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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02559 phylogeny
for amino acid alignment


 
((((((((((((((Q8R759_THETN/500-597,Q9RU62_DEIRA/374-471),(((Q8K8Z6_STRP3/459-556,Q97TD0_STRPN/488-585),Q9CJI0_LACLA/484-581),(Q8NXZ6_STAAW/494-591,((MFD_BACSU/499-596,Q9KGJ2_BACHD/500-597),(Q92F61_LISIN/500-597,O85234_LACSK/496-593))))),(((MFD_BORBU/458-555,Q9X1G2_THEMA/249-344),O83364_TREPA/475-572),(Q8XHJ9_CLOPE/494-591,Q97E98_CLOAB/501-598))),(((Q8RH90_FUSNN/334-427,(MFD_HELPY/360-457,Q9PNK9_CAMJE/343-440)),Q8KEN4_CHLTE/423-520),(MFD_RICPR/455-549,(((((((MFD_HAEIN/478-575,Q8ZQ01_SALTY/476-573),Q9KQW2_VIBCH/481-578),Q9HZK3_PSEAE/477-574),Q8PIN7_XANAC/484-581),((Q8XYW4_RALSO/491-588,Q9JU50_NEIMA/626-723),MFD_BUCAI/141-238)),MFD_MYXXA/531-628),(((Q8UEH9_AGRT5/497-593,(Q8YC44_BRUME/502-598,Q98LX9_RHILO/495-591)),Q9A782_CAUCR/482-579),Q9EZA3_ZYMMO/473-569))))),((MFD_SYNY3/526-618,Q8YLT1_ANASP/512-608),((MFD_MYCTU/517-621,Q8NRS9_CORGL/499-604),Q9F2P1_STRCO/506-607))),(O84753_CHLTR/434-529,Q9SGA4_ARATH/140-242)),Q9RRL6_DEIRA/8-118),Q8XNS3_CLOPE/1-115),(Q92JN7_RICCN/12-122,(Q8YJ08_BRUME/30-140,Q9AAE8_CAUCR/25-135))),(O53568_MYCTU/2-112,Q8NMB7_CORGL/2-112)),(O83524_TREPA/35-145,Q50887_MYXXA/9-119)),O51330_BORBU/2-110),Q9KD36_BACHD/1-110),P96659_BACSU/1-111,Q9K600_BACHD/1-111);
((((((((((((((Q8R759_THETN/500-597:0.21608,Q9RU62_DEIRA/374-471:0.75796):0.17590,(((Q8K8Z6_STRP3/459-556:0.16875,Q97TD0_STRPN/488-585:0.17683):0.13312,Q9CJI0_LACLA/484-581:0.20494):0.22862,(Q8NXZ6_STAAW/494-591:0.30798,((MFD_BACSU/499-596:0.09584,Q9KGJ2_BACHD/500-597:0.15239):0.11236,(Q92F61_LISIN/500-597:0.12225,O85234_LACSK/496-593:0.27642):0.07619):0.04233):0.02236):0.06382):0.08427,(((MFD_BORBU/458-555:0.30160,Q9X1G2_THEMA/249-344:0.80173):0.10294,O83364_TREPA/475-572:0.44549):0.25732,(Q8XHJ9_CLOPE/494-591:0.13342,Q97E98_CLOAB/501-598:0.16084):0.08759):0.09863):0.08786,(((Q8RH90_FUSNN/334-427:0.66179,(MFD_HELPY/360-457:0.43070,Q9PNK9_CAMJE/343-440:0.28232):0.22001):0.17719,Q8KEN4_CHLTE/423-520:0.51786):0.08450,(MFD_RICPR/455-549:0.48843,(((((((MFD_HAEIN/478-575:0.19677,Q8ZQ01_SALTY/476-573:0.09613):0.09353,Q9KQW2_VIBCH/481-578:0.14003):0.11564,Q9HZK3_PSEAE/477-574:0.23950):0.07203,Q8PIN7_XANAC/484-581:0.24484):0.08905,((Q8XYW4_RALSO/491-588:0.27048,Q9JU50_NEIMA/626-723:0.22503):0.14755,MFD_BUCAI/141-238:0.52555):0.03911):0.29929,MFD_MYXXA/531-628:0.47146):0.12110,(((Q8UEH9_AGRT5/497-593:0.14378,(Q8YC44_BRUME/502-598:0.16214,Q98LX9_RHILO/495-591:0.05748):0.08634):0.17375,Q9A782_CAUCR/482-579:0.28198):0.03355,Q9EZA3_ZYMMO/473-569:0.72132):0.17147):0.09708):0.16605):0.17016):0.22492,((MFD_SYNY3/526-618:0.17897,Q8YLT1_ANASP/512-608:0.20430):0.49377,((MFD_MYCTU/517-621:0.13829,Q8NRS9_CORGL/499-604:0.21761):0.19474,Q9F2P1_STRCO/506-607:0.22806):0.17047):0.08734):0.00000,(O84753_CHLTR/434-529:0.79356,Q9SGA4_ARATH/140-242:1.17461):0.09787):1.31314,Q9RRL6_DEIRA/8-118:1.06087):0.41971,Q8XNS3_CLOPE/1-115:1.18533):0.07955,(Q92JN7_RICCN/12-122:0.31462,(Q8YJ08_BRUME/30-140:0.30148,Q9AAE8_CAUCR/25-135:0.19390):0.22167):0.38460):0.11590,(O53568_MYCTU/2-112:0.11830,Q8NMB7_CORGL/2-112:0.22778):0.43392):0.16669,(O83524_TREPA/35-145:0.47898,Q50887_MYXXA/9-119:0.77941):0.16706):0.04749,O51330_BORBU/2-110:0.86906):0.23330,Q9KD36_BACHD/1-110:0.56782):0.39939,P96659_BACSU/1-111:0.16788,Q9K600_BACHD/1-111:0.09942);