EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01429 alignment
(17 sequences with 456 bp)


MBD1_MOUSE/1-72 ATGGCTGAGTCCTGGCAGGACTGCCCAGCCCTGGGCCCTGGCTGGAAACGCCGAGAGTCCTTTCGAAAGTCAGGGGCCTCGTTT---................................................---------GGACGCTCAGACATCTATTACCAGAGC.................................CCC---ACAGGAGAAAAGATCCGAAGCAAAGTTGAGCTGACTCGGTACTTGGGCCCTGCATGTGAT---------------------------------------.....................------------------------------------------------------------------------------------CTTACCCTGTTTGACTTCAGACAAGGCACCTTATGCCATCCC
Q9PUM9_XENLA/1-71 ATGGAGAAAAAGCGATGGGAGTGCTCGGCTCTC---CAGGGCTGGAAAAAGGAGGAGGTTACTCGAAGGTCTGGCCTCTCCGCC---................................................---------GGCAAGAGCGATGTCTATTACTATAGC.................................CCA---AGTGGGAAGAAATTCCGCAGTAAGCCTCAGCTTGCTCGTTACTTAGGAAACTCCATGGAT---------------------------------------.....................------------------------------------------------------------------------------------CTCAGCACATTTGACTTTCGTACAGGAAAAATGCTCATGAGC
Q9YGC6_XENLA/91-166 GACAGGGGTCCCATGTACGAAGACCCCACTCTTCCTGAAGGCTGGACACGAAAACTCAAGCAAAGAAAATCTGGTCGTTCTGCT---................................................---------GGAAAATTTGATGTATATTTAATCAAC.................................CCT---AATGGAAAAGCTTTTCGGTCCAAAGTTGAGCTTATAGCATACTTCCAAAAGGTAGGGGAC---------------------------------------.....................------------------------------------------------------------------------ACATCTCTAGACCCTAATGATTTTGACTTCACTGTAACTGGGAGAGGGAGCCCG
MBD4_HUMAN/76-151 GCTACTGCAGGAACAGAATGCCGTAAGTCTGTCCCATGTGGATGGGAAAGAGTTGTGAAGCAAAGGTTATTTGGGAAGACAGCA---................................................---------GGAAGATTTGATGTGTACTTTATCAGC.................................CCA---CAAGGACTGAAGTTCAGATCCAAAAGTTCACTTGCTAATTATCTTCACAAAAATGGAGAG---------------------------------------.....................------------------------------------------------------------------------ACTTCTCTTAAGCCAGAAGATTTTGATTTTACTGTACTTTCTAAAAGGGGTATC
Q9SNC0_ARATH/25-137 AAACGTGCGACGCCAGGGGATGATAATTGGCTTCCTCCTGATTGGAGAACCGAAATTAGGGTTCGAACCTCTGGCACTAAAGCT---................................................---------GGTACTGTTGATAAGTTCTACTACGAA.................................CCGATTACGGGTCGTAAGTTCCGGTCCAAGAACGAGGTTTTGTACTATTTGGAACACGGGACG---CCTAAAAAGAAGTCCGTCAAGACAGCGGAAAACGGAGAC.....................TCACATTCCGAACATTCTGAAGGTAGAGGAAGCGCTAGGCGGCAGACAAAATCCAACAAAAAGGTTACTGAGCCACCGCCAAAGCCGTTGAACTTCGATTTTCTGAATGTGCCGGAGAAGGTTACT
Q9VGA4_DROME/445-519 AAACCCACTGTTATCGTGCAGGATTGGCGTCTGCCTCCTGGCTGGATCAAGCACATGTACCAGCGGTCC------------------................................................AACGTCCTCGGCAAGTGGGATGTTATTCTGGTCTCG.................................CCC---AGCGGCAAACGTTTCCGCTCCAAGTCCGACTTGAAGTTGTTCCTTGAGTCCCAGAATCTG---------------------------------------.....................---------------------------------------------------------------------GTCTACAACCCGGATGTGTACGACTTTAGCATCCATCGACGTCGTGCCAAAGACATC
