EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01406 alignment
(11 sequences with 1326 bp)


SYC_YEAST/49-475 TTCATTCCGCAATCTGGCAATAGAGGTGTCACTTGGTACTCTTGCGGTCCTACTGTTTACGATGCCTCCCATATGGGTCATGCCAGAAACTATGTCTCTATTGATATCAATAGAAGAATTATTCAAGATTATTTTGGTTACGACGTGCAATTTGTGCAAAATGTTACTGATATCGACGATAAAATTATTTTGAGAGCTAGACAAAACTATTTATTTGACAATTTTGTCAAAGAAAATGATACC...AAATTCAACGCCACTGTTGTTGACAAGGTCAAAACCGCACTTTTCCAATATATCAACAAAAATTTTACTATTCAAGGCAGCGAGATCAAAACTATCGAAGAATTTGAAACTTGGTTATCGAATGCTGATACTGAAACTTTAAAATTGGAGAATCCTAAATTCCCTATGCATGTCACCGCAGTTCAAAATGCTATTGAATCAATCACTAAGGGCGATTCCATGGACGCAGAAGTTGCCTTTGAAAAAGTCAAGGACGTTACGGTTCCTCTATTGGATAAAGAATTGGGCTCTACCATTAGCAATCCAGAGATTTTCCGCCAACTTCCAGCTTACTGGGAACAGAAATTCAATGATGACATGTTATCATTAAACGTGCTACCTCCCACCGTTACAACTCGTGTTTCTGAGTACGTTCCAGAAATTATTGACTTTGTTCAAAAAATTATTGATAATGGTTACGCATATGCCACTTCCGACGGTTCCGTGTACTTTGATACTTTAAAATTTGACAAATCCCCAAATCATGACTATGCTAAATGCCAGCCATGGAATAAGGGCCAGTTAGACTTAATTAATGATGGTGAAGGGTCCTTAAGCAACTTTGCTGATAACGGAAAAAAGTCGAATAATGATTTTGCTTTATGGAAGGCTTCCAAGGCAGGTGAA.........---CCTGAGTGGGAATCACCATGGGGTAAGGGTAGACCAGGATGGCATATTGAATGTTCTGTGATGGCCAGTGATATCCTAGGC...............TCTAACATCGATATTCATTCAGGTGGCATCGATTTGGCCTTTCCTCACCATGATAACGAATTGGCTCAATCCGAGGCTCGCTTCGACAATCAACAGTGGATCAACTATTTCTTACATACGGGCCATTTACATATT------------GAGGGTCAAAAAATGTCTAAATCCTTAAAGAATTTCATTACCATTCAAGAAGCTTTGAAAAAATTCTCACCGCGCCAATTAAGATTGGCTTTT...GCCTCAGTACAATGGAACAATCAATTGGATTTCAAGGAATCTTTGATCCATGAAGTAAAGTCA
SYC_SCHPO/34-456 TTTGTTTCAAATGGTTCCAAC------TTAACATGGTACTGCTGTGGACCTACGGTATATGATGCTAGTCATATGGGGCATGCTCGTAATTATGTGACAACTGATATCCTTCGAAGAATCTTACAATCTTATTTTGGATATAACATTACATTTGTACAAAACGTTACTGATATAGATGACAAAATTATCCTTAGAGCTCGTCAACAATATTTATTTGAAGAATATAAAAAGCAGCAAGGTACTaacAAATCCCATTCAGAAGCTCGTGAAAAGGTTACTGAGGCTTGGTTTGCATATGCCAAGAAAAATCTTCCTGAACCTCCCTCCTCGATGAGTGAATGGCCTCAATGGCTCGCATCCCATGATATTCCCACTTTAGCTATCAACAATCCCAAGTTACCCATGCATGTGGATGCTTTAAAGTCTGCTTTGGACGCTCTTCAGGTGAGTGAAGCTTCTGAAATCATTTCTTTGGATGGGTTTTGGCCCAAGGTACAAGATGTTTTGGTCCCATTGCTTGATGCAGAATTGGGTAGCACCGTGACTGATCCTGCAATCTTTCGTAAACTTGCAGCTTATTGGGAAGATGACTTCAACAAGGACATGGCTAATCTGAATGTCTTGCCACCTACTGCTGTTACGCGAGTTTCGGAATATGTTCCTGAAATCGTAGATTTTGTTCAGCGCATTATCGATCGCGGTTATGCTTATCCAGTTACAGACGGTAGCGTTTACTTCGACACAGAGGCTTTCGAAAAAGGT---GGTCATTTTTATGCTAAATTGGAGCCCTGGAATAAAGGAAATCGAGAGTTAATTGCTGAGGGCGAGGGTTCCTTGGCT------GCTCTCACCGGTAAAAAGCGTCCGGGAGACTTTGCGCTTTGGAAGGCCAGTAAACCTGGTGAA.........