EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01633 - Choline_kinase)
Choline/ethanolamine kinase
(Pfam reference: accession no. PF01633)
(Interpro reference: accession no. IPR002573)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
38 sequences @ 378 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 26.48)
nucleotides
(available for above)
36 sequences @ 1134 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 17.90)
amino acids, restricted set
(corresp. to available nt seqs)
36 sequences @ 378 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 25.88)