Q9VHB7_DROME/9-100 ATCGAGCGCAAACGCGTCGACTGCAGTGTCCTGCCAAAGGGATGGCAGCGCGACGAGGTC---CGAAAGTCCGGCAGCAGCGCCAATaacaacgccagcagcaacaacaacagcagtgccacagccagcagcaacAACAACAATAACAAGGTGGATGTTTTCTACTACAGT.................................CCC---ACAGGAAAAAGGGCGGAGGGAAAGCCACAGGACATTGCAATCCCTGATTTCCAG---------------------------------------------.....................---------------------------------------------------------------------------CCTGGCAAAATGCCGCACTGCGCCCTGCCCTCGCCCTCCATTTCGCTGTAC
Q9V424_DROME/9-126 ATCGAGCGCAAACGCGTCGACTGCAGTGTCCTGCCAAAGGGATGGCAGCGCGACGAGGTC---CGAAAGTCCGGCAGCAGCGCCAATaacaacgccagcagcaacaacaacagcagtgccacagccagcagcaacAACAACAATAACAAGGTGGATGTTTTCTACTACAGCcgagccctgcgcactgatgtctccctggtgcctCCC---ATTCGACAGACTGCCTCGATCTTCAAGCAACCGGTGACGGTGATTCGCAACCATAAACAG---------------------------------------.....................------------------------------------GATCCCGCCAAAGCGAAGAATGAACCCAAGCATGGCACTCGGGAGAAGCCGAAACAGCTGTTCTGGGAGAAGCGACTGGAACGACTACGC
O49655_ARATH/104-177 TGGGTCATCGACAAGCCTGGCTTGCCGAGGACACCAAGAGGGTTCAAAAGGAGCTTAATTCTGAGAAAGGAT---------------................................................------TACTCGAAAATGGATGCGTACTACATAACT.................................CCT---ACTGGGAAGAAGCTCAAGTCTCGTAATGAAATCGCAGCCTTCATCGATGCCAATCAGGAT---------------------------------------.....................---------------------------------------------------------------------TACAAGTATGCACTGCTTGGAGATTTCAATTTCACAGTCCCAAAGGTGATGGAAGAG
Q9SLR5_WHEAT/1-107 ------------------AATCCAGACGGGCTACCGAAAGGATGGGTGAAAGAATTGGTATTTAGAAAGTGCAACGATGGA------................................................---------ATTAGAAAAGACCCGTACTATACTGAT.................................CCTGTCAGTCATCTTCTATTCCGAACACTGAAATCTGTAATAAGCTACCTTCAGACGGGAGAAATAAGTAGACATGCCTATCTTCCAAGAAGAAGTGTCACAGAC.....................ATTTACTCTTTCGATGGGTGTGCAGATCTGCCTCGAAAAATGCTGAAGCGATTGAAAGTACCAGGGAAGAAAAAACAAAAATCTGTGCAATCGTTGGTCTTCGAAAAGAAATTACCTGATGACCAG
Q9VCG5_DROME/35-106 AGGAAGACGGCCACTAGCTACAATGGAAATTTGGCCCCCGGCTGGCGTCGCTTGACC------------------------------................................................---------AACAACAATGAGGTGGCCTATATCAGC.................................CCC---TCGGGCAAAACGCTGCGCACGCAGTTCCAGATCAAGGACTATCTGCTCACACAGGGTACC---------------------------------------.....................---------------------------------------------------------TGCAAGTGCGGCCTGCCGTGTCCGCTGCGCCCGGAGTATCTATTCGACTTTAATGCACAGGTGCCCAAC