---CCCTCTTGGGATAGTCCTTGGTCCAAAGGACGTCCTGGTTGGCATATCGAATGTTCTGTCATGGCTAGCGCTCTACTTGGT...............TCCAATATTGATATTCACTCTGGTGGAATTGATTTGGCATTCCCTCATCACGATAATGAGTTGGCACAAAGTGAGGCCTATTTTGACTGTCCCCAATGGGTGAATTATTTCTTTCATGCAGGTCATTTGCATATT------------GAAGGCCAGAAAATGTCTAAATCTCTTAAAAATTTTATCACTATTAAAGAAATTTTAAAGAAGTTTACACCTAGACAATTACGCTTGGCATTC...TTACTTCAACAATGGAACACTCAACTCGATTTTAAGGAGACCCTTTTGGCATATGTCTTAAAC
SYC1_MYCTU/19-315 GATTTCGTCCCGTTGCGACCTGGACACGTCTCGATCTACCTGTGCGGTGCCACGGTGCAGGGCCTACCGCATATCGGGCATGTCCGCAGCGGGGTCGCCTTCGACATCCTGCGCCGATGGTTGCTCGCG---CGTGGCTACGACGTCGCGTTTATCCGCAACGTGACCGACATCGAAGACAAGATCCTGGCCAAGGCCGCCGCGGCGGGCCGGCCG---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGGGAGTGGGCGGCTACCCACGAGCGTGCCTTCACCGCGGCCTACGACGCTCTGGACGTCTTGCCGCCGTCCGCGGAGCCGCGCGCCACCGGGCATATCACCCAGATGATCGAGATGATCGAGCGCCTGATCCAGGCCGGCCACGCGTATACCGGTGGC------------------GGTGACGTTTACTTCGACGTTCTGAGCTACCCGGAGTACGGCCAGTTATCCGGTCACAAGATCGATGACGTCCATCAGGGCGAAGGTGTGGCTGCCGGC------------------------AAGCGGGACCAGCGCGACTTCACTTTGTGGAAGGGCGAAAAGCCGGGTGAA.........---CCGTCGTGGCCGACGCCGTGGGGCCGCGGGCGTCCGGGCTGGCATCTGGAATGCTCGGCAATGGCTCGCAGCTATCTCGGG...............CCGGAATTCGATATCCATTGCGGTGGAATGGATTTAGTCTTCCCGCATCATGAGAACGAAATCGCCCAGAGCCGCGCCGCCGGTGAT------GGGTTCGCCCGCTACTGGCTGCACAATGGCTGGGTGACGATG------------GGCGGGGAGAAGATGAGCAAGTCGCTGGGCAACGTGTTGTCCATGCCGGCGATGTTGCAGCGGGTGCGGCCGGCTGAGCTGCGTTATTACCTG...GGCAGCGCGCACTACCGGTCGATGCTCGAGTTCTCCGAGACCGCTATGCAGGATGCGGTGAAA
SYC_SYNY3/15-320 CCCCTGCAACCTCTCCACCCTGGCCTGGTGACAATGTACTGTTGCGGCATCACCGTCTATGACTATTGCCACCTAGGCCACGCCCGTACCTGCATTACCTGGGATTTGGTGCGTCGTTACCTGCAATGG---TCGGGTTATGAGGTGCGCTATGTGCAAAATTTCACTGATATTGACGACAAAATCCTCAAACGGGCAGTGGACGAAAGCTCCACC---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAGGCGGTGTCAGAAAAATTTATCGCCGCCTATTTTGAAGATATGGAAGCGTTGGGAGTGCAACCAGCGGATCTTTACCCCAGGGCTACCCACACCCTAGATGGCATTAAAAGGTTAATTGCGGAGTTGGAAGCTAAGGGCTACGCCTATCCCAGCGGT------------------GGAGATGTCTATTACTCAGTGCGTAATTTTGACGGCTACGGCAAGCTCTCTGGACGCAGGCTAGAGGATTTGCAGGCGGGGGCCAGCGGCCGGGTGACAGTGGCCGATCCCGATGGAGCCCAAAAACAGGACCCGTTTGATTTCGCCTTATGGAAAAGCGCTAAACCGGGGGAA.........---CCGGCCTGGGAATCTCCTTGGGGTAAGGGGCGGCCGGGCTGGCACATTGAATGTTCCGCCATGGTGAGGGAATTTTTAGGG...............GAAACTATTGATCTACATGTGGGGGGCAATGATTTAATTTTTCCCCACCACGAAAATGAAATTGCCCAATCGGAGGCGGTGACGGGT---CAACCCCTGGCCCAGTATTGGCTCCATAACGGCATGGTGAAGGTA------------GATGGAGAAAAAATGTCCAAATCCCTGGGGAACTTCACCACCATTCGGGCTTTGCTAAAAACCGTTGACCCCATGGCAATCAGACTTTTGGTT...CTCCAAGGTCATTACCGTAAACCGCTAGATTTCACCGAGACGGCGATCGCCGCCGCCACTAAT
