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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01129 alignment
(8 sequences with 346 aa)


NAR2A_RAT/1-275 MPSNICKFFL----------TWWLIQQVTGLTGPLMLDTAPNAFDDQYEGCVNKMEEK-APLLLKEDFNKSEKLKVAWEEAKKRWNNIK-----P-SMSY.---P-KGFNDFHGTALVAYTGS-------IGVDFNRAVREFKENP----GQFHYKAFHYYLTRALQLLSN------GD-CHS-----VYRGT-KTRFHYT-GAGSVRFGQFTSS-SLSKTVAQSPEFFSDDGTLFIIKTCLGVYIKEFSFYPDQEEVLIPGYEVYQKVRTQG---YNEIFLDSPKRKK-SNYNCLYS--------------SAGTRESCVS-----LFLVVLTSLLVQLLCLAEP
NAR2A_MOUSE/1-287 MPSNNFKFFL----------TWWLTQQVTGLAVPFMLDMAPNAFDDQYEGCVEDMEKK-APQLLQEDFNMNEELKLEWEKAEIKWKEIK------NCMSY.---P-AGFHDFHGTALVAYTGN-------IHRSLNEATREFKINP----GNFHYKAFHYYLTRALQLLSD-------QGCRS-----VYRGT-NVRFRYT-GKGSVRFGHFASS-SLNRSVATSSPFFNGQGTLFIIKTCLGAHIKHCSYYTHEEEVLIPGYEVFHKVKTQSVERYIQISLDSPKRKK-SNFNCFYS----GSTQA-ANVSSLGSRESCVS-----LFLVVLLGLLVQQLTLAEP
NAR3_HUMAN/11-293 MLLATMILVD--------------IFQVKAE----VLDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAARK------TQIFL.---P-MNFKDNHGIALMAYISEAQEQTP-FYHLFSEAVKMAGQSREDYIYGFQFKAFHFYLTRALQLLRK--------PCEASSKTVVYRTSQGTSFTFG-GLNQARFGHFTLAYSAKPQAAN------DQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQV--SQE-GAGNNLILQSINKTC-SHYECAFL-------GG-LKTENCIENLEYFQP---IY---VYNPGEKNQKLEDHS
NRT1_CHICK/3-309 LLALRWVLLA--GTLLSTSAASSALQEGDLGSITVIMDMALNSFDDQYLLCEDRMRAR-LQMENITEFSTNIAYAVTWRQAAAEWQKR------WGHLAR.---P-MQLIREQAIALLAYSASS----R-MCTLFNEATRQGGRSHQDYIHSYHFKTLHFFLTQALFALRA----SQPR-CYY-----VYRGVRGIRFMTQ-RGKSVRFGQFTST-SLRKEATV----NFGQDTLFVVKTCYGVPIKQFSFFPSEDEVLIPPFEVFEVINFSN-DRGSVKIQLHSKGKM-STHNCELLKPQGGQWGRGHQEVGLGLSPGLSLP--VLPCRRRVWEGLGHREGDPIP
NARE_CHICK/3-299 EPLLHAILGL--VLLLSTRTDASAARSKKGPIKEVVMDMAPHSFDDQYQGCIDLMEAE-LQELNRTEFA-NETFAEGWRSATEEWQRR------WGRVSS.---P-MVLRQDQAIAVLAYTMEG----E-LYRVFNNATLTAGRSRQHYLSSYPFKTLHFLLSRALHTLQE----SQTQPCHN-----VFRGVRGTRFTAQ-QGTVVRFGQFTSS-SLQKKVAE----FFGLDTFFSVETCYGVPIKDLSTFPGEDEVLIPPFEQFRVTNSTY-TAGRSFIQLRSQGKS-STYNCEFVKEK-----R-CKERPCAFSADKSSP---LP--RSPWPGWAP-LAAPHS
NAR1_MOUSE/3-314 IPAMMSLLLVSVGLRDGVQVQSYSISQLDIFSQETPLDMAPASFDDQYAGCLADMTAA-LPDLNHSEFQANKVYADGWAQANNQWQERRAWGSVWGSLP-.PSPP--GFRDEHGVALLAYTANS----P-LHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLLRS----HRSRGCQQ-----VYRGVHGLRFRPAGPGATVRLGGFASA-SLKNVAAQ----QFGEDTFFGIWTCLGAPIRGYSFFPEEEEVLIPPFETFQVINTSRPTQGPARIYLRALGKR-STYNCEYIKEK-----K-CRSGPCWLGSSAPG--S-ISASCSLLLLLLFLVLSALP
NAR1_HUMAN/3-321 MPAMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAA-LPDLNHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTrPSPPPLGFRDEHGVALLAYTANS----P-LHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLLGS---GQRPPRCHQ-----VFRGVHGLRFRPAGPRATVRLGGFASA-SLKHVAAQ----QFGEDTFFGIWTCLGAPIKGYSFFPGEEEVLIPPFETFQVINASRPAQGPARIYLRALGKH-STYNCEYIKDK-----K-CKSGPCHLDNSAMGQSP-LSAVWSLLLLLWFLVVRAFP
NAR5_MOUSE/6-299 LLMVLSCLSL---------HALWKVRAVPILPLSLV----PDTFDDAYVGCSEEMEEK-AGLLLKEEMARHALLRESWEAAQEAWAHRR-----H-KLTL.--PP--GFKAQHGVAIMVYTNSS----NTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLTRALQLLRGSGGCSRGP-GEV-----VFRGVGSLHFEPKRLGDSVRLGQFTSS-SVDERVAR----RFGNATFFNLRTCFGAPIQALSVFPEEREVLIPPHEVFLVTGFSQ-DGAQSIVTLSSYDQTCSHFNCAYL---GGEKRHGCVSSRAVGQPEAPSTEA--LALQSGKTLLLD------P