61_LISIN/500-597:0.12219,O85234_LACSK/496-593:0.27658):0.07519):0.04222):0.02166):0.06253,(Q8R759_THETN/500-597:0.21730,Q9RU62_DEIRA/374-471:0.76035):0.17799):0.08097,(((MFD_BORBU/458-555:0.30252,Q9X1G2_THEMA/249-344:0.80423):0.10487,O83364_TREPA/475-572:0.44481):0.25856,(Q8XHJ9_CLOPE/494-591:0.13454,Q97E98_CLOAB/501-598:0.16062):0.08765):0.10308):0.11122,(((Q8RH90_FUSNN/334-427:0.66891,(MFD_HELPY/360-457:0.43467,Q9PNK9_CAMJE/343-440:0.27899):0.22368):0.18363,Q8KEN4_CHLTE/423-520:0.52075):0.08339,((((((MFD_HAEIN/478-575:0.18910,Q8ZQ01_SALTY/476-573:0.10558):0.09407,Q9KQW2_VIBCH/481-578:0.13996):0.11453,Q9HZK3_PSEAE/477-574:0.23991):0.07532,Q8PIN7_XANAC/484-581:0.23368):0.08186,((Q8XYW4_RALSO/491-588:0.28282,Q9JU50_NEIMA/626-723:0.21812):0.14538,MFD_BUCAI/141-238:0.52582):0.03695):0.34449,(MFD_RICPR/455-549:0.46932,(MFD_MYXXA/531-628:0.55189,((Q8UEH9_AGRT5/497-593:0.14380,(Q8YC44_BRUME/502-598:0.16333,Q98LX9_RHILO/495-591:0.05671):0.08919):0.17483,Q9A782_CAUCR/482-579:0.28290):0.16331):0.11046):0.10403):0.11835):0.15459):0.20496,((MFD_SYNY3/526-618:0.17747,Q8YLT1_ANASP/512-608:0.20628):0.49909,((MFD_MYCTU/517-621:0.13891,Q8NRS9_CORGL/499-604:0.21763):0.19136,Q9F2P1_STRCO/506-607:0.23210):0.16708):0.09242):0.00000,(O84753_CHLTR/434-529:0.79323,Q9SGA4_ARATH/140-242:1.18356):0.09077):1.31714,Q9RRL6_DEIRA/8-118:1.06816):0.41655,Q8XNS3_CLOPE/1-115:1.18520):0.08142,(Q92JN7_RICCN/12-122:0.31414,(Q8YJ08_BRUME/30-140:0.30256,Q9AAE8_CAUCR/25-135:0.19383):0.22290):0.38418):0.11776,(O53568_MYCTU/2-112:0.11821,Q8NMB7_CORGL/2-112:0.22834):0.43338):0.16786,(O83524_TREPA/35-145:0.48056,Q50887_MYXXA/9-119:0.78036):0.16691):0.04757,O51330_BORBU/2-110:0.86991):0.23527,Q9KD36_BACHD/1-110:0.56847):0.40038,P96659_BACSU/1-111:0.16742,Q9K600_BACHD/1-111:0.10028);