SYC_BACSU/15-314 ACATTCGTTCCTCTTGAAGAGGGAAAAGTGAAAATGTATGTATGCGGACCCACGGTTTACAATTACATTCATATCGGGAACGCGCGTCCGGCAATCGTTTACGATACGGTTCGAAACTATTTAGAGTAT---AAAGGCTATGATGTGCAGTATGTCTCTAACTTCACAGACGTAGACGATAAATTAATTAAAGCGGCAAATGAACTCGGTGAGGAT---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTACCCACCATTTCAGAGCGTTTTATTAAAGCATACTTTGAAGACGTAGGTGCGCTCGGCTGCCGAAAAGCCGACCTTCATCCGCGAGTAATGGAGAACATGGATGCCATTATCGAATTCGTAGATCAGCTCGTGAAAAAGGGCTACGCATATGAATCAGAA------------------GGTGACGTATATTTCAAAACCAGAGCATTTGAAGGGTACGGAAAGCTTTCTCAGCAATCAATCGATGAACTAAGATCAGGTGCACGCATCCGGGTC------------------GGCGAGAAAAAAGAAGATGCTCTTGATTTCGCACTGTGGAAAGCGGCAAAAGAAGGAGAA.........---ATCTCTTGGGATAGCCCTTGGGGGAAAGGGCGTCCGGGCTGGCACATTGAATGCTCAGCAATGGTGAAAAAGTATCTCGGT...............GACCAGATTGATATCCATGCGGGCGGACAGGATTTAACATTCCCTCACCATGAAAACGAAATTGCGCAATCTGAGGCGCTGACAGGC---AAAACGTTTGCGAAGTACTGGCTTCATAATGGTTATATCAATATT------------GATAATGAAAAAATGTCAAAATCACTAGGCAACTTTGTGCTTGTGCATGACATCATTAAACAGCATGATCCGCAGCTTTTGAGATTCTTTATG...CTATCTGTTCATTATCGCCATCCGATTAACTATTCAGAAGAGCTTCTGGAGAATACGAAAAGC
SYC_HAEIN/14-314 ATCTTTAAACCTATCCACGAAAATAAAGTGGGAATGTATGTTTGCGGCGTCACTGTTTATGATTTGTGCCATATCGGCCATGGACGCACTTTTGTGTGTTTTGATGTGATTGCCCGTTATTTACGTTCT---TTGGGTTACGATTTAACTTATGTGCGTAATATAACGGACGTAGATGACAAAATTATTAAACGTGCGTTAGAAAACAAAGAAACC---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGATCAGTTAGTGGATCGCATGGTGCAGGAAATGTATAAAGATTTTGATGCACTTAATGTCTTACGCCCTGATTTTGAACCTCGTGCGACGCATCATATTCCAGAAATTATTGAAATTGTGGAAAAATTAATTAAACGCGGACATGCTTATGTTGCGGATAAT---------------GGGGACGTGATGTTTGATGTAGAAAGCTTCAAAGAATACGGCAAATTATCCCGTCAAGATCTTGAGCAATTACAAGCTGGCGCACGTATTGAAATCAAT------------------GAAATCAAGAAAAATCCAATGGATTTCGTGCTTTGGAAAATGTCGAAAGAAAACGAA.........---CCAAGTTGGGCTTCCCCTTGGGGGGCAGGTCGTCCGGGTTGGCATATTGAATGTTCTGCAATGAACTGCAAACAGCTTGGC...............GAATATTTTGATATTCACGGTGGTGGCTCTGATTTAATGTTCCCTCACCACGAAAATGAAATTGCACAATCTTGCTGTGCGCATGGC---GGCCAATATGTGAATTATTGGATCCATTCTGGCATGATTATGGTG------------GATAAAGAAAAAATGTCGAAATCCCTCGGCAATTTCTTCACAATTCGTGATGTATTAAACCACTACAATGCAGAAGCGGTGCGTTATTTCTTA...TTAACGGCACATTATCGTAGCCAGCTCAATTATAGCGAAGAAAACTTGAATTTAGCACAAGGT
