EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01096 - TFIIS_C)
Transcription factor S-II (TFIIS)
(Pfam reference: accession no. PF01096)
(Interpro reference: accession no. IPR001222)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 39 aa
(ave. pairwise identity: 0.46)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.61)
nucleotides
(available for above)
6 sequences @ 117 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 2.55)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 39 aa
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 2.81)