SETB1_HUMAN/594-668 TACCGGGGCAAGAACCCTCTGCTGGTCCCGTTACTATATGACTTCCGGCGGATGACAGCCCGGCGTCGAGTTAACCGCAAGATG---................................................------------GGCTTTCATGTTATCTATAAGACA.................................CCT---TGTGGTCTCTGCCTTCGGACAATGCAGGAGATAGAACGCTACCTTTTCGAGACTGGC------------------------------------------.....................---------------------------------------------------------------------TGTGACTTCCTCTTCCTGGAGATGTTCTGTTTGGATCCATATGTTCTTGTGGACCGA
YNCA_CAEEL/824-900 TTCCATCGAAATTCACCAATACATACTCCTCTTTTGTGTGGTTGGAGACGAATTATGTACACAATGAGTACTGGAAAGAAGCGG---................................................---GGAGCAGTGAAGAAAAACATTATTTACTTTTCT.................................CCA---TGCGGAGCCGCTCTTCACCAGATCAGCGACGTCTCTGAATATATTCATGTCACCAGAAGT---------------------------------------.....................---------------------------------------------------------------------------TTATTGACGATTGATTGTTTTTCATTTGATGCACGAATCGATACTGCCACT
BAZ2A_HUMAN/519-593 ATTGCTACCCCAGAAGAAGTTCGTCTTCCCCTCCAACATGGGTGGCGGAGAGAGGTGCGCATCAAGAAG---GGCAGCCACCGATGG................................................------------CAGGGGGAGACCTGGTATTATGGC.................................CCC---TGTGGGAAGAGGATGAAGCAATTTCCAGAAGTGATCAAGTACCTGAGCCGCAACCTG------------------------------------------.....................---------------------------------------------------------------------GTACACAGTGTCCGCCGAGAGCACTTCAGCTTCAGTCCCCGTATGCCTGTTGGAGAT
BAZ2B_HUMAN/543-617 GTAACAGATGAACGTGAACTGCGTATTCCATTGGAATATGGCTGGCAGAGAGAGACAAGAATAAGAAACTTTGGAGGGCGC------................................................---------CTTCAAGGAGAAGTAGCATATTATGCT.................................CCA---TGTGGAAAGAAACTTAGGCAGTACCCTGAAGTAATAAAGTATCTCAGCAGAAATGGA------------------------------------------.....................---------------------------------------------------------------------ATAATGGATATCTCAAGGGACAATTTCAGCTTCAGTGCAAAAATAAGAGTGGGTGAC
Q9SGH2_ARATH/258-374 AGGCATTTCATATCTGAAAGGCATGGAGTATTGGAAGATGGCTGGCGTGTCGAATTCAGACAACCTTTAAATGGT------------................................................---------TATCAGTTATGTGCAGTGTATTGTGCT.................................CCG---AATGGAAAAACATTTAGTTCAATACAAGAAGTTGCTTGTTATCTGGGCTTGGCAATTAATGGTAACTACAGCTGTATGGATGCTGAAATCAGGAATGAGaattctcttcttcaagaaagaTTGCATACGCCCAAGAGAAGAAAGACATCAAGATGGCCAAACAATGGTTTCCCTGAGCAAAAGGGTAGTTCAGTGAGTGCTCAACTCAGGCGTTTTCCATTCAATGGTCAGACCATGTCTCCTTTC
Q9XI36_ARATH/4-77 ACAGACGAGCTTGTCTCCATTGAGCTACCAGCTCCAGCTTCATGGAAGAAACTGTTTTATCCGAAAAGAGCCGGTACTCCG------................................................---------AGAAAGACGGAGATTGTGTTTGTGGCT.................................CCA---ACGGGTGAAGAGATTAGCTCGCGGAAGCAGTTGGAGCAGTACCTGAAGGCCCATCCTGGC---------------------------------------.....................---------------------------------------------------------------------------AATCCTGTCATCTCTGAGTTTGAGTGGACAACTGGGGAAACTCCAAGGAGG