SYC_ECOLI/14-314 GAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGATCTCTGTCATATCGGTCACGGGCGTACCTTTGTTGCTTTTGACGTGGTTGCGCGCTATCTGCGTTTC---CTCGGCTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACGCGCCAATGAAAATGGCGAAAGC---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGGTCACGCTTATGTGGCGGACAAC---------------GGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTC------------------GACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAA.........---CCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGT...............AACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGAT---GGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTT------------GACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTG...ATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTGCG
SYC_ARCFU/14-316 CTTGAGGATATTGTGGATGGCAAAAGGGTGAAGATGTACGTTTGCGGTATCACAGCTTACGATTACTCCCACATCGGCCACGCGAGGAGTGCCGTGTTTTTCGACGTTTTCAGGAGGTATTTGGAGTAT---CTCGGATATGAGGTAGTATATGTTCAGAACTTCACGGATGTGGATGACAAGATCATCAACAGGGCCGTTAAGGAGGGCAAGACG---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAGAAGTGGCGGAAAAGTTCATTGAGGAATATCTGAAGGACATGGAGGCTTTAAACGTAAAAAAGCCAACGTATCAGCCTAAGGTTACGGAGCACATCCCCGACATAATTGAGTTTATCCAGAATTTGATTGAAAAGGGCTACGCATACGTAATTGAT------------------GGGGATGTTTACTTCCACGTGCCAGCCTTTGAGCACTACGGCGAGCTATCGAAGCAAAGTCTTGAAGAGCTAAACAGGCACAGAATAGAGCCGGAT---------------------GAGAGGAAAAGGGACGTGAAGGATTTTGCCCTCTGGAAGTCCGCGAAAGAGGCTGATttaaaggctCAGGCTGTTTTCGACTCTCCTTGGGGCAGAGGAAGGCCGGGGTGGCACATAGAGTGCAGCGTCATGTCGGCCAAGTATCTGGGA...............GTGCCTTTCGACATCCACGGCGGGGGGAAGGACTTGATATTCCCCCACCACGAAAACGAGAGGGCTCAGAGCTTTGCGAGATTCGGG---GTGGAGCCTGTTAAAATCTGGGTGCACAACGACTTCATAAGGATA------------AAAGGGGAAAAGATGAGCAAAAGCCTGGGAAACATAGTCAGGATTAGGGATGTGCTTCAGAGGTACGAAGGAGAGGTGCTCAGATACTTTCTG...CTCACAGCCCACTACCGCAGCCCTCTCGACTACACCGAAGAGGCACTTGAGAGGGCGAAGAGG
SYC_HELPY/13-317 CCTTTTGAGCCTTTAGTCCAAAATAAGGCGAATATTTATGTGTGCGGGCCTACGGTGTATGATGACGCTCATTTAGGGCATGCCAGGAGCGCGATTGCTTTTGATTTGTTAAGGCGCACGCTTGAATTG---AGCGGCTATGAAGTGATGCTAGTAAGGAATTTCACAGATATTGACGATAAGATCATCAACAAAGCCCTAAAAGAAAACAAAAGC---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGAATTAAGCAGCATTTATATTGAATCTTACACGAGGGATTTGAACGCTTTGAACGTGAAAAAACCCAGCCTAGAGCCTAAAGCGAGCGAGTATTTAGACGCTATGGTGGGCATGATTGAAACGCTTTTAGAAAAAAATATCGCTTATCAGGTCTCTAAT---------------GGGGATATTTATTTAGACACGAGCAAGGATAAAGATTACGGCTCTTTGAGCGTGCATAATAGCAGC---ATTGAATTTGGCCGTATTGGTTTGGTGCAA---------------------GAAAAACGGCTTGAGCAGGATTTTGTGTTATGGAAAAGCTATAAGGGGGATAAT.........GATGTGGGCTTTGATAGCCCTTTAGGCAAAGGGCGCCCTGGCTGGCATATAGAATGCTCTAGCATGGTTTTTGAAACTTTAGCGctcactaacacccccTATCAAATTGATATCCATGCAGGCGGAGCGGATTTGTTATTCCCCCACCATGAAAATGAAGCGTGCCAAACCCGTTGCGCCTTTGGC---GTGGAGCTTGCCAAATATTGGATGCATAACGGCTTTGTGAATATC------------AATAACGAAAAAATGTCTAAAAGTTTGGGGAATAGCTTTTTTGTTAAAGACGCTCTCAAAAACTATGATGGCGAAATTTTGCGCAATTACTTA...CTAGGGGTGCATTATCGCTCTGTTTTGAATTTCAATGAAGAAGACTTGTTAGTGAGTAAAAAA
