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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01589 - Alpha_E1_glycop)
Alphavirus E1 glycoprotein
(Pfam reference: accession no. PF01589)
(Interpro reference: accession no. IPR002548)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
8 sequences @ 505 aa
(ave. pairwise identity: 0.54)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.70)
nucleotides
(available for above)
5 sequences @ 1515 bp
(ave. pairwise identity: 0.57)
New Hampshire format
(total tree length: 1.67)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 505 aa
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 1.80)