EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01473 phylogeny
for nucleotide alignment


 
(((((((((((((((((Q8XMR3_CLOPE/178-196,Q8XMR4_CLOPE/707-725),(((Q8XMR3_CLOPE/138-156,Q8XMR4_CLOPE/627-645),(Q8XMR3_CLOPE/98-116,Q8XMR3_CLOPE/218-236)),(Q8XMR2_CLOPE/116-134,Q8XMR2_CLOPE/76-94))),Q46288_CLOPE/75-93),((((Q46149_CLONO/1891-1909,Q8XMR2_CLOPE/216-234),Q8XMR3_CLOPE/78-96),Q8XMR2_CLOPE/176-194),((Q8XMR2_CLOPE/56-74,(Q8DR40_STRR6/3-21,Q97SI4_STRPN/301-319)),(Q8XMR2_CLOPE/96-114,((((Q8XMR3_CLOPE/278-296,Q8XMR2_CLOPE/136-154),Q8XMR4_CLOPE/767-785),Q8XMR4_CLOPE/647-665),Q8XMR4_CLOPE/687-705))))),((Q8DMZ4_STRR6/352-370,(O30874_STRPN/445-463,(ALYS_BPDP1/218-236,Q9AF60_9CAUD/218-236))),(Q8XMQ8_CLOPE/63-80,((((((Q9KGY8_STRPN/133-151,O05168_STRPN/216-234),(((Q8DQ62_STRR6/441-459,Q8DMZ4_STRR6/392-410),Q9KGY8_STRPN/113-131),(Q8DP99_STRR6/92-110,(((O05166_STRPN/689-707,Q9KGY8_STRPN/173-191),O05168_STRPN/257-275),Q8DMZ4_STRR6/412-430)))),Q8DR52_STRR6/219-237),((O66380_ERYRH/467-485,O66380_ERYRH/487-505),(((Q8DP07_STRR6/153-171,O66380_ERYRH/447-465),Q8XMR4_CLOPE/607-625),Q97SH5_STRPN/226-244))),Q9KGY8_STRPN/93-111),(((((GTFS_STRDO/1344-1362,(ALYS_STRPN/218-237,Q8RJT8_STRPN/218-237)),((ALYS_BPDP1/174-194,ALYS_STRPN/197-215),LYCA_BPCP1/221-239)),Q00600_STRSL/1298-1316),Q8DQ62_STRR6/360-378),ALYS_STRPN/239-257))))),((Q8XMR2_CLOPE/156-174,((Q9ZFN0_9FIRM/246-264,Q8XMR3_CLOPE/158-176),Q46288_CLOPE/55-73)),Q8DR52_STRR6/239-258)),((Q8XMQ8_CLOPE/82-100,(Q46288_CLOPE/15-33,Q46288_CLOPE/35-53)),((Q45821_CLOAB/504-522,(Q8XMW8_CLOPE/98-116,Q97K42_CLOAB/2208-2226)),(((Q8XMR3_CLOPE/198-216,Q97K42_CLOAB/2631-2649),((((Q97K42_CLOAB/2510-2528,Q97K42_CLOAB/2329-2347),((((Q97K42_CLOAB/398-416,Q97K42_CLOAB/338-356),((Q97K42_CLOAB/278-296,((Q97K42_CLOAB/1586-1604,Q97K42_CLOAB/2470-2488),Q97K42_CLOAB/1299-1317)),Q97K42_CLOAB/2024-2042)),(Q97K42_CLOAB/686-704,Q97K42_CLOAB/2712-2730)),(((Q97K42_CLOAB/1051-1069,Q97K42_CLOAB/2349-2367),Q46342_CLOSO/1988-2006),(TOXB_CLODI/1986-2004,Q9EXR0_CLODI/1988-2006)))),((Q97K42_CLOAB/973-991,(Q97K42_CLOAB/518-536,(Q97K42_CLOAB/846-864,Q97K42_CLOAB/2389-2407))),Q97K42_CLOAB/666-684)),(Q97K42_CLOAB/2591-2609,Q46034_CLODI/1968-1986))),((Q8XMR3_CLOPE/258-276,((Q97K42_CLOAB/2671-2689