EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02499 alignment
(10 sequences with 1122 bp)


VTER_VZVD/382-746 TTAAATCAAACCAATTGTAAAATTATTTTTGTTTCATCAACAAATACCGGAAAAGCAAGTACAAGTTTTTTGTATAACTTACGTGGATCGTCGGATCAGTTGTTAAACGTTGTTACATATGTATGCGACGATCACATGCCGCGTGTTTTAGCACATAGCGATGTCACAGCTTGTTCGTGTTATGTATTAAATAAGCCGGTTTTCATCACAATGGATGGAGCCATGCGGCGCACTGCAGATTTATTTATGGCCGACTCCTTCGTGCAGGAAATTGTAGGTGGGCGTAAACAGaattctgggGGTGTGGGGTTTGACCGGCCA------TTATTTACAAAAACTGCCCGTGAGAGGTTTATTTTATATCGGCCGTCAACCGTTGCG------AATTGTGCTATATTATCGTCAGTGTTGTACGTTTACGTAGACCCTGCATTTACCTCAAATACACGAGCGTCTGGTACTGGTGTAGCGATTGTTGGTCGTTATAAGTCGGAT---------TGGATTATATTTGGATTGGAGCACTTTTTTCTTAGAGCTTTAACTGGCACGTCTTCCAGTGAGATAGGGCGTTGCGTTACTCAATGCTTAGGCCACATACTCGCTTTACACCCCAATACATTTACAAACGTACACGTTTCTATAGAGGGAAACAGCAGCCAGGATTCTGCAGTTGCCATATCGTTGGCTATAGCACAACAGTTTGCTGTCCTCGAAAAGGGAAACGTGCTATCTTCCGCTCCA...---GTGTTACTGTTTTATCATTCCATACCTCCCGGATGTAGCGTGGCGTACCCTTTTTTTTTATTACAAAAACAAAAAACGCCGGCCGTAGACTATTTTGTTAAACGATTTAACTCCGGAAATATAATAGCCTCACAGGAGCTTGTATCCCTAACAGTAAAGTTAGGTGTAGACCCCGTGGAGTATCTATGTAAACAGTTGGATAACCTGACAGAGGTAATTAAAGGCggtatgggtAATCTAGACACAAAAACTTACACGGGTAAAggtACCACGGGAACAATGTCAGATGATCTGATGGTTGCATTAATTATGTCCGTGTATATTGGCAGTTCATGTATACCGGATTCCGTGTTTATGCCTATT
Q65567_9ALPH/371-728 CTGAACCAGGCCAGCTGCAAGATAATCTTCGTCTCCTCGACCAACACCGGCAAGGCCAGCACGAGCTTCCTCTACAACCTCAAGGGCGCCTCTGACGGGCTGCTCAACGTGGTGACGTATATATGCAACGAGCACACGCCGCGTGTGGCGGCGCACGGCGGCGCCACCGCGTGCTCGTGTTACGTCCTCAACAAGCCCGTCTTCATCACCATGGACGCCGCCGCGCGCAACACCGCCGAGACCTTCCTGCCCAACTCGTTCATGCAGGAGATCATTGGCGGCGGCGAGGTC.........---GCGCGCCGCGCCGAGCCCGCGGCCGTGTTCACCCGCGCGGCGGGCGAGCAGTTTCTGCTCTATCGGCCATCCACGGCGGCG------GCCCGCGGCCCGTGGCCCGAGCGGCTCTACATGTACATCGACCCGGCCTTCACGAGCAACGCCCGCGCCTCCGGCTCCGGCATCGCCGTCGTGGGGCGGCATCGCGGCAGC---------TGGCTGGTGCTGGGCCTGGAGCACTTTTTTTTGCCGGCGCTCACGGGCAGCTCGGCCGCCGAGATCGCGCGGTGCGCCGTGCGCTGCTTCGCGCAGGTCATGGCCGTGCACCGGCGCCGCCTCGACGGCCTCTTTGTCGCCGTCGAGGGCAACAGCAGCCAGGACTCCGCGGTCGCGATCGCGCTCGGCGTCCGGCGCGAGCTCGACTCGCTGGCCGCGTCCGGTGCCGTGCCCATGCCCGCC...