SYC_MYCPN/17-310 CAGAGCGTGGTATTAGAACAAAAGCAAATTAACATTTATCTGTGTGGACCGACTGTTTACAATGATTTGCACCTAGGCAATACCCGTCCCTTAATTGTGTTTGATGTGCTACAAAGGGTGTTGCAAGCA---GCGCAGTACAAGGTGCAGTTTGTCCAAAACATCACTGATATTGACGACAAGATTATCAAGATCGCGCAGCAACAGGAAATTAGT---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCGCAGTTGTGCAAACAGCAAATCACCGCTTACAAAAGCTTGTTGAAAAAGCTCAACATTTTGCCG---ATTAAACACCTCCAAGTCACTGATAAAATTGACAAAATGCCCGGTTACATTGCCCGGTTAGTCAAAAAGGGCTTTGCTTACGTTTCGCCTTTG---------------GGCAACACGTACTTTAGTGTAAGCCAATTACCCCAGTATGGTATTTTAGCCAACCGTGTTGTGGAAACAATTGAGGATGAAGCTACTGAC---------------------------------AAACGCAATAAACTGGACTTTGTTTTGTGAAAACAAACGACCGCTGGG---.........---GTAAAGTGAAACAGTCCGTGAGGTTGGGGTCGGCCGGGTTGACACGTGGAGTGTGCCTTTTTAATTGATTACAGCTTTAAA...............GACCAGTTGACAATTCATGGTGGTGGGGTGGATTTGAAGTTTCCCCATCATGAAAACGAAAACGCAATGCATATGGCACTGTATGAC---AAACCATTAACGCAGCATTGGATGCACATTGGCCACTTAATGTTT------------GAAAACCAAAAGATGTCCAAGTCACTGCAAAACTTTCTTTTAGCAGTTGACTTTTTGACAATCCATGACTTTCGCATTTTGCGCTGATTGTTC...TATCAAAAACACTATTACCACCCGTTGGATTTAAGCCAATCTTTAATAGAGCAAGCTTGCAGT
SYC_MYCGE/9-301 AAACCAACAACACTAGTTCAAAAAACCATTAACATTTATCTCTGTGGACCCACAGTTTATAACGATTTGCACTTAGGCAACACCAGACCATTAATTGTTTTTGATGTTTTAAATAGAGTTTTAAAAAAG---GCTAAATATACCGTTAATTTTGTTCAAAACATCACTGATATTGACGATAAGATCATCAAGATTGCTCAACAACAAGAAGTAAGC---------------------------...------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATCAGTTGTTACAAAACAACAAATCACTGCTTACAAATCACTTTTAAAAAAACTAAATATTCTGCCT---ATTAAACATATTCAAATCACTGAAAAAATCGATAAAATCCCTGACTATATTGATCAATTAGTAAATCAAAACCATGCTTATGTTTCAACTCAA---------------AACAACGTTTATTTTGCAGTTAATTCACTAAAGCAATATGGTTATCTAGCTAACCGAATGGTGCAT---TTAGAAGAAACTGATACTGAT---------------------------------AAAAAGAACAAATTGGATTTTGTACTTTGAAAGATTACTACTGCAGGG---.........---ATTAAATGAAATAGTAAGTGGGGACTTGGCAGACCAGGTTGACATGTTGAATGTGCCTTCTTAATTGATTATTGTTTCAAA...............AATGAACTCACGATCCACGGAGGAGGAGTTGATTTAAAGTTCCCCCACCATGAAAATGAAAATGCCTTACACATGGCTTTATATAAC---CAGCCCATTACCAAACATTGGATGCATATTGGTCATTTGATGATT------------GAAAACCAAAAGATGTCAAAGTCATTGCAGAACTTCTTGTTAGCAGTTGATTTTCTTAACTTTCATGATTTTCGTGTTTTGCGTTGGATCTTT...TACCAAAAACACTATTTGCATCCTATTGATCTAAACCAATCATTGATTGAAAAAGCTAATAAT