,Q97K42_CLOAB/2752-2770),(Q97K42_CLOAB/1867-1885,(Q97K42_CLOAB/1378-1396,Q97K42_CLOAB/765-783)))),((Q97K42_CLOAB/418-436,(((((Q97K42_CLOAB/826-844,Q97K42_CLOAB/1071-1089),Q97K42_CLOAB/298-316),ALYS_BPDP1/238-257),((Q97K42_CLOAB/558-576,(Q97K42_CLOAB/2611-2629,(Q97K42_CLOAB/953-971,Q97K42_CLOAB/1807-1825))),Q97K42_CLOAB/358-376)),(Q54447_STRMU/275-293,((Q97K42_CLOAB/2490-2508,Q97K42_CLOAB/2289-2307),Q97K42_CLOAB/479-497)))),(Q97K42_CLOAB/2309-2327,Q97K42_CLOAB/706-724))))))),((((Q8XMR3_CLOPE/58-76,(Q9ZFN0_9FIRM/330-348,Q9ZFN2_9FIRM/14-32)),Q9ZFN0_9FIRM/288-306),Q8XMQ8_CLOPE/43-61),Q9KGY9_STRPN/157-175)),Q8XMW8_CLOPE/78-96),(Q45820_CLOAB/593-611,(Q45819_CLOAB/552-570,Q45821_CLOAB/544-562))),Q45820_CLOAB/613-631),(((((((Q55265_STRSL/1389-1407,Q00599_STRSL/1115-1133),Q48756_LEUME/921-939),Q9RE05_LEUME/1381-1400),((((Q55265_STRSL/1324-1344,(((GTFD_STRMU/1247-1266,(GTFD_STRMU/1311-1330,GTFD_STRMU/1375-1394)),((Q8DUW9_STRMU/150-169,(GTF1_STRDO/1217-1236,GTF1_STRDO/1282-1301)),Q8DUW9_STRMU/215-233)),(GTF1_STRDO/1573-1591,Q9WXJ5_9STRE/1446-1464))),(((Q55265_STRSL/1512-1531,(Q54178_STRGN/1358-1377,Q8G9Q2_LEUME/1558-1577)),GTFC_STRMU/1373-1392),(GTFB_STRMU/1280-1299,Q8KZL5_9STRE/1533-1551))),(((O52224_LEUME/1164-1183,Q54178_STRGN/1163-1182),((GTFB_STRMU/1088-1106,GTFC_STRMU/1117-1135),((((Q8G9Q2_LEUME/1232-1251,Q8KZL5_9STRE/1092-1110),Q55265_STRSL/1192-1211),Q9RE05_LEUME/1327-1346),(Q8G9Q2_LEUME/1170-1188,O68542_STRSL/1156-1175)))),GTFD_STRMU/1117-1136)),(((O68542_STRSL/1365-1383,(GTFS_STRDO/1074-1092,Q9WXJ4_9STRE/1046-1064)),Q8KZL5_9STRE/1227-1245),(((Q00599_STRSL/1252-1270,Q9WXJ5_9STRE/1248-1266),Q54447_STRMU/160-178),((Q00599_STRSL/1511-1530,Q00600_STRSL/1427-1446),(Q8KZL5_9STRE/1381-1400,Q8KZL5_9STRE/1468-1487)))))),((ALYS_STRPN/281-301,(ALYS_BPDP1/260-278,LYCA_BPCP1/304-322)),Q53275_STRPN/281-299)),Q8CZ16_STRR6/94-112),((LYTB_STRPN/87-105,Q53275_STRPN/259-278),((ALYS_STRPN/259-278,Q9KGY8_STRPN/153-171),(Q8DQ62_STRR6/521-539,LYCA_BPCP1/282-301))))),((((Q8DNH0_STRR6/42-60,O05166_STRPN/469-487),Q8DQ62_STRR6/421-439),Q8DQ62_STRR6/461-479),(Q9ZFN0_9FIRM/267-285,Q9ZFN1_9FIRM/289-307))),((Q45819_CLOAB/512-530,((((Q7UUN6_RHOBA/156-175,ALYS_BPDP1/197-216),((LYTB_STRPN/230-248,(Q8CZ16_STRR6/132-