---GAGACGCGCTTTTACCACTGCCGCCCGCCCGGGAGCGCGGTGGCCTACCCCTTTTTTTTGCTGCAGAAGCAGAAGACGGCCGCCTTTGACCACTTCATCCGCTTATTCAACTCCGGGCGCGTGGTTGCCTCCCAGGACCTGGCCTCGCTGACCGTGCGCCTGCAGACAGACCCCGTGGAGTACCTCTTTGAGCAACTGCAAAACCTAACCGAGAGCACCGCCGGC.........CCCGGCGGGGCCCGGGCCTTCTCGGGCAAG...---CGCCGGGGCGCCGCCGACGATCTAATGGTGGCGCTAGTGATGGCCGTGTTCGTGGGCAGCCTCCCGCCCACCGACGGCGCCTTCTGCCCGCTG
VTER_HHV11/373-731 CTCAACCAGGCCAACTGCAAGATTATCTTCGTGTCGTCCACCAACACCGGGAAGGCCAGTACGAGCTTTTTGTACAACCTCCGCGGGGCCGCAGACGAGCTTCTCAACGTGGTGACCTATATATGCGATGATCACATGCCGAGGGTGGTGACGCACACAAACGCCACGGCCTGTTCTTGTTATATCCTCAACAAGCCCGTTTTCATCACGATGGACGGGGCGGTTCGCCGGACCGCCGATTTGTTTCTGGCCGATTCCTTCATGCAGGAGATCATCGGGGGCCAGGCCAGG.........GAGACCGGCGACGACCGGCCC------GTTCTGACCAAGTCTGCGGGGGAGCGGTTTCTGTTGTACCGCCCCTCGACCACCACC------AACAGCGGCCTCATGGCCCCCGATTTGTACGTGTACGTGGATCCCGCGTTCACGGCCAACACCCGAGCCTCCGGGACCGGCGTCGCTGTCGTCGGGCGGTACCGCGACGAT---------TATATCATCTTCGCCCTGGAGCACTTTTTTCTCCGCGCGCTCACGGGCTCGGCCCCCGCCGACATCGCCCGCTGCGTCGTCCACAGTCTGACGCAGGTCCTGGCCCTGCATCCCGGGGCGTTTCGCGGCGTCCGGGTGGCGGTCGAGGGAAATAGCAGCCAGGACTCGGCCGTCGCCATCGCCACGCACGTGCACACAGAGATGCACCGCCTACTGGCCTCGGAGGGGGCCGACGCGGGCTCGggcCCCGAGCTTCTCTTCTACCACTGCGAGCCTCCCGGGAGCGCGGTGCTGTACCCCTTTTTCCTGCTCAACAAACAGAAGACGCCCGCCTTTGAACACTTTATTAAAAAGTTTAACTCCGGGGGCGTCATGGCCTCCCAGGAGATCGTTTCCGCGACGGTGCGCCTGCAGACCGACCCGGTCGAGTATCTGCTCGAGCAGCTAAATAACCTCACCGAAACCGTCTCCCCC.........AACACTGACGTCCGTACGTATTCCGGAAAA...---CGGAACGGCGCCTCGGATGACCTTATGGTCGCCGTCATTATGGCCATCTACCTCGCGGCCCAGGCCGGACCTCCGCACACATTCGCTCCTATC
VTER_HCMVA/326-674 CTGGCCCAGAATACCACCAAGATCATCTTCATATCGTCCACCAACACTACCAGTGACTCCACGTGTTTCTTGACGCGCCTTAACAATGCGCCCTTTGACATGCTCAACGTGGTCTCTTACGTGTGCGAAGAGCACCTGCACAGCTTCACGGAGAAGGGCGACGCCACGGCGTGTCCTTGCTACCGACTGCACAAGCCCACCTTCATCAGCCTCAACTCGCAAGTGCGCAAGACGGCCAACATGTTTATGCCGGGCGCTTTCATGGACGAGATCATCGGCGGTACCAATAAA.........