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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01443 phylogeny
for amino acid alignment


 
((((((Q05149_NVMV/89-314,(((O91902_9VIRU/24-221,(O91633_9VIRU/24-221,Q64963_9VIRU/24-222)),(((((VHEL_PVSP/24-219,Q83086_LSV/24-220),VHEL_PVMR/24-221),VHEL_CVB/24-223),(Q67552_9VIRU/24-228,Q67655_9VIRU/24-227)),((VHEL_PMV/24-222,(VHEL_PVXX3/25-224,((Q65975_9VIRU/24-224,(Q65007_9VIRU/27-230,VHEL_FXMV/27-229)),VHEL_P1AMV/24-223))),(((VHEL_WCMVO/24-228,((Q86822_PAMV/28-230,O37154_9VIRU/26-224),VHEL_NMV/26-224)),VHEL_SMYEA/25-221),VHEL_LVX/23-216)))),((O55598_9VIRU/29-233,VHEL_SHVX/26-227),((O09499_9VIRU/26-227,O55600_9VIRU/33-234),O55602_9VIRU/29-231)))),((((O09498_9VIRU/744-977,RRPO_SHVX/911-1143),((RRPO_PVXCP/731-964,(Q65005_9VIRU/633-864,RRPO_FXMV/599-830)),(((RRPO_P1AMV/661-892,Q65974_9VIRU/731-962),O37153_9VIRU/659-893),RRPO_SMYEA/601-834))),((P89920_9VIRU/925-1156,((POLR_EPMV/961-1193,O91260_PHMV/1057-1291),(POLR_KYMVJ/998-1235,(POLR_ELV/870-1103,O56254_TYMV/972-1205)))),POLR_OYMV/895-1128)),(Q96806_9VIRU/921-1144,Q67704_9VIRU/923-1149))),(((((Q05983_RBDV/855-1113,Q65661_BMV/681-947),((Q66108_9BROM/761-1014,O57161_9BROM/771-1024),(P89033_9BROM/766-1025,V125_AMVLE/834-1094))),(O93163_9VIRU/977-1239,(194K_TRVSY/900-1156,(Q84918_9VIRU/892-1148,Q84701_PEBV/959-1215)))),((RRPO_SHMV/845-1099,RRPO_CGMVS/859-1113),(((RRPO_TMV/829-1085,RRPO_PMMVS/831-1086),RRPO_TMOB/828-1084),(Q84124_9VIRU/822-1081,RRPO_TVCV/823-1076)))),POLN_HEVME/969-1183)),Q65667_9VIRU/938-1182),((Q08317_9VIRU/189-413,(Q65726_9VIRU/175-400,(O92516_9VIRU/230-455,Q85291_9VIRU/211-436))),((V58K_BSMV/265-489,Q85079_9VIRU/323-547),Q83077_9VIRU/188-413))),Q65674_9VIRU/119-353,O72591_9VIRU/117-351);
((((((Q05149_NVMV/89-314:1.05769,(((O91902_9VIRU/24-221:0.51511,(O91633_9VIRU/24-221:0.53846,Q64963_9VIRU/24-222:0.49657):0.08203):0.20131,(((((VHEL_PVSP/24-219:0.37029,Q83086_LSV/24-220:0.33638):0.14208,VHEL_PVMR/24-221:0.36854):0.14066,VHEL_CVB/24-223:0.37141):0.14599,(Q67552_9VIRU/24-228:0.10540,Q67655_9VIRU/24-227:0.16817):0.76777):0.11840,((VHEL_PMV/24-222:0.52981,(VHEL_PVXX3/25-224:0.85833,((Q65975_9VIRU/24-224:0.46317,(Q65007_9VIRU/27-230:0.24851,VHEL_FXMV/27-229:0.53211):0.37066):0.08370,VHEL_P1AMV/24-223:0.35274):0.10252):0.07215):0.23104,(((VHEL_WCMVO/24-228:0.58087,((Q86822_PAMV/28-230:0.95464,O37154_9VIRU/26-224:0.70481):0.23112,VHEL_NMV/26-224:0.94750):0.26085):0.12754,VHEL_SMYEA/25-221:0.85359):0.17139,VHEL_LVX/23-216:0.74100):0.13241):0.13188):0.06341):0.32834,((O55598_9VIRU/29-233:0.37086,VHEL_SHVX/26-227:0.13351):0.14431,((O09499_9VIRU/26-227:0.14289,O55600_9VIRU/33-234:0.26799):0.15064,O55602_9VIRU/29-231:0.27743):0.08144):0.52301):0.75603):0.22565,((((O09498_9VIRU/744-977:0.07887,RRPO_SHVX/911-1143:0.20152):0.32849,((RRPO_PVXCP/731-964:0.36459,(Q65005_9VIRU/633-864:0.16487,RRPO_FXMV/599-830:0.23026):0.19532):0.06418,(((RRPO_P1AMV/661-892:0.21087,Q65974_9VIRU/731-962:0.16110):0.23354,O37153_9VIRU/659-893:0.40602):0.03889,RRPO_SMYEA/601-834:0.36900):0.06539):0.22245):0.46513,((P89920_9VIRU/925-1156:0.35959,((POLR_EPMV/961-1193:0.14882,O91260_PHMV/1057-1291:0.27419):0.11362,(POLR_KYMVJ/998-1235:0.26466,(POLR_ELV/870-1103:0.26364,O56254_TYMV/972-1205:0.32075):0.06993):0.05163):0.08396):0.08460,POLR_OYMV/895-1128:0.13995):0.70193):0.34414,(Q96806_9VIRU/921-1144:0.42268,Q67704_9VIRU/923-1149:0.49478):0.40997):0.71956):0.49414,(((((Q05983_RBDV/855-1113:0.70268,Q65661_BMV/681-947:0.64985):0.18292,((Q66108_9BROM/761-1014:0.18317,O57161_9BROM/771-1024:0.10826):0.34924,(P89033_9BROM/766-1025:0.28840,V125_AMVLE/834-1094:0.24435):0.18927):0.23863):0.22384,(O93163_9VIRU/977-1239:0.35820,(194K_TRVSY/900-1156:0.18265,(Q84918_9VIRU/892-1148:0.15666,Q84701_PEBV/959-1215:0.08459):0.11677):0.32129):0.28151):0.13397,((RRPO_SHMV/845-1099:0.35083,RRPO_CGMVS/859-1113:0.31661):0.08542,(((RRPO_TMV/829-1085:0.13427,RRPO_PMMVS/831-1086:0.12411):0.03905,RRPO_TMOB/828-1084:0.17075):0.06333,(Q84124_9VIRU/822-1081:0.19553,RRPO_TVCV/823-1076:0.19095):0.09891):0.09431):0.23866):0.55959,POLN_HEVME/969-1183:1.13813):0.47390):0.18086,Q65667_9VIRU/938-1182:1.51806):0.36812,((Q08317_9VIRU/189-413:0.32225,(Q65726_9VIRU/175-400:0.14484,(O92516_9VIRU/230-455:0.19377,Q85291_9VIRU/211-436:0.22783):0.11082):0.25285):0.08435,((V58K_BSMV/265-489:0.19184,Q85079_9VIRU/323-547:0.24191):0.19675,Q83077_9VIRU/188-413:0.27682):0.16796):0.26232):0.84183,Q65674_9VIRU/119-353:0.10161,O72591_9VIRU/117-351:0.14639);