152,Q8DP07_STRR6/130-150)),(LYTB_STRPN/251-271,(LYTB_STRPN/148-166,(LYTB_STRPN/209-227,LYTB_STRPN/66-84))))),Q45822_CLOAB/495-513),(((Q45820_CLOAB/553-571,(Q45819_CLOAB/532-550,((Q8DMZ4_STRR6/372-390,O30874_STRPN/605-623),LYCA_BPCP1/262-280))),(Q45820_CLOAB/512-531,Q45820_CLOAB/533-551)),(Q9KGY7_STRPN/192-211,O05168_STRPN/236-255)))),((O34097_STRPN/576-594,Q8DP99_STRR6/71-89),(O30874_STRPN/465-483,Q9KK54_STRPN/580-598)))),(LYCA_BPCP1/242-260,((LYCA_BPCP1/200-218,Y812_ARCFU/125-144),Q8DQ62_STRR6/381-399))),Q8KSD4_STRPN/201-219),O30874_STRPN/626-644,O34097_STRPN/617-635);
(((((((((((((((((Q8XMR3_CLOPE/178-196:0.11707,Q8XMR4_CLOPE/707-725:0.25636):0.02131,(((Q8XMR3_CLOPE/138-156:0.21854,Q8XMR4_CLOPE/627-645:0.07085):0.03185,(Q8XMR3_CLOPE/98-116:0.09556,Q8XMR3_CLOPE/218-236:0.10366):0.07995):0.01278,(Q8XMR2_CLOPE/116-134:0.17656,Q8XMR2_CLOPE/76-94:0.11351):0.13829):0.02150):0.12827,Q46288_CLOPE/75-93:0.11951):0.00000,((((Q46149_CLONO/1891-1909:0.20536,Q8XMR2_CLOPE/216-234:0.15833):0.06120,Q8XMR3_CLOPE/78-96:0.15404):0.00399,Q8XMR2_CLOPE/176-194:0.12208):0.01982,((Q8XMR2_CLOPE/56-74:0.28110,(Q8DR40_STRR6/3-21:0.04401,Q97SI4_STRPN/301-319:0.05338):0.08434):0.07555,(Q8XMR2_CLOPE/96-114:0.06541,((((Q8XMR3_CLOPE/278-296:0.17849,Q8XMR2_CLOPE/136-154:0.20363):0.04459,Q8XMR4_CLOPE/767-785:0.07063):0.05377,Q8XMR4_CLOPE/647-665:0.06348):0.00970,Q8XMR4_CLOPE/687-705:0.20087):0.06125):0.04762):0.05321):0.07701):0.05007,((Q8DMZ4_STRR6/352-370:0.28214,(O30874_STRPN/445-463:0.23307,(ALYS_BPDP1/218-236:0.31827,Q9AF60_9CAUD/218-236:0.02497):0.15781):0.07142):0.04556,(Q8XMQ8_CLOPE/63-80:0.27612,((((((Q9KGY8_STRPN/133-151:0.23359,O05168_STRPN/216-234:0.23492):0.07300,(((Q8DQ62_STRR6/441-459:0.31170,Q8DMZ4_STRR6/392-410:0.18919):0.10892,Q9KGY8_STRPN/113-131:0.32972):0.06711,(Q8DP99_STRR6/92-110:0.35252,(((O05166_STRPN/689-707:0.19523,Q9KGY8_STRPN/173-191:0.19735):0.09426,O05168_STRPN/257-275:0.00000):0.06794,Q8DMZ4_STRR6/412-430:0.23510):0.05492):0.18211):0.04762):0.03206,Q8DR52_STRR6/219-237:0.21383):0.13687,((O66380_ERYRH/467-485:0.11796,O66380_ERYRH/487-505:0.07350):0.10220,(((Q8DP07_STRR6/153-171:0.45275,O66380_ERYRH/447-465:0.17766):0.07146,Q8XMR4_CLOPE/607-625:0.18445):0.05372,Q97SH5_STRPN/226-244:0.26956):0.03737):0.08450):0.04240,Q9KGY8_STRPN/93-111:0.13427):0.03721,(((((GTFS_STRDO/1344-1362:0.31323,(ALYS_STRPN/218-237:0.06882,Q8RJT8_STRPN/218-237:0.07685):0.09068):0.10407,((ALYS_BPDP1/174-194:0.37263,ALYS_STRPN/197-215:0.00000):0.13491,LYCA_BPCP1/221-239:0.34518):0.17487):0.12458,Q00600_STRSL/1298-1316:0.38694):0.04114,Q8DQ62_STRR6/360-378:0.25620):0.13526,ALYS_STRPN/239-257:0.07806):0.06252):0.03779):0.06907):0.06368):0.01085,((Q8XMR2_CLOPE/156-174:0.01573,((Q9ZFN0_9FIRM/246-264:0.18044,Q8XMR3_CLOPE/158-176:0.31649):0.14278,Q46288_CLOPE/55-73:0.20223):0.05406):0.16260,Q8DR52_STRR6/239-258:0.14890):0.06111):0.08145,((Q8XMQ8_CLOPE/82-100:0.06209,(Q46288_CLOPE/15-33:0.14306,Q46288_CLOPE/35-53:0.10873):0.05134):0.05542,((Q45821_CLOAB/504-522:0.23124,(Q8XMW8_CLOPE/98-116:0.14901,Q97K42_CLOAB/2208-2226:0.23829):0.20373):0.00000,(((Q8XMR3_CLOPE/198-216:0.13643,Q97K42_CLOAB/2631-2649:0.19363):0.12038,((((Q97K42_CLOAB/2510-2528:0.23374,Q97K42_CLOAB/2329-2347:0.04573):0.12188,((((Q97K42_CLOAB/398-416:0.13686,Q97K42_CLOAB/338-356:0.08593):0.09587,((Q97K42_CLOAB/278-296:0.24453,((Q97K42_CLOAB/1586-1604:0.16385,Q97K42_CLOAB/2470-2488:0.15585):0.07171,Q97K42_CLOAB/1299-1317:0.21318):0.00000):0.00000,Q97K42_CLOAB/2024-2042:0.08932):0.04278):0.08003,(Q97K42_CLOAB/686-704:0.19538,Q97K42_CLOAB/2712-2730:0.22110):0.06804):0.00000,(((Q97K42_CLOAB/1051-1069:0.21896,Q97K42_CLOAB/2349-2367:0.10763):0.11113,Q46342_CLOSO/1988-2006:0.10226):0.07108,(TOXB_CLODI/1986-2004:0.08201,Q9EXR0_CLODI/1988-2006:0.06069):0.16775):0.09050):0.07009):0.06049,((Q97K42_CLOAB/973-991:0.20951,(Q97K42_CLOAB/518-536:0.13285,(Q97K42_CLOAB/846-864:0.12801,Q97K42_CLOAB/2389-2407:0.17951):0.03760):0.05279):0.04244,Q97K42_CLOAB/666-684:0.20178):0.08186):0.04115,(Q97K42_CLOAB/2591-2609:0.10310,Q46034_CLODI/1968-1986:0.34216):0.06364):0.02704):0.00000,((Q8XMR3_CLOPE/258-276:0.30517,((Q97K42_CLOAB/2671-2689:0.16677,Q97K42_CLOAB/2752-2770:0.14781):0.18020,(Q97K42_CLOAB/1867-1885:0.20150,(Q97K42_CLOAB/1378-1396:0.10265,Q97K42_CLOAB/765-783:0.27987):0.04684):0.02319):0.13901):0.04012,((Q97K42_CLOAB/418-436:0.19706,(((((Q97K42_CLOAB/826-844:0.24468,Q97K42_CLOAB/1071-1089:0.22012):0.06971,Q97K42_CLOAB/298-316:0.14178):0.03015,ALYS_BPDP1/238-257:0.30071):0.08233,((Q97K42_CLOAB/558-576:0.35995,(Q97K42_CLOAB/2611-2629:0.10189,(Q97K42_CLOAB/953-971:0.32437,Q97K42_CLOAB/1807-1825:0.13013):0.27203):0.00435):0.08795,Q97K42_CLOAB/358-376:0.12278):0.08534):0.05760,(Q54447_STRMU/275-293:0.17776,((Q97K42_CLOAB/2490-2508:0.17196,Q97K42_CLOAB/2289-2307:0.28990):0.04963,Q97K42_CLOAB/479-497:0.39348):0.02065):0.03201):0.03569):0.08686,(Q97K42_CLOAB/2309-2327:0.23604,Q97K42_CLOAB/706-724:0.16769):0.03848):0.09317):0.01976):0.08183):0.01843):0.00000):0.07228,((((Q8XMR3_CLOPE/58-76:0.25809,(Q9ZFN0_9FIRM/330-348:0.25922,Q9ZFN2_9FIRM/14-32:0.03930):0.04368):0.21498,Q9ZFN0_9FIRM/288-306:0.20076):0.10133,Q8XMQ8_CLOPE/43-61:0.32064):0.13963,Q9KGY9_STRPN/157-175:0.20627):0.20013):0.07110,Q8XMW8_CLOPE/78-96:0.09592):0.02784,(Q45820_CLOAB/593-611:0.20665,(Q45819_CLOAB/552-570:0.07192,Q45821_CLOAB/544-562:0.19967):0.04531):0.06809):0.04216,Q45820_CLOAB/613-631:0.09701):0.09298,(((((((Q55265_STRSL/1389-1407:0.27065,Q00599_STRSL/1115-1133:0.36639):0.07750,Q48756_LEUME/921-939:0.17498):0.07032,Q9RE05_LEUME/1381-1400:0.25164):0.06952,((((Q55265_STRSL/1324-1344:0.35519,(((GTFD_STRMU/1247-1266:0.18577,(GTFD_STRMU/1311-1330:0.24435,GTFD_STRMU/1375-1394:0.17227):0.03677):0.11664,((Q8DUW9_STRMU/150-169:0.26041,(GTF1_STRDO/1217-1236:0.08677,GTF1_STRDO/1282-1301:0.12830):0.15568):0.07352,Q8DUW9_STRMU/215-233:0.10174):0.00139):0.09863,(GTF1_STRDO/1573-1591:0.45268,Q9WXJ5_9STRE/1446-1464:0.11280):0.16723):0.12075):0.00000,(((Q55265_STRSL/1512-1531:0.16917,(Q54178_STRGN/1358-1377:0.19392,Q8G9Q2_LEUME/1558-1577:0.37359):0.20001):0.07103,GTFC_STRMU/1373-1392:0.29002):0.11199,(GTFB_STRMU/1280-1299:0.00000,Q8KZL5_9STRE/1533-1551:0.35687):0.18607):0.04186):0.09240,(((O52224_LEUME/1164-1183:0.17986,Q54178_STRGN/1163-1182:0.13342):0.02892,((GTFB_STRMU/1088-1106:0.01103,GTFC_STRMU/1117-1135:0.15122):0.25432,((((Q8G9Q2_LEUME/1232-1251:0.41917,Q8KZL5_9STRE/1092-1110:0.16415):0.09265,Q55265_STRSL/1192-1211:0.15872):0.03272,Q9RE05_LEUME/1327-1346:0.12843):0.05605,(Q8G9Q2_LEUME/1170-1188:0.11950,O68542_STRSL/1156-1175:0.32832):0.07497):0.00000):0.05809):0.05365,GTFD_STRMU/1117-1136:0.09012):0.00000):0.16420,(((O68542_STRSL/1365-1383:0.03422,(GTFS_STRDO/1074-