EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01938 alignment
(33 sequences with 252 bp)


Y1620_METJA/435-499 AAAAAATATATTGGAAGAGTTTTAGAGGTTATAATATCAGAGAGACACTTTAGA---AATAAAAGAGATGCTATTGGCTATCTTCCAGAT.................................agtGGGTTGATGGTTGTTGTTAAAGATGGA---------------GCTAAATTTATTGGAAAAACAAAGAAAGTTAAAATAATTAAAGCTTATGAA......AAGTATTTAGAAGGAAGAATTTTAAAA
Y754_TREPA/387-452 CGCGCACGGGTAGGAAAGACATTGCCAGTGTTGGTAGAGTCGCGCTCGCGA---AATAATCCTGAAGAATTGTTTGGACATACAGAGCTT....................................GGGGAAATGACCGTGCTTGAAGGAAAG---------GTGGATCCTACGTACATCGGACGCTTTGTGGACGTGCAAGTGAAGGAAGTGCGCGGC......AGGACCTTGCGTGCCCATCTGGTGCAG
Y808_RICPR/383-445 CAAAGTTGTGTTGGTAGTACCATGAGAGTACTATTCGATCGTGATGGTAAA------TTTGAGGATCAAATAATAGGCAAAACTCCGTAC....................................ATGCAGTCCGTATATATCCATAATCCT------------AATAAATCTCTACTTGGTAAAATAGTCGATGTAATCATTACTAAGGCTGCGCTT......AATAGTTTAACCGGCGAAATATTA---
CK5P1_ARATH/538-618 GACTCTCAGGTAGGATCAACTCAGTTAGTTCTCGTCGAAGGACCAAACAAGAGAGCGCCTGAGACAGAACTCATTGGAAAAACTGATAAAggacacagagtttcgtttgtcacgaagcctctgtttGATAAAGCGTGTCTTCTTGATGGTGATGATCTGAAGAGGAATCCT---GGAATTGGGGATTTTGTTGAGGTTCAGATAGAGAAATCAACGAGG......GCATCGTTGTTTGGGGAAGCTCTCGCG
Y996_SYNY3/383-447 CAACGTTACCTCGGTCGGGTGGAAGAAGTGCTGGTGGAAGGGGAAAACCTT---AAGAGCCCAGGGCAGGTGATGGGACGCACCAGGGGC....................................AACCGCTTAACTTTTTTCCAAGGAGAG------------ATTAGCGAACTATTGGGTAAAACAGTGCCGGTAAAAATTACCGAAGCCCGGGCC......TTTAGCCTCACCGGGGAAGCTTTAAGT
Y284_AQUAE/377-437 AAAAAGTACGAAGGAACGGTTCAGGAAGTCCTTGTTGAAGAGGAG---------AAGAAC---GGTGAACTTATAGGCAGAACAACAACG....................................AACAAGTGGGCTTCCTTTAAGGGAGAC------------CCTTCA---CTTTTAGGAAAGATAGTGAAGATAAAGGTTATTAAGTCTTCTCCC......TTCAGTTTAGAGGGCGAACTTTTGGAG
YMCB_BACSU/440-503 AAGGAATACGAAGGCAAGGTTGTCGAAGTATTAGTTGAGGGTGAAAGCAAA---AATAACCCTGATATTCTTGCTGGCTATACTGAAAAA....................................AGCAAGCTTGTCAATTTCAAAGGGCCG------------AAGGAA---GCCATCGGCAAAATCGTCCGCGTGAAAATCCAGCAAGCGAAAACA......TGGTCGCTTGACGGAGAAATGGTAGGA
YLEA_ECOLI/378-441 CGCCGGATGCTCGGCACCACCCAGCGTATTCTGGTAGAAGGTACATCGCGT---AAGAGCATCATGGAGCTTTCCGGGCGTACGGAAAAT....................................AACCGCGTGGTCAACTTCGAAGGC---------------ACGCCGGATATGATCGGTAAATTCGTCGATGTAGAAATTACCGACGTCTACCCG......AACTCTCTGCGCGGTAAAGTGGTGCGT