ATCTCGCAGAACACC------GTGCTCATCACG---GACCAGAGCCGCGAAGAGTTCGATATTTTGCGTTACAGCACGCTCAACACCAACGCCTACGATTATTTCGGCAAGACGCTTTACGTGTATCTGGACCCGGCCTTCACCACCAACCGCAAGGCCTCGGGCACGGGCGTGGCGGCCGTAGGCGCCTACCGACACCAG---------TTTCTCATTTACGGCCTAGAGCATTTCTTTTTGCGCGACCTCTCCGAGAGTTCTGAGGTAGCCATCGCCGAGTGCGCGGCGCACATGATCATCTCGGTGCTGAGCCTGCACCCT---TACCTGGACGAACTGCGCATCGCCGTGGAGGGCAACACCAACCAGGCGGCGGCCGTGCGCATCGCCTGCCTCATCCGACAGAGCGTGCAGAGCAGCACGCTC------------------------...ATCCGCGTGCTCTTCTACCACACGCCCGACCAGAAC---CACATCGAACAGCCCTTCTACCTCATGGGCCGCGACAAGGCGCTGGCCGTGGAACAGTTCATCTCGCGTTTCAACTCGGGCTACATCAAAGCCTCGCAAGAGCTCGTCTCCTACACCATCAAGCTGAGCCACGACCCCATCGAGTATCTTCTGGAGCAGATTCAGAACCTGCACCGCGTCACGCTGGCC.........GAAGGCACGACGGCGCGTTACTCGGCCAAG...CGCCAGAATCGTATCTCGGACGATCTTATCATCGCCGTCATCATGGCCACCTACCTGTGTGACGATATACACGCC---ATCCGTTTCAGGGTCAGC
VTER_SHV21/333-680 ATGCTACAAAAAGATGCTAAGCTGATATTTATATCATCAGTTAATTCAGGAGACAGAGCTACTAGTTTTTTATTTAATTTAAAAAATGCTTCTGAAAAAATGTTAAACATAGTTAACTATATTTGTCCTGACCACAAAGATGATTTTAGTTTACAAGATTCATTAATTTCTTGCCCGTGTTATAAACTGTACATTCCGACATACATAACTATTGATGAGACTATCAAAAATACTACAAATCTCTTCTTAGATGGTGCTTTTACTACAGAACTAATGGGAGACATGTCTGGT.........ATTTCAAAAAGTAAC---ATGCACAAAGTTATTAGCGAGATGGCTATAACTCAATTTGATCTATGTAGGGCAGATACAACTAAGCCAGAAATAACTCAATGCTTAAACTCAACAATGTACATATATATAGATCCTGCTTATACAAACAACTCAGAAGCATCTGGCACTGGAATAGGAGCTATATTGACTTTTAAAAACAACTCTAGCAAATGTATAATTGTTGGGATGGAGCATTATTTTTTGAAAGACTTGACTGGGACAGCTACTTATCAAATAGCATCTTGTGCATGTTCTCTTATAAGAGCATCTTTAGTGCTGTATCCT---CATATACAGTGTGTACATGTAGCTGTTGAAGGAAACAGCAGCCAAGACTCAGCAGTTGCAATTTCTACACTTATAAACGAATGTTCTCCA------------------------------------...ATTAAAGTCTACTTTATCCATTATAAAGATAAAACGACTACAATGCAGTGGCCAATATATATGCTAGGAGCAGAAAAATCTATAGCATTTGAGTCTTTCATATATGCTATAAACTCTGGAACTATAAGTGCTAGCCAAAGTATAATTTCTAACACCATAAAACTTTCTTTTGATCCTATTTCTTATCTCATTGAACAAATCAGATCAATCAGGTGTTACCCATTAAGA.........GATGGTAGTCACACA---TATTGTGCTAAG...AAAAGAACA---GTATCAGATGATGTTTTAGTAGCAGTTGTGATGGCTTATTTTTTTGCTACCTCAAACAAA------CACATTTTCAAACCACTT
