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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02470 phylogeny
for nucleotide alignment


 
((((((((((((Q8A5U6_BACTN/36-114,Q7MVK8_PORGI/35-113),Q6MM72_BDEBA/40-119),((O26000_HELPY/37-117,Q7VH45_HELHP/37-117),Q6MGW6_BDEBA/33-120)),(((Q7UP64_RHOBA/37-115,(((((((Q7TWD4_MYCBO/43-119,Q73XW7_MYCPA/43-120),(Q73Y43_MYCPA/43-119,O53969_MYCTU/38-114)),O07415_MYCTU/38-113),(Q82B08_STRAW/104-180,Q73YV2_MYCPA/58-134)),((((Q7TWD3_MYCBO/41-118,(Q742S5_MYCPA/35-112,O53968_MYCTU/37-114)),O07414_MYCTU/35-113),((Q82B07_STRAW/59-136,Q745A2_MYCPA/35-111),Q7BUF1_AMYMD/36-113)),((Q73YV1_MYCPA/34-110,(Q7TWD5_MYCBO/38-114,(Q73Y44_MYCPA/36-112,O07416_MYCTU/45-121))),(Q82B09_STRAW/29-105,Q73XW6_MYCPA/31-107)))),(((((((((Q82B06_STRAW/37-116,Q6H2I1_MYCVN/43-121),(O07789_MYCTU/42-125,Q73Y41_MYCPA/50-129)),Q73XW9_MYCPA/51-131),Q7D5E7_MYCTU/39-118),Q73YV4_MYCPA/45-126),(O07418_MYCTU/38-114,(O53972_MYCTU/41-117,(Q73YU9_MYCPA/54-130,Q82B11_STRAW/38-116)))),Q73YV0_MYCPA/48-124),((Q742S1_MYCPA/34-110,O07417_MYCTU/50-126),Q82B10_STRAW/42-118)),(Q9A272_CAUCR/38-116,(Q8KFK1_CHLTE/41-123,(Q88P92_PSEPK/38-117,Q7VSZ8_BORPE/38-116))))),(Q74BX9_GEOSL/35-111,Q74EN6_GEOSL/41-123))),(Q6MIN3_BDEBA/38-114,(Q6MHX1_BDEBA/38-118,O66784_AQUAE/72-148))),((Q87PY6_VIBPA/36-138,((Q6D6W5_ERWCT/286-395,(Q6F8Y3_ACIAD/309-409,(((Q8Y1T8_RALSO/290-397,(Q7NUZ9_CHRVO/294-396,Q8XWB2_RALSO/309-416)),Q88JS2_PSEPK/291-403),Q880H9_PSESM/292-403))),(Q7DD93_NEIMB/290-397,(Q7N609_PHOLL/287-392,Q9KR88_VIBCH/291-397)))),((((Q8Y2M0_RALSO/36-114,Q7W229_BORPA/36-114),((((Q87DX7_XYLFT/38-116,Q72EG8_DESVH/38-116),Q9A5X7_CAUCR/38-116),(Y6063_BRAJA/38-116,Q89VS1_BRAJA/37-114)),Q8G0R6_BRUSU/38-116)),Q82TE2_NITEU/36-115),((((Q841X8_CAMFE/36-116,Q7MQT8_WOLSU/37-117),O67491_AQUAE/42-119),Q83DK1_COXBU/38-116),Q9PM28_CAMJE/38-116))))),Q7NDW7_GLOVI/36-113),(((Q55628_SYNY3/44-121,(Q8Z0B7_ANASP/46-123,Q8DGB2_SYNEL/38-113)),P73029_SYNY3/38-115),((((Q85G49_CYAME/37-107,Q8LDY9_ARATH/109-186),YCF22_ANTSP/20-97),((Q7U9P1_SYNPX/36-114,Q7V307_PROMP/36-114),Q7VDP8_PROMA/36-114)),(Q7MS05_WOLSU/35-111,(((Q93FP9_EHRRU/38-115,(Q73G58_WOLPM/39-117,Q6AKW0_DESPS/60-138)),Q92GL7_RICCN/36-114),((Q6F7P0_ACIAD/38-164,Q7VP47_HAEDU/39-118),((Q72N65_LEPIC/37-128,Q72R89_LEPIC/37-129),(Q6MAC1_PARUW/35-124,Q822Q3_CHLCV/36-123)))))))),(((Q6AQF6_DESPS/642-733,Q6LQU6_PHOPR/280-372),Q8EDY5_SHEON/264-394),(((Q6LQU6_PHOPR/634-725,(YEBT_ECOLI/633-724,Q8EDY5_SHEON/623-715)),((Q7VNV9_HAEDU/44-136,Q87PA6_VIBPA/46-138),(((Q88Q96_PSEPK/517-608,Q6MNT4_BDEBA/40-132),(((Q87N57_VIBPA/42-134,Q7DD93_NEIMB/48-140),Q83RX4_SHIFL/41-133),(((Q726I1_DESVH/47-139,Q88JS2_PSEPK/48-140),Q7VVC6_BORPE/53-145),Q6D6W5_ERWCT/43-135))),(Q88Q96_PSEPK/40-134,Q88Q96_PSEPK/279-371)))),Q6AQF6_DESPS/38-130))),(YEBT_ECOLI/279-361,Q6LQU6_PHOPR/394-474)),Q6MNT4_BDEBA/154-241),(Q83T44_SALTI/748-838,Q7VNV9_HAEDU/753-835)),Q6D6W5_ERWCT/158-248),Q9APY0_PSEAE/630-721,Q9APY0_PSEAE/155-245);