Y019_HAEIN/378-441 CGTCGTATGCTTGGCACAGAGCAGCGCGTGTTAGTTGAAGGCCCATCGAAG---AAAGATATTATGGAATTGACGGGACGTACTGAAACG....................................AATCGTATTGTTAATTTCCAAGGT---------------TCTCCAGAAATGATCGGTAAGTTTGTGGATGTGAAAATCACTGATGTTTATACT......AATTCGTTACGTGGCGAAGTGGTGCGT
Y3980_PSEAE/378-442 CGGCGCATGGTCGGCAGCACCCAGCGGATCCTGGTCACCGACTTCTCGAAG---AAGGACCCAGGCATGCTCCAGGGGCGCACCGAGAAC....................................AACCGGATCGTCAACTTCCGCTGCGAC------------AATCCACGCCTGATCGGCCAGTTCGCCCAGGTGCACATCGACGACGCGCTGCCG......CACTCGCTGCGCGGTACCCTGATCGAC
Q9WZC1_THEMA/370-431 GAGCGATACAGAGGAAAGACGGTGCGTATCATCGTCGAAGCGCAGGCA---------AAGAACGGCCTCTTCTACGGCCGCGACATCAGG....................................AACAAGATCATCGCCTTCGAAGGT---------------GAAGATTGGATGATAGGGCGCTTTGCGGACGTGAAAGTGGAAAAGATCACTGCA......GGGCCCCTCTACGGAAAGGTGGTCTGG
Y826_METTH/368-424 AGACGCCTGGTGGGATCATTCCAGGAGATACTCGTTGTTGAGAGGGGA---------AGGAAGGGGGGTTTCATTGGAAGGACGGGTTCG....................................TACATCCCGGTTGTTACAGAAACCGGT------------GAGCCA---------GGGTCCTTCAGGAGGGTCAGGATAAGGGATGCCACAGGG......ACATACCTCCTGGCTGAT---------
Y1247_ARCFU/343-401 AAACGATTTGTTGGGAAAAAGCTCAGAGTTCTGGTCACGAAGGAGGGC---------AAAAACGGCAGAAATCTGGCGAGGATGAATTCC....................................TACAGGGCTGTTGTCACCGAGGGA---------------GCGGTG---------GGGGAGTTTGTTGAGGTAAAGATAAAGGACTGCAGGTTC......AACTACCTCATAGGCCAGTTAGCTGCA
Y867_METJA/373-427 AAAAAGTATATTGGAAAGGCTATGAAAGTTTTAGTTTTAGATGAGGGA---------AAA---GGT------------TATACTGACAAC....................................TTTAAAGTTGTTAAATTTGAAGGAGGG------------GAGGTA---------GGAGAGTTTAGAAAAGTGAAAATTACTGATGCTAAGACG......TTTGGATTGAAAGGGGAGCTTATCCTT
Y1729_PYRAB/366-425 CAGAAGTACATCGGCAAGAAAGTTGAAGTTCTCATCCATGGGGAAGGG---------AAGAAAGGCAACGTAGATGCCGTTACAATGAAC....................................TACAAGCATGTAATTTTACCATTTGGG------------AATAGT---------GGAGAGTTCAGGATAGCTGAAATTAAAAACGCTACATCA......ACGTATTTACTTGGTGAGGTCATGTCA
CK5P1_DROME/494-569 CGTAAAATGGAAGGCCAGGAGCAGCTCATACTTATAGAAGGGAAAAGCAAG---AGGTCCGATGCTCACTGGTTCGGTCGGAATGATGCCaatatcaag...............gtcatagttcctTCTATATATGTACCCATATCTGGAGATTCCACAGCCAGAAAATCGTTTGGAGTAGGTGACTTTTTGGCCGTCCGCATTGAGGAATCCAACTCA......CAGGTGCTGAAGGGCACGCCCCTCGAG