1092:0.09787,Q9WXJ4_9STRE/1046-1064:0.07327):0.16750):0.16041,Q8KZL5_9STRE/1227-1245:0.20281):0.14580,(((Q00599_STRSL/1252-1270:0.17359,Q9WXJ5_9STRE/1248-1266:0.35074):0.12231,Q54447_STRMU/160-178:0.29518):0.05588,((Q00599_STRSL/1511-1530:0.39498,Q00600_STRSL/1427-1446:0.22683):0.09117,(Q8KZL5_9STRE/1381-1400:0.14976,Q8KZL5_9STRE/1468-1487:0.08755):0.04667):0.15532):0.09928):0.04853):0.00000):0.03790,((ALYS_STRPN/281-301:0.03794,(ALYS_BPDP1/260-278:0.42933,LYCA_BPCP1/304-322:0.31701):0.07963):0.34393,Q53275_STRPN/281-299:0.04292):0.43553):0.08756,Q8CZ16_STRR6/94-112:0.32181):0.02605,((LYTB_STRPN/87-105:0.41350,Q53275_STRPN/259-278:0.07431):0.08967,((ALYS_STRPN/259-278:0.15095,Q9KGY8_STRPN/153-171:0.19034):0.09176,(Q8DQ62_STRR6/521-539:0.28734,LYCA_BPCP1/282-301:0.16468):0.10729):0.03752):0.05314):0.06199):0.03527,((((Q8DNH0_STRR6/42-60:0.25295,O05166_STRPN/469-487:0.23046):0.07996,Q8DQ62_STRR6/421-439:0.17311):0.11078,Q8DQ62_STRR6/461-479:0.18337):0.08689,(Q9ZFN0_9FIRM/267-285:0.03479,Q9ZFN1_9FIRM/289-307:0.03814):0.19072):0.11117):0.07064,((Q45819_CLOAB/512-530:0.12284,((((Q7UUN6_RHOBA/156-175:0.26516,ALYS_BPDP1/197-216:0.22453):0.28377,((LYTB_STRPN/230-248:0.20424,(Q8CZ16_STRR6/132-152:0.16840,Q8DP07_STRR6/130-150:0.19772):0.19783):0.13509,(LYTB_STRPN/251-271:0.05523,(LYTB_STRPN/148-166:0.34706,(LYTB_STRPN/209-227:0.16473,LYTB_STRPN/66-84:0.26086):0.07121):0.13981):0.07009):0.06655):0.07429,Q45822_CLOAB/495-513:0.15901):0.08470,(((Q45820_CLOAB/553-571:0.16568,(Q45819_CLOAB/532-550:0.08591,((Q8DMZ4_STRR6/372-390:0.27955,O30874_STRPN/605-623:0.07515):0.05312,LYCA_BPCP1/262-280:0.34149):0.06450):0.02197):0.07550,(Q45820_CLOAB/512-531:0.31670,Q45820_CLOAB/533-551:0.00497):0.06589):0.02559,(Q9KGY7_STRPN/192-211:0.25932,O05168_STRPN/236-255:0.20009):0.16582):0.09285):0.03383):0.14241,((O34097_STRPN/576-594:0.10597,Q8DP99_STRR6/71-89:0.09109):0.08694,(O30874_STRPN/465-483:0.09063,Q9KK54_STRPN/580-598:0.09262):0.00000):0.02179):0.05520):0.17309,(LYCA_BPCP1/242-260:0.08187,((LYCA_BPCP1/200-218:0.55006,Y812_ARCFU/125-144:0.28229):0.26532,Q8DQ62_STRR6/381-399:0.44011):0.29585):0.02231):0.23890,Q8KSD4_STRPN/201-219:0.05390):0.14588,O30874_STRPN/626-644:0.00000,O34097_STRPN/617-635:0.09283);