((((((((((((Q8A5U6_BACTN/36-114:0.53743,Q7MVK8_PORGI/35-113:0.47655):0.18802,Q6MM72_BDEBA/40-119:0.67801):0.16332,((O26000_HELPY/37-117:0.45981,Q7VH45_HELHP/37-117:0.44850):0.22491,Q6MGW6_BDEBA/33-120:0.28225):0.11803):0.07636,(((Q7UP64_RHOBA/37-115:0.60758,(((((((Q7TWD4_MYCBO/43-119:0.27482,Q73XW7_MYCPA/43-120:0.44622):0.07070,(Q73Y43_MYCPA/43-119:0.28799,O53969_MYCTU/38-114:0.31794):0.08203):0.07514,O07415_MYCTU/38-113:0.35989):0.02837,(Q82B08_STRAW/104-180:0.22103,Q73YV2_MYCPA/58-134:0.40574):0.11458):0.08217,((((Q7TWD3_MYCBO/41-118:0.31901,(Q742S5_MYCPA/35-112:0.22409,O53968_MYCTU/37-114:0.25623):0.06751):0.06317,O07414_MYCTU/35-113:0.47217):0.07794,((Q82B07_STRAW/59-136:0.21597,Q745A2_MYCPA/35-111:0.34967):0.10657,Q7BUF1_AMYMD/36-113:0.25417):0.08870):0.09042,((Q73YV1_MYCPA/34-110:0.30988,(Q7TWD5_MYCBO/38-114:0.31058,(Q73Y44_MYCPA/36-112:0.27352,O07416_MYCTU/45-121:0.30358):0.09072):0.05679):0.04737,(Q82B09_STRAW/29-105:0.31760,Q73XW6_MYCPA/31-107:0.32849):0.06937):0.14207):0.05968):0.01903,(((((((((Q82B06_STRAW/37-116:0.38811,Q6H2I1_MYCVN/43-121:0.21674):0.06717,(O07789_MYCTU/42-125:0.45325,Q73Y41_MYCPA/50-129:0.20975):0.03672):0.07020,Q73XW9_MYCPA/51-131:0.31389):0.11719,Q7D5E7_MYCTU/39-118:0.29888):0.14764,Q73YV4_MYCPA/45-126:0.57459):0.08150,(O07418_MYCTU/38-114:0.36356,(O53972_MYCTU/41-117:0.25358,(Q73YU9_MYCPA/54-130:0.44197,Q82B11_STRAW/38-116:0.22963):0.14737):0.08289):0.14225):0.08084,Q73YV0_MYCPA/48-124:0.47903):0.07157,((Q742S1_MYCPA/34-110:0.28441,O07417_MYCTU/50-126:0.36750):0.09881,Q82B10_STRAW/42-118:0.32477):0.13001):0.06004,(Q9A272_CAUCR/38-116:0.29533,(Q8KFK1_CHLTE/41-123:0.58525,(Q88P92_PSEPK/38-117:0.34793,Q7VSZ8_BORPE/38-116:0.29748):0.11668):0.01837):0.08734):0.06874):0.14516,(Q74BX9_GEOSL/35-111:0.47289,Q74EN6_GEOSL/41-123:0.41048):0.09968):0.10728):0.08238,(Q6MIN3_BDEBA/38-114:0.55689,(Q6MHX1_BDEBA/38-118:0.51543,O66784_AQUAE/72-148:0.39411):0.07763):0.06120):0.10683,((Q87PY6_VIBPA/36-138:0.64741,((Q6D6W5_ERWCT/286-395:0.39777,(Q6F8Y3_ACIAD/309-409:0.44954,(((Q8Y1T8_RALSO/290-397:0.26656,(Q7NUZ9_CHRVO/294-396:0.26502,Q8XWB2_RALSO/309-416:0.25415):0.07394):0.12994,Q88JS2_PSEPK/291-403:0.26589):0.06685,Q880H9_PSESM/292-403:0.25586):0.10521):0.10619):0.11800,(Q7DD93_NEIMB/290-397:0.46091,(Q7N609_PHOLL/287-392:0.39571,Q9KR88_VIBCH/291-397:0.43165):0.15964):0.11290):0.13018):0.25173,((((Q8Y2M0_RALSO/36-114:0.36029,Q7W229_BORPA/36-114:0.37999):0.10385,((((Q87DX7_XYLFT/38-116:0.36242,Q72EG8_DESVH/38-116:0.40334):0.07356,Q9A5X7_CAUCR/38-116:0.35696):0.06577,(Y6063_BRAJA/38-116:0.34889,Q89VS1_BRAJA/37-114:0.34598):0.10286):0.05452,Q8G0R6_BRUSU/38-116:0.34588):0.11730):0.16371,Q82TE2_NITEU/36-115:0.33869):0.10998,((((Q841X8_CAMFE/36-116:0.15692,Q7MQT8_WOLSU/37-117:0.53268):0.28831,O67491_AQUAE/42-119:0.45373):0.08224,Q83DK1_COXBU/38-116:0.41080):0.10891,Q9PM28_CAMJE/38-116:0.35752):0.13969):0.23171):0.11193):0.11152):0.09667,Q7NDW7_GLOVI/36-113:0.45020):0.05991,(((Q55628_SYNY3/44-121:0.32940,(Q8Z0B7_ANASP/46-123:0.27145,Q8DGB2_SYNEL/38-113:0.43477):0.09900):0.11248,P73029_SYNY3/38-115:0.41708):0.13685,((((Q85G49_CYAME/37-107:0.41665,Q8LDY9_ARATH/109-186:0.47472):0.06103,YCF22_ANTSP/20-97:0.24839):0.12234,((Q7U9P1_SYNPX/36-114:0.61545,Q7V307_PROMP/36-114:0.32766):0.12791,Q7VDP8_PROMA/36-114:0.14762):0.35477):0.08854,(Q7MS05_WOLSU/35-111:0.68822,(((Q93FP9_EHRRU/38-115:0.35837,(Q73G58_WOLPM/39-117:0.38314,Q6AKW0_DESPS/60-138:0.44925):0.08771):0.08649,Q92GL7_RICCN/36-114:0.33017):0.08493,((Q6F7P0_ACIAD/38-164:0.33315,Q7VP47_HAEDU/39-118:0.44160):0.05219,((Q72N65_LEPIC/37-128:0.46115,Q72R89_LEPIC/37-129:0.45119):0.15042,(Q6MAC1_PARUW/35-124:0.25242,Q822Q3_CHLCV/36-123:0.59524):0.19279):0.10963):0.08884):0.04473):0.10242):0.15319):0.12273):0.09345,(((Q6AQF6_DESPS/642-733:0.61428,Q6LQU6_PHOPR/280-372:0.42328):0.07269,Q8EDY5_SHEON/264-394:0.46660):0.16282,(((Q6LQU6_PHOPR/634-725:0.51061,(YEBT_ECOLI/633-724:0.47342,Q8EDY5_SHEON/623-715:0.47356):0.04614):0.11742,((Q7VNV9_HAEDU/44-136:0.29596,Q87PA6_VIBPA/46-138:0.41136):0.10516,(((Q88Q96_PSEPK/517-608:0.42093,Q6MNT4_BDEBA/40-132:0.32896):0.11091,(((Q87N57_VIBPA/42-134:0.28447,Q7DD93_NEIMB/48-140:0.35185):0.09278,Q83RX4_SHIFL/41-133:0.31808):0.11820,(((Q726I1_DESVH/47-139:0.30581,Q88JS2_PSEPK/48-140:0.31437):0.05906,Q7VVC6_BORPE/53-145:0.23748):0.10107,Q6D6W5_ERWCT/43-135:0.32746):0.07772):0.07813):0.13959,(Q88Q96_PSEPK/40-134:0.36154,Q88Q96_PSEPK/279-371:0.36327):0.13644):0.07005):0.09484):0.11003,Q6AQF6_DESPS/38-130:0.54019):0.04998):0.17578):0.05416,(YEBT_ECOLI/279-361:0.52327,Q6LQU6_PHOPR/394-474:0.72134):0.15231):0.23197,Q6MNT4_BDEBA/154-241:0.61672):0.09752,(Q83T44_SALTI/748-838:0.32353,Q7VNV9_HAEDU/753-835:0.58595):0.14358):0.21329,Q6D6W5_ERWCT/158-248:0.43774):0.17763,Q9APY0_PSEAE/630-721:0.32819,Q9APY0_PSEAE/155-245:0.19991);