Q9YBR9_AERPE/391-453 GGGAGTTATGTGGGGCGAAGGGTGAGAGCCCTCGTCACAGAGCGGTCC------TGGAGGGAGGGGAGCATGACCGGGAGGCTAGACAAC....................................TACACACCCATAATCCTACCCTAC---------------GAGGAGAGGGCTATGGGAAGGTGGGTCTATGCGGAAGTTGAGGAGGCCACATTC......TTCGACCTGAGGTCCTCGAAGTTCGAA
YAD7_SCHPO/107-167 CCTTTTGAGCGCTTTCAAGAAATAGAGGTCAAAATTAGTTATTTGAGC---------TCGTCTGGTGATGGAATTGGCCTTGTTTGCAAT.................................gatCAATATGCAGTAGTAGTACCCTTTACA------------CTTCCA---------GGTGATATCGTGAAAGCCAAATTGCATTTTCTAGCTGAC......ACTTATGCACTGGCTGATTTTTTAGAA
TRM2_YEAST/163-228 TTACAATATCACCGAGAGGTAAAAAATGTCAAGGTCTTAGAAATTACT---------TCCAATGGCAACGGGTTGGCTTTGATCGATAATcctgttgaa..................acagaaaagAAGCAAGTTGTTATCATACCGTTTGGC------------CTGCCC---------GGTGATGTAGTTAATATCAAAGTCTTTAAGACCCACCCT......TACTATGTCGAGAGTGATTTATTAGAC
RR2A_CHLRE/28-87 AAATTAATTCCTGGAAATGTAATTTCTTTAAAAATTACTGCTATGGGT---------GCCAATAATGTAGGTATTAATGAATTTACATTT....................................GGTATTCCAGTGTTAGTACCAAACGCAAAA---------------------TTAGGTGAAACCGTTCAAGCTAAAGTGTTAAAAATTTTAGCAtcaaaaAAAATTGCTATTGCTAAATTA------
YFJO_BACSU/11-69 GAACTGAAGGTCGGACAAACTTTTCCGCTGACGATTAAGCGTCTCGGC---------ATTAACGGAGAAGGTGTTGGCTATTTTAAG---....................................AAAAAAGTCGTCTTCGTGCCCGGCGCG------------CTTCCT---------GGCGAAGAAGTTGTTGTGCAGGCCACAAAGGTCCAGCCG......AAGTTTTCGGAGGGCCGCATTAAGAAA
O07346_9SYNC/12-70 CTTTGGCAACAGGGGTCCGTAGTGGAACTGACCATTACCGGCCTCAAT---------CACCAAGGGGAGGGTATTGGCCGCTTTAAT---....................................GAGCGAGTAGTGTTTGTGCCCGACACG------------GCCCCC---------GGCGATCGCCTGGAAGTCCGCTTGGTAAAAGTCAAAAGA......AATTATGCCTTGGCCCAATTGCTCAAA
YEFA_BACSU/6-64 CCAGTAGAAAAAAATGAATACTACGATGTGACATTTGAGGATTTGACA---------CATGAAGGAGCGGGCGTCGCAAAGGTCCAA---....................................GGCTTCCCGATCTTTGTGCCGAATGCC------------CTACCC---------GAGGAAAAAGCCCAAATCAAAGTGACACGCGTCAAAAAA......GGGTTCGCCTTCGGCCGCCTGATTGAG
O54562_HALN1/80-139 CCGGTCACTGAAGGGGAAGTCCGTGACGTGACGATCGAGACAGTCGGC---------GATCAAGGCGATGGAATCGCGAAGGTCGAACGC....................................GGCTATGTCGTTATCATTCCAGGTGCG------------CAGCCC---------GGTGACGAGCCGACCATCGAAATCGACCAGGTCCAAGAG......AACGTCGCATTTGCCAGCGTTGTCGAT
O27331_METTH/15-73 CCGGTGAATGTGGGTGAGGAGTACGAAGTTAAAATTGAAGACCTTGGC---------AGAGATGGTGATGGAATAGCCCGTGTCGAA---....................................GGTTTTGTTGTTTTTGTACCTGGTGCA------------GGTGTA---------GGCGACGAGGTCAAGATAAGGATAAGTGCAACCAGGCGC......AAGTTTGCTTTCGCTGAAGTTGTAGAA
