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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01446 - Rep_1)
Replication protein
(Pfam reference: accession no. PF01446)
(Interpro reference: accession no. IPR000989)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
25 sequences @ 308 aa
(ave. pairwise identity: 0.38)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 14.30)
nucleotides
(available for above)
25 sequences @ 924 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 10.46)
amino acids, restricted set
(corresp. to available nt seqs)
25 sequences @ 308 aa
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 14.30)