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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01168 phylogeny
for nucleotide alignment


 
(Y461_VIBCH/3-232,((Y090_HAEIN/2-231,Y112_PASMU/2-231),(Y394_PSEAE/3-225,((Q9PCR1_XYLFA/58-257,Q9K9U5_BACHD/7-225),(Q9EUP5_THETH/3-210,(((Q983H3_RHILO/9-232,(Q9HTM9_PSEAE/28-275,Q983R9_RHILO/19-253)),((YHFX_ECOLI/28-265,((Q9X1T3_THEMA/3-227,Q99S88_STAAM/1-225),Q98B74_RHILO/3-230)),((ALR_STRCO/15-248,(ALR_MYCSM/15-243,ALR_MYCLE/13-241)),(((ALR2_PSEAE/3-219,(((((((((VANT_ENTGA/339-562,VANTG_ENTFA/344-567),ALR2_CLOAB/28-254),((ALR_RICPR/3-224,(ALR_HELPJ/5-236,Q9US35_SCHPO/35-246)),ALR_BORBU/10-234)),(((((ALR_LISMO/8-228,((ALR_LACRE/8-231,ALR_LACPL/9-236),((ALR_LACLA/8-229,ALR_STRPY/8-229),ALR_STRPN/8-229))),((ALR_BACPS/9-231,ALR1_BACSU/9-231),ALR_BACHD/7-234)),ALR2_BACSU/7-236),ALR1_CLOAB/7-233),(ALR1_STAAU/8-230,(ALR_CAMJE/1-211,ALR2_STAAN/2-224)))),(ALR_AQUPY/3-205,ALR_AQUAE/3-205)),(ALR1_SCHPO/3-230,ALR2_SCHPO/3-229)),(ALR1_ECOLI/3-220,(ALR_PASMU/5-223,ALR_HAEIN/5-223))),ALR_NEIMA/3-219),(ALR2_KLEAE/4-218,ALR2_ECOLI/4-218))),ALR1_PSEAE/3-220),((ALR1_RHILO/10-226,ALR3_RHILO/9-225),(ALR_CAUCR/6-226,ALR2_RHILO/24-245)))))),Q9X8T9_STRCO/2-216))))),YPI1_VIBAL/3-232);
(Y461_VIBCH/3-232:0.16435,((Y090_HAEIN/2-231:0.18831,Y112_PASMU/2-231:0.14581):0.19798,(Y394_PSEAE/3-225:0.17420,((Q9PCR1_XYLFA/58-257:0.46280,Q9K9U5_BACHD/7-225:0.45146):0.14328,(Q9EUP5_THETH/3-210:0.32934,(((Q983H3_RHILO/9-232:0.68375,(Q9HTM9_PSEAE/28-275:0.40920,Q983R9_RHILO/19-253:0.41718):0.33666):0.16178,((YHFX_ECOLI/28-265:0.67969,((Q9X1T3_THEMA/3-227:0.31890,Q99S88_STAAM/1-225:0.73480):0.39356,Q98B74_RHILO/3-230:0.23363):0.34865):0.20931,((ALR_STRCO/15-248:0.27012,(ALR_MYCSM/15-243:0.16829,ALR_MYCLE/13-241:0.26143):0.18760):0.14616,(((ALR2_PSEAE/3-219:0.21542,(((((((((VANT_ENTGA/339-562:0.45186,VANTG_ENTFA/344-567:0.40334):0.17160,ALR2_CLOAB/28-254:0.43300):0.08949,((ALR_RICPR/3-224:0.47920,(ALR_HELPJ/5-236:0.35092,Q9US35_SCHPO/35-246:1.00676):0.13044):0.01906,ALR_BORBU/10-234:0.48476):0.06424):0.03882,(((((ALR_LISMO/8-228:0.36859,((ALR_LACRE/8-231:0.30387,ALR_LACPL/9-236:0.24649):0.18993,((ALR_LACLA/8-229:0.31136,ALR_STRPY/8-229:0.27605):0.07710,ALR_STRPN/8-229:0.36456):0.11100):0.03475):0.10029,((ALR_BACPS/9-231:0.30001,ALR1_BACSU/9-231:0.37539):0.05339,ALR_BACHD/7-234:0.31872):0.11458):0.05690,ALR2_BACSU/7-236:0.48126):0.11346,ALR1_CLOAB/7-233:0.45506):0.02854,(ALR1_STAAU/8-230:0.39213,(ALR_CAMJE/1-211:0.49616,ALR2_STAAN/2-224:0.64171):0.10037):0.10882):0.08109):0.14322,(ALR_AQUPY/3-205:0.15446,ALR_AQUAE/3-205:0.22833):0.44689):0.17933,(ALR1_SCHPO/3-230:0.20099,ALR2_SCHPO/3-229:0.21520):0.19184):0.13653,(ALR1_ECOLI/3-220:0.29936,(ALR_PASMU/5-223:0.19843,ALR_HAEIN/5-223:0.18403):0.15620):0.08481):0.22310,ALR_NEIMA/3-219:0.34526):0.18357,(ALR2_KLEAE/4-218:0.10071,ALR2_ECOLI/4-218:0.22990):0.26976):0.07013):0.08268,ALR1_PSEAE/3-220:0.31093):0.15826,((ALR1_RHILO/10-226:0.22995,ALR3_RHILO/9-225:0.13029):0.56357,(ALR_CAUCR/6-226:0.30202,ALR2_RHILO/24-245:0.31854):0.08466):0.09938):0.06849):0.05858):0.10635):0.02781,Q9X8T9_STRCO/2-216:0.68550):0.38356):0.11461):0.20454):0.23312):0.13612,YPI1_VIBAL/3-232:0.21687);