O29961_ARCFU/13-71 CCTGTGGAAGTTGGAGACATTAGGGAAGTAAGAATTGAGGCAGTAGGT---------TCGGAAGGGGACGGAATAGCGAAAGTTGAT---....................................GGCTTCGTGGTCTTCGTGCCCGGAGTC------------AAAGTG---------GATGATGTGGTGACCATCAGGATAACAAAGGTCCTGAGA......AAGTACGGCTTTGCCGAAGTTGTTGAG
Y660_METJA/20-77 CCAGTTAAAGAAGGCGAAACCTACACTGTTACAATTGAAGATATGGGT---------AGAGGCGGAGACGGAATAGCAAGAGTTGAA---....................................GGATTCGTTGTCTTCGTCCCTGAAACA------------CAAAAA---------GGAGAAACAGTCAATGTAAAAATAACTGCTGTAAAAAGT......AAGTTTGCATTTGCAGAAAAAATT---
Y5901_STRCO/23-84 GTCTCGCTGGTGGGCGAGGAGTACGAGGTCGAGGTCGGCCCCGTCGCC---------CACGGCGGCCACTGCATCGCCCGCACGTCCGAG....................................GGCCAGGTGCTGTTCGTCCGGCACACG------------CTGCCC---------GGCGAGCGGGTCGTGGCCCGGGTGACGGAGGGCGAGGAGggtgccCGCTTCCTGCGGGCGGACGCGGTCGAG
RUMA_ECOLI/9-67 CGCACGACGACGCGTCAGATCATAACCGTTTCAGTCAACGACCTCGAC---------TCTTTTGGTCAGGGCGTGGCGCGACATAAC---....................................GGCAAAACGCTATTTATCCCCGGATTA------------TTGCCG---------CAGGAAAACGCGGAAGTTACTGTTACTGAAGATAAAAAA......CAGTATGCCCGCGCTAAAGTCGTACGC
RUMA_HAEIN/10-68 AAAACAAAAAATGTTCAAACCATTACGGCTGATATTCTTGATTTAGAT---------TATCAAGGTTTAGGCGTGGCGAAAATTAAT---....................................GGTAAAACTTGGTTTATTGAAAATGCG------------CTTCCG---------CACGAAAAAGTGGAATGTCGTATTTTGGAAGATAAACGC......CAATATGGACACGCCATTGTAAAAAAA
Y257_AQUAE/1-57 ------ATGAAGGACAAACCTCTTAAACTCACTGTAGAAAAACTCGTT---------TACGGCGGTTACGGTTTTTCCAGATTAAAC---....................................GGTAAGGCAGTTTTTGTCCGCTTTGCG------------TCTCCC---------AAAGAACTGGTAGAGGCAAAAGTAGTAAAGGAGAAAAAG......GATTATACGGAAGCCGTAGTCACTAAA
Y1094_THEMA/1-55 ---------------ATGCTGGAGCAGGTGAGGATACAGAAGATGGTC---------AACGGAGGTTACGGCCTTGCCCATCTTTCAAAC....................................GGCAAGGTAGTTCTCGTAGAAGGAGCA------------TATCCC---------GGTGAGGAAGTCCTGATAAAGACCTACAGAGAGAAAAGG......GATTTTTCTTTTGGAAAGGTTGTTTCC
RR2A_CHLRE/104-169 GCATTAACACCAGGTGCTACGTTAGATGTAACTATTACAAAATTAGGA---------CCAAATTCAACAGGAATTGCTGATTTAGGT---....................................AATAATTACAATAATGTTAACAAACTAATTGTTAAAAAATCTGCTATTACAATTGGTGAAAAAGTTACAGTACTTGTAACACGTGTAAAAAAT......GGTTATGCATTTGGTGTAGCAACAGTT