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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01442 - Apolipoprotein)
Apolipoprotein A1/A4/E family
(Pfam reference: accession no. PF01442)
(Interpro reference: accession no. IPR000074)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
21 sequences @ 284 aa
(ave. pairwise identity: 0.30)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 9.61)
nucleotides
(available for above)
19 sequences @ 852 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 5.33)
amino acids, restricted set
(corresp. to available nt seqs)
19 sequences @ 284 aa
(ave. pairwise identity: 0.30)
New Hampshire format
(total tree length: 9.14)