Q66632_9GAMA/1-348 ATGCTGCAAAAGGATGCCAAGATCATTTTCATCTCATCGGTCAACTCCTCCGACCAGACCACCAGCTTCCTGTACAACCTCAAGAACGCCAAGGAAAAAATGCTCAACGTGGTCAACTACGTGTGCCCCCAGCACAGGGAGGACTTTAGCCTGCAGGAGTCGGTGGTCTCGTGCCCCTGCTACCGCCTACACATCCCCACCTACATCGCGATCGATGAGAACATCAAGGACACCACCAACCTGTTTATGGAGGGGGCCTTCACCACCGAGCTCATGGGCGACGGGGCCGCC.........GCGACCACCCAGACCAACATGCACAAGGTGGTGGGCGAGCCCGCGCTCGTCCAGTTTGACCTGTGCCGCGTGGACACGGGCTCCCCCGAGGCCCAGCGCGGCCTGAACCCCACCCTGTTCCTGTACGTGGACCCCGCCTACACCAACAACACGGAGGCCTCGGGCACGGGCATGGGGGCGGTGGTCTCTATGAAAAACAGC---GATAGGTGCGTGGTGGTGGGGGTGGAGCACTTTTTCCTGAAGGAGCTCACGGGGGCCTCCTCGCTGCAGATCGCCAGCTGCGCGGCGGCCCTCATCCGCTCGCTCGCGACGCTGCACCCC---TTCGTGAGGGAGGCGCACGTGGCCATAGAGGGCAACAGCAGCCAGGACTCTGCGGTGGCCATCGCCACCCTGCTGCACGAGCGCAGCCCC------------------------------------...CTGCCGGTCAAGTTCCTGCACCACGCCGACAAGGCCACGGGGGTGCAGTGGCCCATGTACATCCTGGGGGCCGAGAAGGCGCGCGCCTTCGAGACCTTCATCTACGCGCTCAACTCCAACACCCTGAGCTGCGGCCAGGCCATCGTCTCCAACACCATCAAGCTGTCATTCGACCCGGTGGCCTACCTGATAGAGCAGATACGGGCCATCAAGTGCTACCCGCTCAAG.........GACGGCACCGTGTCC---TACTGCGCCAAG...CACAAGGGC---GGCTCGGACGACACCCTGGTGGCGGTGGTCATGGCGCACTACTTTGCCACCTCAGACAGG------CACGTGTTCAAGAACCAC
O40928_HHV8/337-684 ATGCTTCAGAAAGACGCCAAGCTTATATTTATATCATCCGTGAACTCGTCAGACCGCTCCACGAGTTTCCTGCTTAACCTCAGGAACGCCCAGGAAAAGATGCTGAATGTGGTCAGTTACGTGTGTGCGGACCACCGCGAAGATTTCCACCTGCAAGACGCACTAGTGTCCTGTCCTTGTTACAGACTGCACATTCCGACGTACATCACCATCGACGAATCCATCAAAACCACCACCAACCTCTTTATGGAGGGGGCATTCGACACCGAACTAATGGGCGAGGGAGCAGCG.........TCGTCAAATGCTACG---CTTTACCGCGTGGTGGGTGACGCAGCGCTGACACAGTTTGACATGTGTCGGGTAGACACCACCGCCCAGCAGGTTCAGAAGTGCCTTGGAAAACAGCTGTTTGTTTACATCGACCCCGCGTATACGAACAACACGGAGGCGTCCGGTACTGGCGTGGGCGCCGTTGTCACGAGTACTCAGACTCCCACCAGAAGCCTCATATTGGGCATGGAGCATTTCTTCCTGCGCGACCTCACTGGCGCAGCTGCTTACGAGATAGCGTCCTGCGCATGCACGATGATTAAGGCGATCGCTGTGCTCCACCCC---ACAATTGAGCGCGTGAACGCGGCGGTCGAAGGCAACAGCAGCCAAGATTCTGGGGTGGCCATTGCAACCGTCCTTAACGAAATATGCCCG------------------------------------...CTCCCCATACATTTTCTACACTATACTGACAAGAGCAGCGCCCTGCAGTGGCCAATTTACATGTTGGGAGGCGAGAAATCCTCCGCGTTTGAGACATTCATCTACGCTCTGAACTCCGGCACCCTGAGCGCCAGCCAGACGGTGGTGTCCAACACCATCAAAATATCATTTGACCCGGTGACCTACCTGGTAGAACAGGTCCGCGCGATCAAGTGCGTCCCGCTTAGG.........GATGGAGGGCAGTCA---TACAGCGCCAAG...CAAAAGCAC---ATGTCGGACGACTTACTTGTGGCAGTTGTCATGGCCCATTTTATGGCTACCGATGATAGA------CACATGTACAAGCCCATA
VTER_EBV/342-689 ATGCTTCAGAAGGATGCCAAGATTATCTTCATCTCGTCTGTGAACTCGGCTGACCAGGCCACCAGCTTTCTTTATAAGCTGAAGGATGCTCAGGAGCGGCTGCTGAACGTGGTAAGTTATGTGTGTCAGGAGCATCGGCAAGATTTTGACATGCAGGACAGCATGGTCTCATGCCCCTGCTTTCGCCTGCACATCCCGTCCTACATCACCATGGACAGCAACATCCGAGCAACCACCAACCTCTTTCTGGACGGGGCCTTTAGCACCGAGCTGATGGGTGACACCTCCTCG.........CTGAGCCAGGGTAGC---CTGAGCCGCACTGTGCGTGACGATGCCATCAACCAGCTGGAGCTCTGCCGGGTTGACACCCTCAACCCCCGAGTAGCCGGACGCCTAGCCTCCTCCCTCTACGTGTACGTTGATCCGGCCTATACCAACAACACATCCGCATCAGGCACCGGAATCGCCGCCGTGACTCACGACAGGGCGGACCCTAACAGGGTCATCGTCCTGGGCCTGGAACACTTCTTCCTCAAGGACCTAACAGGGGACGCTGCCCTCCAGATCGCCACCTGCGTCGTGGCCCTCGTCTCCTCGATCGTCACCCTGCACCCC---CACTTGGAGGAGGTGAAGGTAGCCGTGGAGGGCAACAGCAGTCAGGACTCTGCGGTGGCCATTGCCTCAATCATTGGGGAATCCTGCCCC------------------------------------...CTCCCCTGCGCCTTCGTGCACACCAAGGACAAGACGTCCAGCCTGCAGTGGCCCATGTACCTCCTGACTAATGAGAAGTCCAAGGCCTTTGAGAGGCTCATCTACGCAGTGAACACGGCCAGCCTTTCTGCCAGTCAGGTCACCGTCTCCAACACCATCCAGCTCTCCTTCGATCCGGTCCTCTATCTCATCTCCCAGATCAGGGCCATCAAGCCCATCCCTCTCCGC.........GACGGTACCTACACC---TACACCGGCAAG...CAGCGCAAC---CTCTCTGACGACGTGCTGGTTGCGCTAGTCATGGCTCATTTTCTCGCAACAACACAGAAG------CACACGTTCAAGAAAGTT
O36378_9GAMA/336-680 ATGTTGCAGAAAGACGCTAAGATTATCTTTATATCTTCATCTAACTCATCTGATCAATCCACCAGCTTTTTATACAACCTTAAGGGTGCCAGCGAGAGAATGCTCAATGTTGTCAGCTATGTGTGCTCTAACCACAAAGAAGACTTTAGTATGCAAGATGGCCTTATTTCCTGCCCCTGTTATAGCCTTCACGTCCCCTCTTACATCTCCATTGATGAGCAGATTAAAACCACCACCAACTTATTTCTGGACGGGGTTTTTGACACAGAGCTGATGGGTGATTCTAGCTGT.........GGAACGCTGTCCACC------TTTCAGATAATCAGCGAGTCCGCCCTTTCTCAGTTTGAGTTGTGTAGGATAGACACAGCCTCCCCACAAGTACAAGCCCACCTAAACAGCACTGTTCACATGTACATAGATCCAGCATTTACTAATAATTTAGACGCCTCTGGAACTGGGATATCTGTAATTGGGCGGTTAGGAGCCAAA------ACTAAAGTTATCCTTGGCTGTGAACATTTTTTTCTTCAAAAGCTCACTGGCACAGCTGCCCTACAGATCGCTTCCTGTGCTACTTCCTTACTGCGGTCTGTGGTTATAATCCATCCC---ATGATAAAATGCGCTCAAATAACTATAGAGGGGAACAGCAGCCAAGACTCCGCAGTGGCAATTGCCAACTTTATTGACGAGTGCGCCCCT------------------------------------...ATCCCAGTCACATTTTACCACCAGTCTGACAAAACAAAGGGAGTGTTGTGCCCCCTCTATCTCCTCGGGCAGGAAAAGGCGGTAGCTTTTGAGTCATTCATCTATGCCATGAACCTGGGATTATGTAAGGCAAGTCAGTTAATTGTGTCTCATACAATAAAGCTCTCGTTTGATCCTGTGACCTACTTACTAGAGCAGGTCCGGGCCATCAAATGTCAGTCTCTAAGA.........GACGGCAGCCACACC---TACCATGCGAAG...CAAAAGAAC---TTGTCTGATGACTTACTCGTCTCTGTAGTGATGAGCTTGTATTTGTCCAGTGCCAACACC------CTCCCATTCAAGCCACTG
O41945_MHV68/1-345 ATGTTACAGAAGGATGCCAAGATCTTTTTTATCTCCTCTGTAAATTCAGGAGAGAAGACAACAAGTTTTTTGTATAACCTCAAAGATGCCAATGAGAAGATGGTGAACGTTGTCAGCTATGTCTGTAGCGAACATATGGAAGACTTCAACAAACAGAGCGCAATCACTGCCTGCCCTTGCTATCGCCTGTATGTTCCAGAATTTATCACCATCAATGATAATATAAAGTGTACCACCAATTTACTGCTAGAGGGATCATTTGCCACAGAATTAATGGGCAATATGCAATCA.........CACACGGAAGTCTCT---GGGAACAGTATGATACACGAGTCCAGTCTGACCCGGCTAGACTTTTATAGGTGTGACACTGCGGGC---CAGGGGGCCCCAACTACAGAAAATACACTTTTTGTGTATATTGACCCCGCCTATGGAAACAACGTCCACGCCTCTGGAACTGGTATAGTTGCCATGAGTCACTGTAAACACACT---AAAAAGTGTATTATCTTAGGGTTGGAACATTTCTTCCTGAACAACCTCACTGGAACTGCTGCTCACAACATAGCCTCATGTGCCACTGCTCTGTTGGAGGGAATATTGTTTCAACACCCC---TGGATTCAAGAAATCAGGTGTATAATAGAGGGAAATAGCAATCAAGACTCAGCTGTAGCCATAGCAACTTTTATTTCCCACAACATTAAA------------------------------------...CTACCAACCCTGTTTGCCTCCTACAGAGACAAGACT---GGAATGCAATGGCCTATTTATATGTTGAGTGGAGACAAGACACTGGCCTTCCAAAACTTTATCTCTTCATTGAACCAGGGATTGCTCTGTGCCAGCCAAACCGTGGTATCTAACACTGTCCTGCTGTCTAGTGACCCAATCTCCTATCTGATTGAACAGATAAAAAATACCAAATGTATATACCACAAG.........AACAAAACCATAACC---TTCCAATCCAAA...ACACATACA---ATGTCTGATGATGTTCTAATTGCGTGTGTTATGACCTGTTACGTGATGACAACAAACAAG------ATATCATACATCTCTTTT